BP914194 [AcEST]

BP914194
Clone id	YMU001_000056_B04
Library	YMU01
Length	490
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000056_B04.
Accession	BP914194
Tissue type	prothallium
Developmental stage	-
Contig ID	CL2665Contig1
Sequence	AAAAGACGATTCTGTTCGAAGCTGAAATCGCTGCAGAAGGCCTACAAGGTGCTGTAAGGG TTTAGGAAATGAGAAACTGGTTTCTGTAATCGTCAGAAGCATTGCACTTCAACTCTTTTG ATGCTGCATGTTTTCAGCGTTTTATGATGGAAATCGTAGAAAAGGCTTATAAATTTCTGA TGTTCTAGGTATAGCCTAGGTAATCCAGTCTACTATCATGAAATTACTGAAGTTTTACAT GCACATGATCCATATTCTCTGCGTAATGATTTGCTCGCTACATACGCTTTTAGCCGTTGC CTAATTTTGGTGCATGAATAATAACATATTGATATAGAAACGCATCGCATATTGGTGAAG GAGAGACACATTACTTGCAAGGCTTCATTCTTGCAAGTTCAAGTATTTGAGGAACCAGCA TTGAAATTGTATTATTGGTTCTGTAAATCTTTTTAGTCCAATGCCTCGAATTGGAAAAAA AAAAAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q7Z2Q7
Definition	sp\|Q7Z2Q7\|SYNLE_HUMAN Synleurin OS=Homo sapiens
Align length	48
Score (bit)	30.8
E-value	3.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP914194\|Adiantum capillus-veneris mRNA, clone: YMU001_000056_B04. (474 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q7Z2Q7\|SYNLE_HUMAN Synleurin OS=Homo sapiens GN=UNQ1891/PRO43... 31 3.2 sp\|P49396\|RS3A_BRARA 40S ribosomal protein S3a OS=Brassica rapa ... 30 5.4 >sp\|Q7Z2Q7\|SYNLE_HUMAN Synleurin OS=Homo sapiens GN=UNQ1891/PRO4337 PE=2 SV=1 Length = 622 Score = 30.8 bits (68), Expect = 3.2 Identities = 18/48 (37%), Positives = 26/48 (54%) Frame = -2 Query: 389 NEALQVMCLSFTNMRCVSISICYYSCTKIRQRLKAYVASKSLRREYGS 246 NEA ++ L+F + CV I Y + +Q+LKA S+ R EY S Sbjct: 525 NEAFDIL-LAFFILACVLIIFLIYKVVQFKQKLKASENSRENRLEYYS 571 >sp\|P49396\|RS3A_BRARA 40S ribosomal protein S3a OS=Brassica rapa GN=RPS3A PE=2 SV=2 Length = 262 Score = 30.0 bits (66), Expect = 5.4 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Frame = -2 Query: 398 TCKNEALQVMCLSFTNMRCVSIS-ICYYSCTKIRQRLKAYVASKSLRREYGSCACKTSV 225 T N L++ C++FT R + CY ++IRQ +++ + ++ E SC K V Sbjct: 129 TTDNYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQ-IRSKMREIMIKEEASSCDLKELV 186
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP914194\|Adiantum capillus-veneris mRNA, clone: YMU001_000056_B04. (474 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****