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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914203
Clone id YMU001_000056_C03
Library
Length 323
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000056_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTTCTTCATGAACGGTGCTGTTGAGCCTTAAGGTCTCATTACAATCTACATTTTCCATTC
CTTTACCCACTTGTTGATTTGGGCTCTTCTCTAATTGCACCAAACCCTGCAAATCATGCT
CGTCCTCATTGTTTCCTTGATAATACTGATAACTAGCACCTGATGGTGCGAGCTCGGGCT
TGTCTTCAGTTTGACAGACTATTTCCACCTTGCTTTCAAGTAGCCCCTCCTTGTTATAAG
TCTCGCTATGGCCTTTCCACTCCAGCCTATTTGTGGCCATGGATGGATGATCTGCGACAT
AGAGACCATTGTTGCTTGTACTC
■■Homology search results ■■ -
sp_hit_id Q6UB99
Definition sp|Q6UB99|ANR11_HUMAN Ankyrin repeat domain-containing protein 11 OS=Homo sapiens
Align length 78
Score (bit) 32.3
E-value 0.74
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914203|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_C03.
         (323 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6UB99|ANR11_HUMAN Ankyrin repeat domain-containing protein 1...    32   0.74 
sp|A6UV17|TRUD_META3 Probable tRNA pseudouridine synthase D OS=M...    30   2.8  
sp|P36714|L100_ADE12 Late 100 kDa protein OS=Human adenovirus A ...    30   3.7  
sp|P97528|CNTN6_RAT Contactin-6 OS=Rattus norvegicus GN=Cntn6 PE...    30   3.7  
sp|Q9JMB8|CNTN6_MOUSE Contactin-6 OS=Mus musculus GN=Cntn6 PE=2 ...    30   3.7  
sp|Q9UQ52|CNTN6_HUMAN Contactin-6 OS=Homo sapiens GN=CNTN6 PE=2 ...    30   3.7  
sp|Q9SQI2|GIGAN_ARATH Protein GIGANTEA OS=Arabidopsis thaliana G...    29   8.2  
sp|Q74IV0|ENO3_LACJO Enolase 3 OS=Lactobacillus johnsonii GN=eno...    29   8.2  
sp|Q043Z5|ENO1_LACGA Enolase 1 OS=Lactobacillus gasseri (strain ...    29   8.2  
sp|Q8WWM7|ATX2L_HUMAN Ataxin-2-like protein OS=Homo sapiens GN=A...    29   8.2  

>sp|Q6UB99|ANR11_HUMAN Ankyrin repeat domain-containing protein 11
           OS=Homo sapiens GN=ANKRD11 PE=1 SV=2
          Length = 2663

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 29/78 (37%), Positives = 37/78 (47%)
 Frame = -2

Query: 304 LYVADHPSMATNRLEWKGHSETYNKEGLLESKVEIVCQTEDKPELAPSGASYQYYQGNNE 125
           L VA+ P+M  N L  KG + T ++E   ES  E     ED P  APS +      GNN 
Sbjct: 271 LKVANSPTMV-NLLLGKG-TYTSSEESSTESSEE-----EDAPSFAPSSS----VDGNNT 319

Query: 124 DEHDLQGLVQLEKSPNQQ 71
           D    +GL    K+P  Q
Sbjct: 320 DSEFEKGLKHKAKNPEPQ 337


>sp|A6UV17|TRUD_META3 Probable tRNA pseudouridine synthase D
           OS=Methanococcus aeolicus (strain Nankai-3 / ATCC
           BAA-1280) GN=truD PE=3 SV=1
          Length = 402

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 202 FPPCFQVAPPCYKSRYGLSTPAYLWPWMDDLRHRDH 309
           +  CF+V PP   S +  +  +YL+  M ++RHRD+
Sbjct: 262 YKECFKVLPPQLSSMFVNAYQSYLFNEMINIRHRDY 297


>sp|P36714|L100_ADE12 Late 100 kDa protein OS=Human adenovirus A
           serotype 12 PE=3 SV=1
          Length = 782

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -2

Query: 187 EDKPELAPSGASYQYYQGNNEDEHDLQGLVQLEKSPNQQVGKGMENVD 44
           +DK  L P  A  +   G      + +G +Q++K PN+Q   G+E+ D
Sbjct: 26  KDKSLLIPQDAPVEQNLGYETPPEEFEGFLQIQKQPNEQ-NAGLEDHD 72


>sp|P97528|CNTN6_RAT Contactin-6 OS=Rattus norvegicus GN=Cntn6 PE=1
           SV=1
          Length = 1028

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -2

Query: 238 YNKEGLLE-SKVEIVCQTEDKPELAPSGASYQYYQGNN 128
           YN EG    S V IV   ED+P LAP G S Q +  ++
Sbjct: 781 YNNEGEGSLSTVSIVYSGEDEPRLAPRGTSVQSFSASD 818


>sp|Q9JMB8|CNTN6_MOUSE Contactin-6 OS=Mus musculus GN=Cntn6 PE=2
           SV=2
          Length = 1028

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 238 YNKEGLLE-SKVEIVCQTEDKPELAPSGASYQYYQGN 131
           YN EG    S V IV   ED+P+LAP G S Q +  +
Sbjct: 781 YNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSAS 817


>sp|Q9UQ52|CNTN6_HUMAN Contactin-6 OS=Homo sapiens GN=CNTN6 PE=2
           SV=1
          Length = 1028

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 238 YNKEGLLE-SKVEIVCQTEDKPELAPSGASYQYYQGN 131
           YN EG    S V IV   ED+P+LAP G S Q +  +
Sbjct: 781 YNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSAS 817


>sp|Q9SQI2|GIGAN_ARATH Protein GIGANTEA OS=Arabidopsis thaliana GN=GI
            PE=1 SV=2
          Length = 1173

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = -3

Query: 276  PQIGWSGKAIARLITRRGYLKARWK*SVKLKTSPSSHHQVLVISIIKETMRTSMI 112
            P + W    +A +      LK R   +++  + PS+H + L  S++++ M  S I
Sbjct: 1048 PVLAWGPSGLAVVDGLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDIMNQSSI 1102


>sp|Q74IV0|ENO3_LACJO Enolase 3 OS=Lactobacillus johnsonii GN=eno3
           PE=3 SV=1
          Length = 428

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = -2

Query: 124 DEHDLQGLVQLEKSPNQQVGKGMENVDCNETLRLNSTVHE 5
           DE+D++G+V+  +S   ++   +++  C     LN  +HE
Sbjct: 290 DENDVEGMVKFTQSHKDRIQIVLDDFICTNPKLLNKAIHE 329


>sp|Q043Z5|ENO1_LACGA Enolase 1 OS=Lactobacillus gasseri (strain
           ATCC 33323 / DSM 20243) GN=eno1 PE=3 SV=1
          Length = 428

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = -2

Query: 124 DEHDLQGLVQLEKSPNQQVGKGMENVDCNETLRLNSTVHE 5
           DE+D++G+V+  +S   ++   +++  C     LN  +HE
Sbjct: 290 DENDVEGMVKFTESHKDRIQIVLDDFICTNPKLLNKAIHE 329


>sp|Q8WWM7|ATX2L_HUMAN Ataxin-2-like protein OS=Homo sapiens
           GN=ATXN2L PE=1 SV=2
          Length = 1075

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -2

Query: 220 LESKVEIVCQTEDKPELAPSGAS 152
           + SK E V   EDKP LAPSG +
Sbjct: 596 VSSKTESVSDKEDKPPLAPSGGT 618
tr_hit_id Q466E2
Definition tr|Q466E2|Q466E2_METBF Putative uncharacterized protein OS=Methanosarcina barkeri (strain Fusaro / DSM 804)
Align length 74
Score (bit) 33.9
E-value 4.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914203|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_C03.
         (323 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q466E2|Q466E2_METBF Putative uncharacterized protein OS=Metha...    34   4.1  
tr|B4DBW8|B4DBW8_9BACT YD repeat protein OS=Chthoniobacter flavu...    33   5.4  
tr|B8LMF2|B8LMF2_PICSI Putative uncharacterized protein OS=Picea...    33   5.4  
tr|A4FGM6|A4FGM6_SACEN Transcriptional regulator, LuxR family OS...    33   7.0  
tr|A2EH37|A2EH37_TRIVA Putative uncharacterized protein OS=Trich...    33   9.2  

>tr|Q466E2|Q466E2_METBF Putative uncharacterized protein
           OS=Methanosarcina barkeri (strain Fusaro / DSM 804)
           GN=Mbar_A3377 PE=4 SV=1
          Length = 254

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
 Frame = -2

Query: 247 SETYNKEGLLESKVE---IVCQTEDKPELAPSGASYQYYQGNNE-DEHDLQGLVQLEKSP 80
           SE   K GL   KV     +   ++K E+   G   +Y++ N+  DE +++ +  L+   
Sbjct: 127 SEIVEKTGLGRGKVRHHITILAVQNKIEVHKDGGKIRYFENNSTYDEEEIKIISALQNIT 186

Query: 79  NQQVGKGMENVDCN 38
           NQ++   ++N  CN
Sbjct: 187 NQRIVSEIQNGKCN 200


>tr|B4DBW8|B4DBW8_9BACT YD repeat protein OS=Chthoniobacter flavus
           Ellin428 GN=CfE428DRAFT_6409 PE=3 SV=1
          Length = 2159

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 10/56 (17%)
 Frame = -2

Query: 274 TNRLEWKGHSETYNKEGLLESKVEIVCQTEDKPELA------PSGA----SYQYYQ 137
           T R EW+   +TYN +G+LES+   V QTE   E+       P+GA    +Y YY+
Sbjct: 581 TQRTEWR---QTYNADGVLESESANVFQTEPWGEVQVASIADPNGAALTTTYSYYE 633


>tr|B8LMF2|B8LMF2_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 754

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 23/104 (22%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
 Frame = -2

Query: 319 TSNNGLYVADHPSMATNRLEWKGHSETYNKEGLLESKVEIVCQTEDKPELAPSGASYQYY 140
           T ++G+ +A   ++ ++  +W  HSE Y        K+E++C+   K        ++   
Sbjct: 468 TLSSGVEIAVTSTIISSAKDWSEHSELY-----FRKKIEVLCRINHK--------NFLNL 514

Query: 139 QGNNEDEHDLQGLVQLEKSPNQQV-----GKGMENVDCNETLRL 23
            G  E+E   + ++  E +PN  +      KG E++D    +R+
Sbjct: 515 LGFCEEEEPFRRMMVFEYAPNGTLFEHLHNKGAEHLDWTTRMRI 558


>tr|A4FGM6|A4FGM6_SACEN Transcriptional regulator, LuxR family
           OS=Saccharopolyspora erythraea (strain NRRL 23338)
           GN=SACE_3930 PE=4 SV=1
          Length = 767

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +1

Query: 196 RLFPPCFQVAPPCYKSRYGLSTPAYLWPWMDDLRHRDHCCL 318
           RLFP C       +++  GLS  A +  W+DD  H DH  L
Sbjct: 87  RLFPACEAGPDRAHRALVGLSGEAPVLCWVDDAHHLDHTSL 127


>tr|A2EH37|A2EH37_TRIVA Putative uncharacterized protein
           OS=Trichomonas vaginalis G3 GN=TVAG_115640 PE=4 SV=1
          Length = 960

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = -2

Query: 220 LESKVEIVCQTEDK---PELAPSGASYQYYQGNNEDEHDLQGLVQLEKSPNQQV 68
           LE KVE V + ED+   PE      ++Q    N+ED+ D + L   ++  NQ+V
Sbjct: 695 LEKKVEEVIEEEDEENPPENENENNNFQENDENDEDDEDFKNLKDDDQEKNQEV 748