BP914200
Clone id YMU001_000056_B12
Library
Length 523
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000056_B12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGCTTCGGAAAGGCGGAATATACATGCATACGAGGTGGTTCTGTTGTCATTTGACCCTAG
CCAAGGCGGGGCTTCTTGCCGAAAGGTGTAAATTTGCAGATAGTTAAGAAGAGGTCATGG
AAGCCTTTAATAGCAATCGCTGTGTAAAATGCCCACTGTAAGGATGTGTGTTCTCGAGGG
CAAGGTATAGGCCAGATTTGGCATTGAGTTTTTCAACCAGTTTTGTTTTTTTTTCCCTTT
CAAATTGAGAACTGCGAACCATCTGAGATGGGTTGTCATCGTGTTATGTGGAAACAATTT
TGGCATTAGTTTCCATGATAAGGCTGAGCAGAGTGGGATAGATGGTTTTCTTTCACTCGC
ACAAAAGTGAGTACTTTCAAAACCTGAAATTTGAGGTGGATTATTCACGTTGCTTGTAAA
GGCTTCTTGTTTCATATTGTAATGAGATAAATTTTGTTTCACTTCACTATGTGATCAAGC
AAGGCACTTAAGTATGGCTTCATTGCCAGTATGCTTTTGGTTA
■■Homology search results ■■ -
sp_hit_id P28824
Definition sp|P28824|NRP1_XENLA Neuropilin-1 OS=Xenopus laevis
Align length 43
Score (bit) 32.3
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914200|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_B12.
(523 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P28824|NRP1_XENLA Neuropilin-1 OS=Xenopus laevis GN=nrp1 PE=2... 32 1.4
sp|Q9VKH0|COG8_DROME Conserved oligomeric Golgi complex subunit ... 31 3.1
sp|Q8WZ42|TITIN_HUMAN Titin OS=Homo sapiens GN=TTN PE=1 SV=2 30 5.3
sp|Q694C5|ABC3G_ERYPA DNA dC->dU-editing enzyme APOBEC-3G OS=Ery... 30 5.3
sp|Q7YR25|ABC3G_CERAE DNA dC->dU-editing enzyme APOBEC-3G (Fragm... 30 5.3
sp|A2ASS6|TITIN_MOUSE Titin OS=Mus musculus GN=Ttn PE=1 SV=1 30 7.0

>sp|P28824|NRP1_XENLA Neuropilin-1 OS=Xenopus laevis GN=nrp1 PE=2
SV=1
Length = 928

Score = 32.3 bits (72), Expect = 1.4
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -1

Query: 268 SQMVRSSQFEREKKTKLVEKLNAKSGLYLALENTHPYSGHFTQ 140
SQ+ SSQ +R +L + ++SG L NTHPY+ + Q
Sbjct: 445 SQITASSQVDRNWVPELARLVTSRSGWALPPSNTHPYTKEWLQ 487


>sp|Q9VKH0|COG8_DROME Conserved oligomeric Golgi complex subunit 8
OS=Drosophila melanogaster GN=CG6488 PE=1 SV=1
Length = 570

Score = 31.2 bits (69), Expect = 3.1
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
Frame = -2

Query: 378 ESTHFCASERKPSIPLCSALSWKLMPKL-------FPHNTMTTHL 265
E F SER+ + LCS L++ L+P + FP ++T HL
Sbjct: 471 EQQAFAGSEREAFVRLCSCLAYDLVPYIQRCIHGVFPPQSLTVHL 515


>sp|Q8WZ42|TITIN_HUMAN Titin OS=Homo sapiens GN=TTN PE=1 SV=2
Length = 34350

Score = 30.4 bits (67), Expect = 5.3
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = -2

Query: 456 QNLSHYNMKQEAFTSNVNNPPQISGFESTHFCASERKPSIPLCSALSWKLMPKLFPHNTM 277
QNL N+ +E T + NP G E T+F RKP+ S ++ + +L N +
Sbjct: 18933 QNLKVTNVTKENCTISWENPLDNGGSEITNFIVEYRKPNQKGWSIVASDVTKRLIKANLL 18992

Query: 276 TTHLRWFAV 250
+ +F V
Sbjct: 18993 ANNEYYFRV 19001


>sp|Q694C5|ABC3G_ERYPA DNA dC->dU-editing enzyme APOBEC-3G
OS=Erythrocebus patas GN=APOBEC3G PE=3 SV=1
Length = 383

Score = 30.4 bits (67), Expect = 5.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2

Query: 471 HSEVKQNLSHYNMKQEAFTSNVNNPPQISGFESTHFC 361
H+ + + L H M FTSN NN P +SG T+ C
Sbjct: 186 HATLGELLRHV-MDPGTFTSNFNNKPWVSGQRETYLC 221


>sp|Q7YR25|ABC3G_CERAE DNA dC->dU-editing enzyme APOBEC-3G
(Fragment) OS=Cercopithecus aethiops GN=APOBEC3G PE=1
SV=1
Length = 377

Score = 30.4 bits (67), Expect = 5.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2

Query: 471 HSEVKQNLSHYNMKQEAFTSNVNNPPQISGFESTHFC 361
H+ + + L H M FTSN NN P +SG T+ C
Sbjct: 186 HATLGELLRHV-MDPGTFTSNFNNKPWVSGQRETYLC 221


>sp|A2ASS6|TITIN_MOUSE Titin OS=Mus musculus GN=Ttn PE=1 SV=1
Length = 35213

Score = 30.0 bits (66), Expect = 7.0
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = -2

Query: 456 QNLSHYNMKQEAFTSNVNNPPQISGFESTHFCASERKPSIPLCSALSWKLMPKLFPHNTM 277
QNL N+ +E T + NP G E T+F RKP+ S ++ + +L N +
Sbjct: 19795 QNLKVSNVTKENCTISWENPLDNGGSEITNFIVEYRKPNQKGWSIVASDVTKRLVKANLL 19854

Query: 276 TTHLRWFAV 250
+ +F V
Sbjct: 19855 ANNEYYFRV 19863


tr_hit_id Q8I2U1
Definition tr|Q8I2U1|Q8I2U1_PLAF7 Putative uncharacterized protein PFI1040c OS=Plasmodium falciparum (isolate 3D7)
Align length 54
Score (bit) 35.0
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914200|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_B12.
(523 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8I2U1|Q8I2U1_PLAF7 Putative uncharacterized protein PFI1040c... 35 2.2
tr|Q97L30|Q97L30_CLOAB Possible glucanotransferase (Putative end... 35 3.0
tr|A7Q5Y4|A7Q5Y4_VITVI Chromosome chr14 scaffold_54, whole genom... 34 5.1
tr|A2GY81|A2GY81_TRIVA Putative uncharacterized protein OS=Trich... 33 8.5
tr|A5C5B1|A5C5B1_VITVI Putative uncharacterized protein OS=Vitis... 33 8.6
tr|Q29M23|Q29M23_DROPS GA19631 OS=Drosophila pseudoobscura pseud... 33 8.6
tr|B4G6P5|B4G6P5_DROPE GL18564 OS=Drosophila persimilis GN=GL185... 33 8.6

>tr|Q8I2U1|Q8I2U1_PLAF7 Putative uncharacterized protein PFI1040c
OS=Plasmodium falciparum (isolate 3D7) GN=PFI1040c PE=4
SV=1
Length = 2290

Score = 35.0 bits (79), Expect = 2.2
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3

Query: 354 HSHKSEYFQNLKFEVDYSRC-L*RLLVSYCNEINFVSLHYVIKQGT*VWLHCQY 512
H + S Y+Q LKF+V YS C + Y N+ +F ++H +++ V+ + QY
Sbjct: 639 HKNHSLYYQKLKFKVAYSLCHFDDEVTIYSNKESFSNIHILVEYSRLVYKYLQY 692


>tr|Q97L30|Q97L30_CLOAB Possible glucanotransferase (Putative endo
alpha-1,4 polygalactosaminidase related protein)
OS=Clostridium acetobutylicum GN=CA_C0736 PE=4 SV=1
Length = 276

Score = 34.7 bits (78), Expect = 3.0
Identities = 20/54 (37%), Positives = 33/54 (61%)
Frame = -1

Query: 334 TLLSLIMETNAKIVST*HDDNPSQMVRSSQFEREKKTKLVEKLNAKSGLYLALE 173
+L SLI N + V T D N ++ +++S+ +R+KK K +EKL +K L +E
Sbjct: 192 SLKSLIHGINIESVYTTVDFNNNKFIKNSRDDRDKKVKYLEKLKSKDILIYIVE 245


>tr|A7Q5Y4|A7Q5Y4_VITVI Chromosome chr14 scaffold_54, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00031145001
PE=4 SV=1
Length = 614

Score = 33.9 bits (76), Expect = 5.1
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -2

Query: 450 LSHYNMKQEAFTSNVNNPPQISGFESTHFCASERKPSIPLC 328
+S Y K+++F ++ N P ISG E +++RK S P+C
Sbjct: 300 ISTYREKRQSFCNDRNLNPSISGAEQDFLSSAQRKHSTPVC 340


>tr|A2GY81|A2GY81_TRIVA Putative uncharacterized protein
OS=Trichomonas vaginalis G3 GN=TVAG_082860 PE=4 SV=1
Length = 425

Score = 33.1 bits (74), Expect = 8.5
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 7/42 (16%)
Frame = +3

Query: 381 NLKFEVDY-------SRCL*RLLVSYCNEINFVSLHYVIKQG 485
+LKFE DY ++CL RLL +Y +IN HY++K G
Sbjct: 95 SLKFEGDYITIKNVNAKCLFRLLETYFKQINENEYHYLVKFG 136


>tr|A5C5B1|A5C5B1_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_019534 PE=4 SV=1
Length = 595

Score = 33.1 bits (74), Expect = 8.6
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -2

Query: 450 LSHYNMKQEAFTSNVNNPPQISGFESTHFCASERKPSIPLC 328
+S Y K+++F ++ N P ISG E +++RK S P+C
Sbjct: 273 ISTYREKRQSFCNDRNLNPSISGAEQDFLSSAQRKNSNPVC 313


>tr|Q29M23|Q29M23_DROPS GA19631 OS=Drosophila pseudoobscura
pseudoobscura GN=GA19631 PE=4 SV=2
Length = 572

Score = 33.1 bits (74), Expect = 8.6
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Frame = -2

Query: 495 ILKCLA*SHSEVKQN-LSHYNMKQEAFTSNVNNPPQISGFESTHFCASERKPSIPLCSAL 319
+ +CL S V Q L+ Y +Q+AFT N ER+ + LCS L
Sbjct: 448 VTRCLQQSLQLVAQRVLAFYRQEQQAFTGN------------------ERENFVKLCSCL 489

Query: 318 SWKLMP-------KLFPHNTMTTHL 265
++ L+P +FP ++T HL
Sbjct: 490 AYDLVPYVQRCIHGIFPPQSLTVHL 514


>tr|B4G6P5|B4G6P5_DROPE GL18564 OS=Drosophila persimilis GN=GL18564
PE=4 SV=1
Length = 572

Score = 33.1 bits (74), Expect = 8.6
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Frame = -2

Query: 495 ILKCLA*SHSEVKQN-LSHYNMKQEAFTSNVNNPPQISGFESTHFCASERKPSIPLCSAL 319
+ +CL S V Q L+ Y +Q+AFT N ER+ + LCS L
Sbjct: 448 VTRCLQQSLQLVAQRVLAFYRQEQQAFTGN------------------ERENFVKLCSCL 489

Query: 318 SWKLMP-------KLFPHNTMTTHL 265
++ L+P +FP ++T HL
Sbjct: 490 AYDLVPYVQRCIHGIFPPQSLTVHL 514