BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914193|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_B03.
         (532 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9IBG7|CRIM2_XENLA Cysteine-rich motor neuron 2 protein OS=Xe...    30   5.6  
sp|Q8IUA7|ABCA9_HUMAN ATP-binding cassette sub-family A member 9...    30   7.2  
sp|Q9DGN0|STAG2_XENLA Cohesin subunit SA-2 OS=Xenopus laevis GN=...    30   9.5  

>sp|Q9IBG7|CRIM2_XENLA Cysteine-rich motor neuron 2 protein
           OS=Xenopus laevis GN=crim2 PE=2 SV=1
          Length = 2327

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 258 CMVETLQKMHSMQWSVRHNSCTNV*CLDGNQFCR 157
           CM  T+++ H  +W  + + C +  CL+G   CR
Sbjct: 671 CMDGTVKRKHGEEWKPQGDPCQSCRCLEGRVQCR 704


>sp|Q8IUA7|ABCA9_HUMAN ATP-binding cassette sub-family A member 9
           OS=Homo sapiens GN=ABCA9 PE=2 SV=1
          Length = 1624

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
 Frame = -3

Query: 242 CKRCTACNGVYVTTHVPMYSALMGTSFVGSTPY--FLSTLKSPLSTYVTPYN--LVPLSD 75
           C+R  A  GV    +    +AL+G S  G T     LS L  P S  VT YN  L  ++D
Sbjct: 494 CERVEALKGVVFDIYEGQITALLGHSGAGKTTLLNILSGLSVPTSGSVTVYNHTLSRMAD 553

Query: 74  KDN 66
            +N
Sbjct: 554 IEN 556


>sp|Q9DGN0|STAG2_XENLA Cohesin subunit SA-2 OS=Xenopus laevis
           GN=stag2 PE=1 SV=1
          Length = 1194

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 11/63 (17%)
 Frame = +1

Query: 229 VHLLQCLHHTICKLLHKHS----------GLFPKGKIF-NIREHFLTVVLTPYQKEAEST 375
           VH LQC H+ I   L K S           L  + ++F  I +H+LT V T  +++A + 
Sbjct: 662 VHALQCTHYVILWQLAKFSETGSSKEELITLKRQMRVFCQICQHYLTNVNTAVKEQAFTI 721

Query: 376 ICD 384
           +CD
Sbjct: 722 LCD 724

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914193|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_B03.
         (532 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0N1D0|B0N1D0_9FIRM Putative uncharacterized protein OS=Clost...    35   2.4  

>tr|B0N1D0|B0N1D0_9FIRM Putative uncharacterized protein
           OS=Clostridium ramosum DSM 1402 GN=CLORAM_00340 PE=3
           SV=1
          Length = 249

 Score = 35.0 bits (79), Expect = 2.4
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
 Frame = -3

Query: 230 TACNGVYVTTHVPMYSALMGTSFVGSTPY--FLSTLKSPLS--TYVTPYNLVPLSDKDN* 63
           TA NGV ++ +   ++ +MGTS  G T     LST+    S    +   N+V LSDK+  
Sbjct: 23  TALNGVSISVNKGTFACIMGTSGSGKTTLINILSTIDEATSGKLLIFDQNIVGLSDKEKA 82

Query: 62  QVTTRY 45
            +  RY
Sbjct: 83  NIRKRY 88