| BP914213 |
| Clone id |
YMU001_000056_D03 |
| Library |
YMU01 |
| Length |
568 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000056_D03. |
| Accession |
BP914213 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
AAAAGTTCCAAGGCTTCCATAATCACTTTGACAACCGCCTGCTAATTACGGGGCATAAAC
AATGAATCATCAGCGTAAGCCTGGCCAACGAATGTATGGCCCGAAGGTAACCGCAGACCA
TGAAGACGCTCAGTAGAGGTCAAGTGATCAAGATAAGTCAACAGCGGGTGAGTAGCAATA
GCATACAATAGAGCACTAAGGGGGCATCCTTGCCTAACTAAACAACCAAGAGGCCAAGAT
TCAGTTAATTCACCTTCCAAGATCCCTGAAGACGTGTTACATGCATACAAAAAATAAACC
ACATTGGCGAATTTAGGACCAAACCCTAGGCATCTCATCGTGGCAGCAATGAAATCCCAC
TGCACAGTGTCAAATGCCTTTTCAATGTCAACAACTAACACATCCTGTTGAGTGTACTTA
GCATACTCCATGCCAATCATAACATTAGCCACATTATCCATAATTTGGCGACGTGGAATG
AAATCATATTGAGCCTGACGGAGTCCTGCAAAAAGATGGTCCTTAATGCGGTGCACCAGC
ATCTTAGCCAGGAGTACCTGCAGGTAAT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P14381 |
| Definition |
sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis |
| Align length |
173 |
| Score (bit) |
76.3 |
| E-value |
1.0e-13 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914213|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_D03.
(568 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa prot... 76 1e-13
sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog OS=Nyc... 75 3e-13
sp|P11369|POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1 O... 65 3e-10
sp|Q05118|PO23_POPJA Retrovirus-related Pol polyprotein from typ... 43 0.001
sp|P16423|POLR_DROME Retrovirus-related Pol polyprotein from typ... 37 0.052
sp|Q03274|PO22_POPJA Retrovirus-related Pol polyprotein from typ... 37 0.068
sp|Q03278|PO21_NASVI Retrovirus-related Pol polyprotein from typ... 35 0.34
sp|Q9W497|GR05A_DROME Gustatory receptor for trehalose OS=Drosop... 31 3.7
sp|Q2A865|S6A19_RAT Sodium-dependent neutral amino acid transpor... 31 4.9
sp|P16425|Y2R2_DROME Putative 115 kDa protein in type-1 retrotra... 30 6.4
sp|Q9D687|S6A19_MOUSE Sodium-dependent neutral amino acid transp... 30 6.4
sp|Q9SV82|FB228_ARATH F-box protein At4g10400 OS=Arabidopsis tha... 30 8.4
>sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein
OS=Xenopus laevis PE=4 SV=1
Length = 1308
Score = 76.3 bits (186), Expect = 1e-13
Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 3/173 (1%)
Frame = -3
Query: 554 LLAKMLVHRIKDHLFAGLRQAQYDFIPRRQIMDNVANVMIGMEYAKYTQQDV--LVVDIE 381
++AK + R+K L + Q +P R I DNV + + +A+ T + L +D E
Sbjct: 537 IVAKAISLRLKSVLAEVIHPDQSYTVPGRTIFDNVFLIRDLLHFARRTGLSLAFLSLDQE 596
Query: 380 KAFDTVQWDFIAATMRCLGFGPKFANVVYFLYACNTSSGILEGELTESWPLGCLVRQGCP 201
KAFD V ++ T++ FGP+F + +YA + LT G VRQGCP
Sbjct: 597 KAFDRVDHQYLIGTLQAYSFGPQFVGYLKTMYASAECLVKINWSLTAPLAFGRGVRQGCP 656
Query: 200 LSALLYAIATHPLLTYLDHLTSTERLHGLRLPS-GHTFVGQAYADDSLFMPRN 45
LS LY++A P L L +RL GL L V AYADD + + ++
Sbjct: 657 LSGQLYSLAIEPFLCLL-----RKRLTGLVLKEPDMRVVLSAYADDVILVAQD 704
>sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog
OS=Nycticebus coucang PE=1 SV=1
Length = 1260
Score = 74.7 bits (182), Expect = 3e-13
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Frame = -3
Query: 554 LLAKMLVHRIKDHLFAGLRQAQYDFIPRRQIMDNVA---NVMIGMEYAKYTQQDVLVVDI 384
+L K+L +RI+ H+ + Q FIP Q N+ NV+ + K +L +D
Sbjct: 541 ILNKILTNRIQQHIKKIIHHDQVGFIPGSQGWFNIRKSINVIQHINKLKNKDHMILSIDA 600
Query: 383 EKAFDTVQWDFIAATMRCLGFGPKFANVVYFLYACNTSSGILEGELTESWPLGCLVRQGC 204
EKAFD +Q F+ T++ +G F ++ +Y+ T++ IL G +S+PL RQGC
Sbjct: 601 EKAFDNIQHPFMIRTLKKIGIEGTFLKLIEAIYSKPTANIILNGVKLKSFPLRSGTRQGC 660
Query: 203 PLSALLYAIATHPLLTYLDHLTSTERLH 120
PLS LL+ I L + + + +H
Sbjct: 661 PLSPLLFNIVMEVLAIAIREEKAIKGIH 688
>sp|P11369|POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1
OS=Mus musculus GN=Pol PE=2 SV=2
Length = 1281
Score = 64.7 bits (156), Expect = 3e-10
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Frame = -3
Query: 554 LLAKMLVHRIKDHLFAGLRQAQYDFIPRRQIMDNVA---NVMIGMEYAKYTQQDVLVVDI 384
+L K+L +RI++H+ A + Q FIP Q N+ NV+ + K ++ +D
Sbjct: 549 ILNKILANRIQEHIKAIIHPDQVGFIPGMQGWFNIRKSINVIHYINKLKDKNHMIISLDA 608
Query: 383 EKAFDTVQWDFIAATMRCLGFGPKFANVVYFLYACNTSSGILEGELTESWPLGCLVRQGC 204
EKAFD +Q F+ + G + N++ +Y+ ++ + GE E+ PL RQGC
Sbjct: 609 EKAFDKIQHPFMIKVLERSGIQGPYLNMIKAIYSKPVANIKVNGEKLEAIPLKSGTRQGC 668
Query: 203 PLSALLYAIATHPL 162
PLS L+ I L
Sbjct: 669 PLSPYLFNIVLEVL 682
>sp|Q05118|PO23_POPJA Retrovirus-related Pol polyprotein from type-1
retrotransposable element R2 (Fragment) OS=Popillia
japonica PE=4 SV=1
Length = 606
Score = 42.7 bits (99), Expect = 0.001
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 5/138 (3%)
Frame = -3
Query: 452 VANVMIGMEYAKYTQ-----QDVLVVDIEKAFDTVQWDFIAATMRCLGFGPKFANVVYFL 288
+AN+++ Y K + +V+ +DI KAFDTV I MR G + +
Sbjct: 3 LANIIMLEHYIKLRRLKGKTYNVVSLDIRKAFDTVSHPAILRAMRAFGIDDGMQDFIMST 62
Query: 287 YACNTSSGILEGELTESWPLGCLVRQGCPLSALLYAIATHPLLTYLDHLTSTERLHGLRL 108
++ ++ G T + V+QG PLS +L+ I L+T L+ + G +
Sbjct: 63 ITDAYTNIVVGGRTTNKIYIRNGVKQGDPLSPVLFNIVLDELVTRLN-----DEQPGASM 117
Query: 107 PSGHTFVGQAYADDSLFM 54
A+ADD L +
Sbjct: 118 TPACKIASLAFADDLLLL 135
>sp|P16423|POLR_DROME Retrovirus-related Pol polyprotein from type-2
retrotransposable element R2DM OS=Drosophila
melanogaster GN=pol PE=4 SV=1
Length = 1057
Score = 37.4 bits (85), Expect = 0.052
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Frame = -3
Query: 491 QYDFIPRRQIMDN--VANVMIGMEYAKYTQQDVLVVDIEKAFDTVQWDFIAATMRCLGFG 318
Q F+P DN + ++++ + + + +D+ KAFD++ I T+R G
Sbjct: 446 QRGFLPTDGCADNATIVDLVLRHSHKHFRSCYIANLDVSKAFDSLSHASIYDTLRAYGAP 505
Query: 317 PKFANVVYFLYACNTSSGILEGELTESWPLGCLVRQGCPLSALLYAIATHPLLTYL 150
F + V Y +S +G +E + V+QG PLS +L+ + LL L
Sbjct: 506 KGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQGDPLSPILFNLVMDRLLRTL 561
>sp|Q03274|PO22_POPJA Retrovirus-related Pol polyprotein from type-1
retrotransposable element R2 (Fragment) OS=Popillia
japonica PE=4 SV=1
Length = 711
Score = 37.0 bits (84), Expect = 0.068
Identities = 46/178 (25%), Positives = 73/178 (41%), Gaps = 5/178 (2%)
Frame = -3
Query: 563 LQVLLAKMLVHRIKDHLFAGLRQAQYDFIPRRQIMDNVANVMIGMEYAKYTQQDVLVVDI 384
LQ LL ++L R++ + Q Y I + + + I + +V+ +D+
Sbjct: 85 LQRLLHRILAKRLEAAVELHPAQKGYARIDGTLVNSLLLDTYISSRREQRKTYNVVSLDV 144
Query: 383 EKAFDTVQWDFIAATMRCLGFGPKFAN-VVYFLYACNTSSGILEGELTESWPLGCLVRQG 207
KAFDTV I ++ LG +N + L T+ + G T + V+QG
Sbjct: 145 RKAFDTVSHSSICRALQRLGIDEGTSNYITGSLSDSTTTIRVGPGSQTRKICIRRGVKQG 204
Query: 206 CPLSALLYAIATHPLLTYLDHLTSTERLHGL----RLPSGHTFVGQAYADDSLFMPRN 45
PLS L+ LL L ST + G ++P A+ADD L + N
Sbjct: 205 DPLSPFLFNAVLDELLC---SLQSTPGIGGTIGEEKIPV------LAFADDLLLLEDN 253
>sp|Q03278|PO21_NASVI Retrovirus-related Pol polyprotein from type-1
retrotransposable element R2 (Fragment) OS=Nasonia
vitripennis PE=4 SV=2
Length = 1025
Score = 34.7 bits (78), Expect = 0.34
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Frame = -3
Query: 545 KMLVHRIKDHLFAGLRQAQYDFIPRRQIMDNVA--NVMIGMEYAKYTQQDVLVVDIEKAF 372
++L +RI +H RQ FI + +N + + MI K + ++D++KAF
Sbjct: 404 RILANRIGEHGLLDTRQRA--FIVADGVAENTSLLSAMIKEARMKIKGLYIAILDVKKAF 461
Query: 371 DTVQWDFIAATMRCLGFGPKFANVVYFLYACNTSSGILEGELTESWPLGCL-VRQGCPLS 195
D+V+ I +R + N + ++Y N+ + + + W VRQG PLS
Sbjct: 462 DSVEHRSILDALRRKKLPLEMRNYIMWVYR-NSKTRLEVVKTKGRWIRPARGVRQGDPLS 520
Query: 194 ALLYAIATHPLLTYLDHLT 138
LL+ +L L T
Sbjct: 521 PLLFNCVMDAVLRRLPENT 539
>sp|Q9W497|GR05A_DROME Gustatory receptor for trehalose
OS=Drosophila melanogaster GN=Tre PE=1 SV=2
Length = 444
Score = 31.2 bits (69), Expect = 3.7
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = -3
Query: 563 LQVLLAKMLVHRIKDHLFAGLRQAQYDFIPRRQIMDNVANVMIG-----MEYAKYTQQDV 399
L+++ +LV + +HL + + YDF PRR D V + ++G E Y+
Sbjct: 176 LKLVAFVLLVVSLMEHLLSIISVVYYDFCPRRS--DPVESYLLGASAQLFEVFPYSNWLA 233
Query: 398 LVVDIEKAFDTVQWDFIAATMRCLGFG 318
+ I+ T W ++ + LG G
Sbjct: 234 WLGKIQNVLLTFGWSYMDIFLMMLGMG 260
>sp|Q2A865|S6A19_RAT Sodium-dependent neutral amino acid transporter
B(0) OS=Rattus norvegicus GN=Slc6a19 PE=2 SV=2
Length = 634
Score = 30.8 bits (68), Expect = 4.9
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -3
Query: 434 GMEYAKYTQQDVLVVDIEKAFDTVQWDFIAATM-RCLGFGPKFANVVYFLYACNTSSGIL 258
G+E + ++ V++ E+A +WD A M C+GF NV F Y C + G
Sbjct: 10 GLEDRIPSLDELEVIEKEEASSRPKWDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGG-- 67
Query: 257 EGELTESWPLGCLVRQGCPLSALLYAI 177
G + L LV +G PL L +AI
Sbjct: 68 -GAFMIPF-LILLVLEGIPLLHLEFAI 92
>sp|P16425|Y2R2_DROME Putative 115 kDa protein in type-1
retrotransposable element R1DM OS=Drosophila
melanogaster PE=4 SV=1
Length = 1021
Score = 30.4 bits (67), Expect = 6.4
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Frame = -3
Query: 554 LLAKMLVHRIKDHLFAGLRQAQYDFIPRRQIMDNVANVM--IGMEYAKYTQQDVLVVDIE 381
+L ++V+R+++ L G R Q+ F R + D +V +G A+Y VD +
Sbjct: 524 VLEAIMVNRVREVLPEGCRW-QFGFRQGRCVEDAWRHVKSSVGASAAQYVLGTF--VDFK 580
Query: 380 KAFDTVQWDFIAATMRCLGFGPKFANVVYFLYA-----CNTSSGILEGELTESWPLGCL 219
AFD V+W AA R G + + ++ +SSG +E +T P G +
Sbjct: 581 GAFDNVEWS--AALSRLADLGCREMGLWQSFFSGRRAVIRSSSGTVEVPVTRGCPQGSI 637
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q76IL7 |
| Definition |
tr|Q76IL7|Q76IL7_DANRE Pol-like protein OS=Danio rerio |
| Align length |
185 |
| Score (bit) |
90.5 |
| E-value |
6.0e-17 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914213|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_D03.
(568 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q76IL7|Q76IL7_DANRE Pol-like protein OS=Danio rerio GN=ORF2 P... 91 6e-17
tr|Q0DC48|Q0DC48_ORYSJ Os06g0484800 protein OS=Oryza sativa subs... 80 8e-14
tr|A3BBV4|A3BBV4_ORYSJ Putative uncharacterized protein OS=Oryza... 80 8e-14
tr|Q76B32|Q76B32_TETNG Reverse transcriptase OS=Tetraodon nigrov... 79 1e-13
tr|Q0DJP0|Q0DJP0_ORYSJ Os05g0247600 protein OS=Oryza sativa subs... 79 2e-13
tr|Q76B34|Q76B34_FUGRU Reverse transcriptase OS=Fugu rubripes GN... 78 3e-13
tr|Q7F805|Q7F805_ORYSJ Similar to Arabidopsis thaliana chromosom... 78 3e-13
tr|Q8S6P1|Q8S6P1_ORYSJ Putative reverse transcriptase OS=Oryza s... 78 4e-13
tr|Q7G3D9|Q7G3D9_ORYSJ Retrotransposon protein, putative, unclas... 78 4e-13
tr|Q2QQV8|Q2QQV8_ORYSJ Retrotransposon protein, putative, unclas... 77 5e-13
tr|A5Z0F6|A5Z0F6_PIG Endonuclease/reverse transcriptase OS=Sus s... 77 5e-13
tr|Q9SKJ4|Q9SKJ4_ARATH Putative non-LTR retroelement reverse tra... 77 9e-13
tr|Q9SIQ5|Q9SIQ5_ARATH Putative non-LTR retroelement reverse tra... 77 9e-13
tr|Q76IM1|Q76IM1_DANRE Pol-like protein OS=Danio rerio GN=ORF2 P... 76 1e-12
tr|O64428|O64428_CHLVU Reverse transcriptase OS=Chlorella vulgar... 76 1e-12
tr|Q7KZ41|Q7KZ41_HUMAN Putative uncharacterized protein (Fragmen... 76 1e-12
tr|Q76IL3|Q76IL3_DANRE Pol-like protein OS=Danio rerio GN=ORF2 P... 76 1e-12
tr|A3C3Z9|A3C3Z9_ORYSJ Putative uncharacterized protein OS=Oryza... 76 1e-12
tr|Q1L835|Q1L835_BOVIN Endonuclease reverse transcriptase OS=Bos... 76 1e-12
tr|Q76IL5|Q76IL5_DANRE Pol-like protein OS=Danio rerio GN=ORF2 P... 75 2e-12
tr|Q3LRV0|Q3LRV0_MAIZE Reverse transcriptase (Fragment) OS=Zea m... 75 2e-12
tr|A3QS88|A3QS88_PANTR Endonuclease/reverse transcriptase OS=Pan... 75 2e-12
tr|O00370|O00370_HUMAN Putative p150 OS=Homo sapiens PE=4 SV=1 75 2e-12
tr|Q5VSW2|Q5VSW2_ORYSA OSJNBa0009P12.14 protein OS=Oryza sativa ... 75 2e-12
tr|Q572K4|Q572K4_PHYIN Reverse transcriptase, putative OS=Phytop... 75 2e-12
tr|Q01HH7|Q01HH7_ORYSA OSIGBa0142I02-OSIGBa0101B20.12 protein OS... 75 2e-12
tr|Q8TE30|Q8TE30_HUMAN Putative uncharacterized protein OS=Homo ... 75 2e-12
tr|O00549|O00549_HUMAN ORF2-like protein (Fragment) OS=Homo sapi... 75 2e-12
tr|O00378|O00378_HUMAN Putative p150 OS=Homo sapiens PE=4 SV=1 75 2e-12
tr|O00375|O00375_HUMAN Putative p150 OS=Homo sapiens PE=4 SV=1 75 2e-12
>tr|Q76IL7|Q76IL7_DANRE Pol-like protein OS=Danio rerio GN=ORF2 PE=4
SV=1
Length = 1284
Score = 90.5 bits (223), Expect = 6e-17
Identities = 61/185 (32%), Positives = 99/185 (53%), Gaps = 2/185 (1%)
Frame = -3
Query: 554 LLAKMLVHRIKDHLFAGLRQAQYDFIPRRQIMDNVANVMIGMEYAKYTQQD--VLVVDIE 381
+LAK+L +R+K+ + + ++ Q I R I D ++ + Y Q+D ++ +D E
Sbjct: 551 ILAKVLANRLKEVMPSIIKTNQAYSIKGRDIADTTMSIKDTIRYINDKQKDGFLISLDFE 610
Query: 380 KAFDTVQWDFIAATMRCLGFGPKFANVVYFLYACNTSSGILEGELTESWPLGCLVRQGCP 201
KAFD V+ DF+ ++ GFG F V LY + G LT+ + + +RQGCP
Sbjct: 611 KAFDRVEHDFLFGVLKSFGFGENFIKWVQILYRGAVTRIKCNGFLTDCFKIRRSIRQGCP 670
Query: 200 LSALLYAIATHPLLTYLDHLTSTERLHGLRLPSGHTFVGQAYADDSLFMPRN*QAVVKVI 21
LSALLYA+ PL + H +R+ G+ + G + Q YADD+ + ++ A VK
Sbjct: 671 LSALLYALVAEPLGLAVKH---EDRIKGIEVEGGVNKIFQ-YADDTTLILQD-LASVKQA 725
Query: 20 MEALE 6
ME ++
Sbjct: 726 METVQ 730
>tr|Q0DC48|Q0DC48_ORYSJ Os06g0484800 protein OS=Oryza sativa subsp.
japonica GN=Os06g0484800 PE=4 SV=1
Length = 1661
Score = 80.1 bits (196), Expect = 8e-14
Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 5/168 (2%)
Frame = -3
Query: 554 LLAKMLVHRIKDHLFAGLRQAQYDFIPRRQIMDNVA---NVMIGMEYAKYTQQDVLV-VD 387
+LAK + +RIK L + +Q+ FIP R+I +N+ ++ Y L+ +D
Sbjct: 1063 ILAKSIANRIKGKLPDFICDSQHAFIPGRRIANNIIIAQEIVHSFGLNSYPHHAFLIKID 1122
Query: 386 IEKAFDTVQWDFIAATMRCLGFGPKFANVVYFLYACNTSSGILEGELTESWPLGCLVRQG 207
+ KAFD ++WDFIA ++ GF F N+V ++ S + G+ ++ +RQG
Sbjct: 1123 LSKAFDRLEWDFIANALQRKGFHHHFINLVLSCINSSSFSVNINGQTYGAFNANRGIRQG 1182
Query: 206 CPLSALLYAIATHPLLTYLDHLTSTERLHGLRLP-SGHTFVGQAYADD 66
CPLS L+ A + L L+ ++G++L SG YADD
Sbjct: 1183 CPLSPYLFCFALNELSDQLNEALQNHNINGIKLSVSGAVIHSLLYADD 1230
>tr|A3BBV4|A3BBV4_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_020526 PE=4 SV=1
Length = 935
Score = 80.1 bits (196), Expect = 8e-14
Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 5/168 (2%)
Frame = -3
Query: 554 LLAKMLVHRIKDHLFAGLRQAQYDFIPRRQIMDNVA---NVMIGMEYAKYTQQDVLV-VD 387
+LAK + +RIK L + +Q+ FIP R+I +N+ ++ Y L+ +D
Sbjct: 337 ILAKSIANRIKGKLPDFICDSQHAFIPGRRIANNIIIAQEIVHSFGLNSYPHHAFLIKID 396
Query: 386 IEKAFDTVQWDFIAATMRCLGFGPKFANVVYFLYACNTSSGILEGELTESWPLGCLVRQG 207
+ KAFD ++WDFIA ++ GF F N+V ++ S + G+ ++ +RQG
Sbjct: 397 LSKAFDRLEWDFIANALQRKGFHHHFINLVLSCINSSSFSVNINGQTYGAFNANRGIRQG 456
Query: 206 CPLSALLYAIATHPLLTYLDHLTSTERLHGLRLP-SGHTFVGQAYADD 66
CPLS L+ A + L L+ ++G++L SG YADD
Sbjct: 457 CPLSPYLFCFALNELSDQLNEALQNHNINGIKLSVSGAVIHSLLYADD 504
>tr|Q76B32|Q76B32_TETNG Reverse transcriptase OS=Tetraodon
nigroviridis GN=ORF2 PE=4 SV=1
Length = 1119
Score = 79.3 bits (194), Expect = 1e-13
Identities = 53/152 (34%), Positives = 79/152 (51%), Gaps = 2/152 (1%)
Frame = -3
Query: 554 LLAKMLVHRIKDHLFAGLRQAQYDFIPRRQIMDNVANVMIGMEYAKYTQQDVLVV--DIE 381
L +K+L R+ L + Q IP R+I D++ + + YA+ ++V+ D E
Sbjct: 529 LFSKLLATRMSMFLEEVIHPDQACAIPGRKITDSLVLIRDTICYARDRNMRLVVLNLDFE 588
Query: 380 KAFDTVQWDFIAATMRCLGFGPKFANVVYFLYACNTSSGILEGELTESWPLGCLVRQGCP 201
KAFD V ++ + +GF +F V LY TS ++ G LT++ + C VRQGCP
Sbjct: 589 KAFDRVSHQYLFRVLEKMGFPARFIAWVGLLYKDITSKILVNGHLTKAVDINCGVRQGCP 648
Query: 200 LSALLYAIATHPLLTYLDHLTSTERLHGLRLP 105
LSALLY PL L +R+ G+RLP
Sbjct: 649 LSALLYVACIEPLAQV---LRRDQRITGVRLP 677
>tr|Q0DJP0|Q0DJP0_ORYSJ Os05g0247600 protein OS=Oryza sativa subsp.
japonica GN=Os05g0247600 PE=4 SV=1
Length = 460
Score = 79.0 bits (193), Expect = 2e-13
Identities = 54/168 (32%), Positives = 95/168 (56%), Gaps = 3/168 (1%)
Frame = -3
Query: 554 LLAKMLVHRIKDHLFAGLRQAQYDFIPRRQIMDNVANVMIGMEYAKYTQQDVLVV--DIE 381
LL K+L R++ + + Q QY FI R I D +A + ++++++++++ D E
Sbjct: 242 LLTKVLADRLQSVIIELIHQNQYGFIKARNIQDCLAWSFEYLHQCQHSKREIVLLKLDFE 301
Query: 380 KAFDTVQWDFIAATMRCLGFGPKFANVVYFLYACNTSSGILEGELTESWPLGCLVRQGCP 201
KAFDT++ I MR GF PK+ + + +++ +SS IL G L +S+ VRQG P
Sbjct: 302 KAFDTIEHSVILDIMRQKGFDPKWISWISHIFSSASSSVILNGVLGKSFYCKRGVRQGDP 361
Query: 200 LSALLYAIATHPLLTYLDHLTSTERLHGLRLPS-GHTFVGQAYADDSL 60
LS LL+ + LL + + ++ + + +P+ G+ F+ YADD+L
Sbjct: 362 LSPLLFVLGA-DLLQSIVNKACSQGVLTMPIPTPGNEFLIVQYADDTL 408
>tr|Q76B34|Q76B34_FUGRU Reverse transcriptase OS=Fugu rubripes
GN=ORF2 PE=4 SV=1
Length = 1154
Score = 78.2 bits (191), Expect = 3e-13
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 2/152 (1%)
Frame = -3
Query: 554 LLAKMLVHRIKDHLFAGLRQAQYDFIPRRQIMDNVANVMIGMEYAKYTQQDVLVV--DIE 381
L +++L R+ L + Q IP R+I D++ + + YA+ ++V+ D E
Sbjct: 529 LFSRLLATRMSTFLEEVIDPDQACAIPGRKITDSLVLIRDTICYARDRNMRLVVLNLDFE 588
Query: 380 KAFDTVQWDFIAATMRCLGFGPKFANVVYFLYACNTSSGILEGELTESWPLGCLVRQGCP 201
KAFD V ++ ++ +GF +F V LY TS + G LT++ + C VRQGCP
Sbjct: 589 KAFDRVSHQYLFQVLQKMGFPERFVAWVGLLYRDITSRILFNGHLTKAVDINCGVRQGCP 648
Query: 200 LSALLYAIATHPLLTYLDHLTSTERLHGLRLP 105
LSALLY I PL L +R++G+++P
Sbjct: 649 LSALLYVICIEPLAQI---LRRDKRINGVQVP 677
>tr|Q7F805|Q7F805_ORYSJ Similar to Arabidopsis thaliana chromosome
II BAC F13B15 OS=Oryza sativa subsp. japonica PE=4 SV=1
Length = 985
Score = 78.2 bits (191), Expect = 3e-13
Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 2/169 (1%)
Frame = -3
Query: 563 LQVLLAKMLVHRIKDHLFAGLRQAQYDFIPRRQIMDNVANV--MIGMEYAKYTQQDVLVV 390
++ L++K+L R++ H+ A + QAQ FI RR I DN V + + T +L +
Sbjct: 322 IEKLISKVLALRLQPHMGALISQAQSAFIKRRSIHDNFMYVHNLARKFHQTRTPTLLLKL 381
Query: 389 DIEKAFDTVQWDFIAATMRCLGFGPKFANVVYFLYACNTSSGILEGELTESWPLGCLVRQ 210
DI KAFD+V+WD++ ++ GF K+ N + L +T+ +L G G +RQ
Sbjct: 382 DISKAFDSVRWDYLIDLLQRKGFTSKWTNWITNLLVSSTTRVLLNGCPGVPIKHGRGLRQ 441
Query: 209 GCPLSALLYAIATHPLLTYLDHLTSTERLHGLRLPSGHTFVGQAYADDS 63
G PLS LL+ +A PL L+ T L LR F YADD+
Sbjct: 442 GDPLSPLLFILAIDPLHHLLEKATDLGLLTALR-GRAPRFRTSLYADDA 489
>tr|Q8S6P1|Q8S6P1_ORYSJ Putative reverse transcriptase OS=Oryza sativa
subsp. japonica GN=OSJNBa0073L01.7 PE=4 SV=1
Length = 1509
Score = 77.8 bits (190), Expect = 4e-13
Identities = 57/179 (31%), Positives = 85/179 (47%), Gaps = 9/179 (5%)
Frame = -3
Query: 557 VLLAKMLVHRIKDHLFAGLRQAQYDFIPRRQIMDNVANVMIGMEYAKYTQQD-------- 402
VL+ K+L +R+K L + AQ F+P R I DN+ +I E Y +
Sbjct: 716 VLIPKVLANRLKKILPDVISPAQSAFVPGRLISDNI---LIAYEMTHYMRNKRSGQVGYA 772
Query: 401 VLVVDIEKAFDTVQWDFIAATMRCLGFGPKFANVVYFLYACNTSSGILEGELTESWPLGC 222
+D+ KA+D V+W F+ M LGF + N++ + T + GEL+ES+
Sbjct: 773 AFKLDMSKAYDRVEWSFLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPER 832
Query: 221 LVRQGCPLSALLYAIATHPLLTYLDHLTSTERLHGLRLPSGHTFVGQ-AYADDSLFMPR 48
+RQG PLS L+ + L RLHG+R+ G V +ADDSL + R
Sbjct: 833 GLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCR 891
>tr|Q7G3D9|Q7G3D9_ORYSJ Retrotransposon protein, putative,
unclassified OS=Oryza sativa subsp. japonica
GN=LOC_Os10g21850 PE=4 SV=1
Length = 1505
Score = 77.8 bits (190), Expect = 4e-13
Identities = 57/179 (31%), Positives = 85/179 (47%), Gaps = 9/179 (5%)
Frame = -3
Query: 557 VLLAKMLVHRIKDHLFAGLRQAQYDFIPRRQIMDNVANVMIGMEYAKYTQQD-------- 402
VL+ K+L +R+K L + AQ F+P R I DN+ +I E Y +
Sbjct: 712 VLIPKVLANRLKKILPDVISPAQSAFVPGRLISDNI---LIAYEMTHYMRNKRSGQVGYA 768
Query: 401 VLVVDIEKAFDTVQWDFIAATMRCLGFGPKFANVVYFLYACNTSSGILEGELTESWPLGC 222
+D+ KA+D V+W F+ M LGF + N++ + T + GEL+ES+
Sbjct: 769 AFKLDMSKAYDRVEWSFLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPER 828
Query: 221 LVRQGCPLSALLYAIATHPLLTYLDHLTSTERLHGLRLPSGHTFVGQ-AYADDSLFMPR 48
+RQG PLS L+ + L RLHG+R+ G V +ADDSL + R
Sbjct: 829 GLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCR 887
>tr|Q2QQV8|Q2QQV8_ORYSJ Retrotransposon protein, putative,
unclassified OS=Oryza sativa subsp. japonica
GN=LOC_Os12g29700 PE=4 SV=1
Length = 1621
Score = 77.4 bits (189), Expect = 5e-13
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Frame = -3
Query: 554 LLAKMLVHRIKDHLFAGLRQAQYDFIPRRQIMDNVANVMIGMEYAKYTQQD--------V 399
L++K+L +R+K L + AQ F+P R I DN+ +I E Y +
Sbjct: 772 LVSKVLANRLKKILPDVISPAQSAFVPGRLISDNI---LIADEMTHYMRNKRSGQVGYAA 828
Query: 398 LVVDIEKAFDTVQWDFIAATMRCLGFGPKFANVVYFLYACNTSSGILEGELTESWPLGCL 219
+D+ KA+D V+W F+ + LGF + N++ + T + GEL+ES+ G
Sbjct: 829 FKLDMSKAYDRVEWSFLHDMILKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPGRG 888
Query: 218 VRQGCPLSALLYAIATHPLLTYLDHLTSTERLHGLRLPSGHTFVGQ-AYADDSLFMPR 48
+RQG PLS L+ + L RLHG+R+ G V +ADDSL + R
Sbjct: 889 LRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCR 946
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