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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914205
Clone id YMU001_000056_C05
Library
Length 593
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000056_C05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCTCAATCTAGCTGCACATAACATAGATACTCACGACACCCTGTGTACTTTCACAAGGAG
AGCAAAGAGCATACAAGCTCTGACTTTTTTGACACAGAGAAAAATAAGCCTCCTACTTTA
TCTGGGGTGATACACGCTCAAGAAAGGCTCGCAGTTAGGGTTGCTATGGAAGCCCTTCCA
TGCAAAGATTGTGAAAGTTTAGATCCAGATACGGCATTGCCCCTGAACGATACTTGTGAT
AGGGCGGTAGGAAGCAGTGGAGATGGTCGTTTGTGCACTGTGAGAACACCTATCATTGAT
ATGGCGGATGTGGGTCCCACGGCTGTTGTTGAGGATGAAGAGACTATAAACAGCAATATT
CAGATGTCGTGTAAACTCGCTACTCGAAGGCAGCAAGATTGTGATAAAGGCCACTGTGAA
GTGCTCAAAGAATGCAATACTAATGACAGTATTGTTCCTAATGGGGTCGATAAGCATGAG
GGGCAAGCTCAACAATTTTGTGATGATCCAGAGCCCAAAAGAAAGCTTTTCGATGTGAAC
ATGATTGATTGTGTGGTGCCGAGTATTCTGGCATTCCCTCAGCTATCTGAAAG
■■Homology search results ■■ -
sp_hit_id P12012
Definition sp|P12012|GNTP_BACSU Gluconate permease OS=Bacillus subtilis
Align length 83
Score (bit) 33.5
E-value 0.82
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914205|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_C05.
         (593 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12012|GNTP_BACSU Gluconate permease OS=Bacillus subtilis GN=...    33   0.82 
sp|O42926|VP13B_SCHPO Vacuolar protein sorting-associated protei...    32   2.4  
sp|Q9Y6X8|ZHX2_HUMAN Zinc fingers and homeoboxes protein 2 OS=Ho...    32   3.1  
sp|P25391|LAMA1_HUMAN Laminin subunit alpha-1 OS=Homo sapiens GN...    32   3.1  
sp|Q9WU81|SPX2_MOUSE Sugar phosphate exchanger 2 OS=Mus musculus...    31   4.1  
sp|Q9UT46|MOC3_SCHPO Transcriptional regulatory protein moc3 OS=...    31   4.1  
sp|Q5R7F2|ZHX2_PONAB Zinc fingers and homeoboxes protein 2 OS=Po...    31   5.3  
sp|P35953|VLDLR_RABIT Very low-density lipoprotein receptor OS=O...    30   9.1  
sp|Q8R4Y4|STAB1_MOUSE Stabilin-1 OS=Mus musculus GN=Stab1 PE=2 SV=1    30   9.1  
sp|Q7YU81|CHN_DROME Protein charlatan OS=Drosophila melanogaster...    30   9.1  

>sp|P12012|GNTP_BACSU Gluconate permease OS=Bacillus subtilis
           GN=gntP PE=3 SV=1
          Length = 448

 Score = 33.5 bits (75), Expect = 0.82
 Identities = 22/83 (26%), Positives = 43/83 (51%)
 Frame = -3

Query: 531 EKLSFGLWIITKLLSLPLMLIDPIRNNTVISIAFFEHFTVAFITILLPSSSEFTRHLNIA 352
           E   FG+ + T +L + +M +  I +    +I F ++  +AFI ++  +S+     L +A
Sbjct: 224 ETPGFGISVFTAMLPIIIMSVATIIDLLQETIGFADNGVLAFIRLIGNASTAMIISLLVA 283

Query: 351 VYSLFILNNSRGTHIRHINDRCS 283
           VY++ I    R   ++ + D CS
Sbjct: 284 VYTMGI---KRNIPVKTVMDSCS 303


>sp|O42926|VP13B_SCHPO Vacuolar protein sorting-associated protein
           13b OS=Schizosaccharomyces pombe GN=vps13b PE=2 SV=1
          Length = 3131

 Score = 32.0 bits (71), Expect = 2.4
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -1

Query: 284 LTVHKRPSPLLPTALSQVSFRGNAVS 207
           +T++K P+P +P  LSQ+SFRG  VS
Sbjct: 259 VTINKLPTPEIPRFLSQISFRGFDVS 284


>sp|Q9Y6X8|ZHX2_HUMAN Zinc fingers and homeoboxes protein 2 OS=Homo
           sapiens GN=ZHX2 PE=1 SV=1
          Length = 837

 Score = 31.6 bits (70), Expect = 3.1
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = +1

Query: 142 ERLAVRVAMEALPCKDCESLDPDTALPLNDTCDRAVGSSGDGR 270
           E+L  RV + + P KDC    P  A     T DR+ GSS DG+
Sbjct: 743 EKLVTRVKVGSEPAKDCLPAKPSEA-----TSDRSEGSSRDGQ 780


>sp|P25391|LAMA1_HUMAN Laminin subunit alpha-1 OS=Homo sapiens
            GN=LAMA1 PE=1 SV=1
          Length = 3075

 Score = 31.6 bits (70), Expect = 3.1
 Identities = 38/162 (23%), Positives = 58/162 (35%), Gaps = 37/162 (22%)
 Frame = +1

Query: 178  PCKDC------ESLDPDTALPLN-------DTCD--------RAVGSSGDGRLCTVRTPI 294
            PC  C      ++ DP+T   LN       D CD        +  GS+ D  LC    P 
Sbjct: 1399 PCVPCSCNNHSDTCDPNTGKCLNCGDNTAGDHCDVCTSGYYGKVTGSASDCALCAC--PH 1456

Query: 295  IDMADVGPTAVVEDEETINSNIQM---------SCKLATRRQQDCDKGHCEVLKECNTND 447
               A   PT V+E +     +  +          C  +         G C+   +CN + 
Sbjct: 1457 SPPASFSPTCVLEGDHDFRCDACLLGYEGKHCERCSSSYYGNPQTPGGSCQKC-DCNRHG 1515

Query: 448  SIVPNGVDKHEGQ-------AQQFCDDPEPKRKLFDVNMIDC 552
            S V    D+  GQ       +   CD+ EP+  L + + + C
Sbjct: 1516 S-VHGDCDRTSGQCVCRLGASGLRCDECEPRHILMETDCVSC 1556


>sp|Q9WU81|SPX2_MOUSE Sugar phosphate exchanger 2 OS=Mus musculus
           GN=Slc37a2 PE=2 SV=1
          Length = 501

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
 Frame = -1

Query: 317 GPTSAISMI---GVLTVHKRPSPLLPTALS-----QVSFRGNAVSGSKLSQSLHGRASIA 162
           G TS+I M+   GVL     P  L+ TA+S       S +GNA + S ++  + G  SI 
Sbjct: 386 GITSSIVMLIICGVLV--NGPYALITTAVSADLGTHESLKGNAKALSTVTAIIDGTGSIG 443

Query: 161 TLTASLS*ACITPDKVGGLFFSVSKKSELVCSLL 60
                L    I+P     +F+ +     L C LL
Sbjct: 444 AALGPLLAGLISPTGWNNVFYMLISADVLACLLL 477


>sp|Q9UT46|MOC3_SCHPO Transcriptional regulatory protein moc3
           OS=Schizosaccharomyces pombe GN=moc3 PE=1 SV=3
          Length = 497

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = -1

Query: 284 LTVHKRPSPLLPTALSQVSFR-GNAVSGSKLSQSLHGRASIATLTASLS*ACITPDK 117
           L+VH    PL+PT+++  S + G+  SGS  SQS      +  +T+S + + +TP K
Sbjct: 84  LSVHSAQQPLIPTSIASSSAQTGDTFSGS--SQSNFNTNDLNQMTSSSNLSTVTPIK 138


>sp|Q5R7F2|ZHX2_PONAB Zinc fingers and homeoboxes protein 2 OS=Pongo
           abelii GN=ZHX2 PE=2 SV=1
          Length = 837

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = +1

Query: 142 ERLAVRVAMEALPCKDCESLDPDTALPLNDTCDRAVGSSGDGR 270
           E+L  RV + + P KDC    P  A     T DR+ GSS DG+
Sbjct: 743 EKLVPRVKVGSEPAKDCLPAKPSEA-----TSDRSEGSSRDGQ 780


>sp|P35953|VLDLR_RABIT Very low-density lipoprotein receptor
           OS=Oryctolagus cuniculus GN=VLDLR PE=2 SV=1
          Length = 873

 Score = 30.0 bits (66), Expect = 9.1
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 388 RQQDCDKGHCEVLKECNTNDSIVPNGVDKH 477
           ++QDC     E LKEC+ N+ +V NG   H
Sbjct: 340 QEQDCRDWSDEPLKECHVNECLVNNGGCSH 369


>sp|Q8R4Y4|STAB1_MOUSE Stabilin-1 OS=Mus musculus GN=Stab1 PE=2 SV=1
          Length = 2571

 Score = 30.0 bits (66), Expect = 9.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 205  PDTALPLNDTCDRAVGSSGDGRLCTV 282
            P     L ++C+ ++G  GDGR+CTV
Sbjct: 2066 PQAVCRLGNSCECSLGYEGDGRVCTV 2091


>sp|Q7YU81|CHN_DROME Protein charlatan OS=Drosophila melanogaster
           GN=chn PE=1 SV=3
          Length = 1214

 Score = 30.0 bits (66), Expect = 9.1
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +1

Query: 256 SGDGRLCTVRTPIIDMADVGPTAVVEDEETINSNIQ 363
           +G+G L T+ TP+  +A  GPTAV E E+   +N+Q
Sbjct: 41  TGNG-LHTLGTPVAQVATSGPTAVPEGEQRSFTNLQ 75
tr_hit_id B6KCM0
Definition tr|B6KCM0|B6KCM0_TOXGO ABC transporter, putative OS=Toxoplasma gondii ME49
Align length 133
Score (bit) 36.6
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914205|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_C05.
         (593 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6KCM0|B6KCM0_TOXGO ABC transporter, putative OS=Toxoplasma g...    37   1.1  
tr|A6RQV3|A6RQV3_BOTFB Predicted protein OS=Botryotinia fuckelia...    36   1.4  
tr|A7I0C9|A7I0C9_CAMHC Putative uncharacterized protein OS=Campy...    35   2.5  
tr|B0W7P6|B0W7P6_CULQU E3 ubiquitin-protein ligase highwire OS=C...    35   3.2  
tr|Q8JHU3|Q8JHU3_DANRE Protein kinase PKK OS=Danio rerio GN=ripk...    34   5.5  
tr|Q22BL5|Q22BL5_TETTH Insect antifreeze protein OS=Tetrahymena ...    34   5.5  
tr|B7T1N9|B7T1N9_LEIAM Leucine-rich protein OS=Leishmania amazon...    34   5.5  
tr|A7RGE4|A7RGE4_NEMVE Predicted protein (Fragment) OS=Nematoste...    34   5.5  
tr|A4HXG8|A4HXG8_LEIIN Putative uncharacterized protein OS=Leish...    34   5.5  
tr|Q0S432|Q0S432_RHOSR Putative uncharacterized protein OS=Rhodo...    34   7.2  
tr|Q4QCW9|Q4QCW9_LEIMA Protein kinase, putative OS=Leishmania ma...    33   9.4  
tr|B6NRT9|B6NRT9_BRAFL Putative uncharacterized protein (Fragmen...    33   9.4  
tr|B6L9B8|B6L9B8_BRAFL Putative uncharacterized protein OS=Branc...    33   9.4  

>tr|B6KCM0|B6KCM0_TOXGO ABC transporter, putative OS=Toxoplasma
           gondii ME49 GN=TGME49_069000 PE=4 SV=1
          Length = 1056

 Score = 36.6 bits (83), Expect = 1.1
 Identities = 40/133 (30%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
 Frame = -1

Query: 557 TTQSIMFTSKSFLLGSGSSQNC*ACPSCLSTPLGTILSLVLHSLSTSQWPLSQSCCLRVA 378
           +T S   TS  FLL    S +C ACP   + P  T L L L SL    WP +    LRV 
Sbjct: 301 STSSTSSTSSPFLLSRSHSVDCRACPVSRAPPNPTSLQL-LFSLFPFLWPTALKDRLRVL 359

Query: 377 SLHDI*ILLFIVXXXXXTAVGPTSAISMIGVLTVHKRPSPLLPTALSQVSFRGNAVSGS- 201
                  +  +V     T   P    +++    V    SPL P+  S  S   + ++ S 
Sbjct: 360 G-----SVACLVTAKVLTIQAPLLLANLVDAFQVLPHNSPLSPSGASPSSGDTSLLASSG 414

Query: 200 KLSQSLHGRASIA 162
           + S SL   A+ A
Sbjct: 415 ETSSSLSPSAAPA 427


>tr|A6RQV3|A6RQV3_BOTFB Predicted protein OS=Botryotinia fuckeliana
           (strain B05.10) GN=BC1G_02826 PE=4 SV=1
          Length = 245

 Score = 36.2 bits (82), Expect = 1.4
 Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
 Frame = -3

Query: 543 HVHIEKLSFGLWIITKLLSLPLMLIDPIRNNTVISIAF-FEHF--TVAFITILLPSSSEF 373
           H   EKL+    I +  L++P++ IDP+  ++V  +++   H    +    ++LP SS  
Sbjct: 101 HYDEEKLAGTAMIFSYHLAMPVISIDPLNISSVALLSYQGSHLEEEICCSILVLPLSSLE 160

Query: 372 TRHLNI-AVYSLFILNNSRGTHIRHINDRCSHSAQTTI 262
           TRH  + +++ LF+    R    ++  + CS   +T +
Sbjct: 161 TRHYFVPSLHCLFLTEEGRRMRFQNAEETCSRFKETML 198


>tr|A7I0C9|A7I0C9_CAMHC Putative uncharacterized protein
           OS=Campylobacter hominis (strain ATCC BAA-381 / LMG
           19568 / NCTC 13146 / CH001A) GN=CHAB381_0369 PE=4 SV=1
          Length = 178

 Score = 35.4 bits (80), Expect = 2.5
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = +1

Query: 316 PTAVVEDEETINSNIQMSCKLATRRQQDCDKGHCEVLKECNTNDSIV 456
           P  V++DE   N  I  +CK + + +Q C+ G+CE + + +  D I+
Sbjct: 113 PNKVIQDENGANRYIWKNCKESGKYEQKCEDGNCESVPKLDCCDRIL 159


>tr|B0W7P6|B0W7P6_CULQU E3 ubiquitin-protein ligase highwire OS=Culex
            quinquefasciatus GN=CpipJ_CPIJ003142 PE=4 SV=1
          Length = 2476

 Score = 35.0 bits (79), Expect = 3.2
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
 Frame = +1

Query: 247  VGSSGDGRLCTVRTPIIDMADVGPTAVVEDEETI----NSNIQMSCKLATRRQQDCDKGH 414
            +G+SGD     V   +++ + +   +VV D+ TI    NSN Q++C    RR  +C K H
Sbjct: 1013 IGASGDQTFVKVDESLVNASMLSKFSVVADKNTILLIPNSNYQLNCIAINRRNGNC-KAH 1071

Query: 415  CE 420
             E
Sbjct: 1072 NE 1073


>tr|Q8JHU3|Q8JHU3_DANRE Protein kinase PKK OS=Danio rerio GN=ripk4
           PE=2 SV=1
          Length = 820

 Score = 34.3 bits (77), Expect = 5.5
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +1

Query: 334 DEETINSNIQMSCKLATRRQQDCDKGHCEVLKECNTNDSIVPNGVDKH 477
           D E++N +++  C LA +       GHCEVLKE   + S V N  D++
Sbjct: 692 DPESVNHDLRTPCHLAAQN------GHCEVLKELLRSCSDVANAQDRN 733


>tr|Q22BL5|Q22BL5_TETTH Insect antifreeze protein OS=Tetrahymena
            thermophila SB210 GN=TTHERM_01098980 PE=4 SV=1
          Length = 3751

 Score = 34.3 bits (77), Expect = 5.5
 Identities = 21/79 (26%), Positives = 33/79 (41%)
 Frame = +1

Query: 202  DPDTALPLNDTCDRAVGSSGDGRLCTVRTPIIDMADVGPTAVVEDEETINSNIQMSCKLA 381
            D  + LP   +C      + +G L  V         V  + +  D  T+N N Q SC L 
Sbjct: 1031 DDSSCLPCYPSCATCQDGTSNGCLSCVSD---SFTLVNNSCLCNDGTTLNCN-QKSCSLC 1086

Query: 382  TRRQQDCDKGHCEVLKECN 438
            +   + C +GH ++   CN
Sbjct: 1087 SPNCKTCAQGHAQICTSCN 1105


>tr|B7T1N9|B7T1N9_LEIAM Leucine-rich protein OS=Leishmania
           amazonensis PE=4 SV=1
          Length = 671

 Score = 34.3 bits (77), Expect = 5.5
 Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 17/103 (16%)
 Frame = +1

Query: 37  HPVYFHKESKEHTSSDFFDTEKNKPPTLSGVIHAQERLAVRVAMEALPCKDCESL----- 201
           H +   ++ + H   DF  TE+   P+   V   QE  A R+A     C + ++L     
Sbjct: 26  HQMRMQEQLRNHAIKDFDATEQQVSPSYF-VASLQELCAQRLADSFAECAEVDALREEQP 84

Query: 202 ------------DPDTALPLNDTCDRAVGSSGDGRLCTVRTPI 294
                        PDT LPL  T  R +      R C  R P+
Sbjct: 85  DLYAMVLERLPTQPDTMLPLRITVPRIIDEKYWQRCCKARWPL 127


>tr|A7RGE4|A7RGE4_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g80370 PE=4 SV=1
          Length = 662

 Score = 34.3 bits (77), Expect = 5.5
 Identities = 27/109 (24%), Positives = 42/109 (38%)
 Frame = +1

Query: 187 DCESLDPDTALPLNDTCDRAVGSSGDGRLCTVRTPIIDMADVGPTAVVEDEETINSNIQM 366
           DC      T  P +  C    G +GDG++C      +D    G     E+E   NS    
Sbjct: 343 DCSPDAVCTNTPGSFVCRCNKGFTGDGKICI----DVDECKTGQVKCGENEVCANSLGSF 398

Query: 367 SCKLATRRQQDCDKGHCEVLKECNTNDSIVPNGVDKHEGQAQQFCDDPE 513
           +C+ A   ++D  +G C  + EC T          KH+      C + +
Sbjct: 399 TCQCAEGYERD-SQGKCADVNECKTG---------KHDCSVNALCTNTD 437


>tr|A4HXG8|A4HXG8_LEIIN Putative uncharacterized protein
           OS=Leishmania infantum GN=LinJ17.1030 PE=4 SV=1
          Length = 674

 Score = 34.3 bits (77), Expect = 5.5
 Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 17/103 (16%)
 Frame = +1

Query: 37  HPVYFHKESKEHTSSDFFDTEKNKPPTLSGVIHAQERLAVRVAMEALPCKDCESL----- 201
           H +   ++ + H   DF  TE+   P+   V   QE  A R+A     C + ++L     
Sbjct: 26  HQMRMQEQLRNHAIKDFDATEQQVSPSYF-VASLQELCAQRLADSFAECAEVDALREEQP 84

Query: 202 ------------DPDTALPLNDTCDRAVGSSGDGRLCTVRTPI 294
                        PDT LPL  T  R +      R C  R P+
Sbjct: 85  DLYAMVLERLPTQPDTMLPLRITVPRIIDEKYWQRCCKARWPL 127


>tr|Q0S432|Q0S432_RHOSR Putative uncharacterized protein
           OS=Rhodococcus sp. (strain RHA1) GN=RHA1_ro05927 PE=4
           SV=1
          Length = 116

 Score = 33.9 bits (76), Expect = 7.2
 Identities = 17/49 (34%), Positives = 29/49 (59%)
 Frame = -3

Query: 279 SAQTTISTASYRPITSIVQGQCRIWI*TFTIFAWKGFHSNPNCEPFLSV 133
           SA + +STAS+  + S + G  R     +++ +WKG+H +P   P L+V
Sbjct: 56  SAGSALSTASFASLGSALSGLSR-----WSLMSWKGWHDSPPEHPHLTV 99