BP914218
Clone id YMU001_000056_D08
Library
Length 491
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000056_D08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CAAGAATACAAGGGCACTTTTTATACATTCAAGAACACAAAATCGTTCAAATCTTGAGCC
TACTGATACTTGAACACCATAAGCAAGGCCATTAATGACAAGATTTATGGGCGCTCGTAA
GCTTCCAAACATGCTCCCTCTAATTGTGGCCACCTTAAAATGATGTCCAAACCCTGCTAA
AAGATTTGAATAGCGAGTACAATTGGAGGAGGAGGAGGAGATAAATTTGGAGAAGTTCAT
GTCAAGCCTGCAGGCCTTTGATAGGTTGAGGACAGTATAGCTACCAGCTCATCTTCAGCA
TCGAGGGAGTGGAGAAAGGGACGGTGAGAAGAGGTGTAACTCATCATGATGGGTGGCGCT
AGCTCTCAGGAATCTGCCCACCATCCCACACTGTTCGGCTATCAAAAGGGAGGCCTTCTA
ACCTTTTCAACTCTTCTAATTCTACACGAGCATAGCTGAGGGTGAGAACATAGAGGATTT
GCAGCCCAAGT
■■Homology search results ■■ -
sp_hit_id Q9SKP6
Definition sp|Q9SKP6|TPIC_ARATH Triosephosphate isomerase, chloroplastic OS=Arabidopsis thaliana
Align length 39
Score (bit) 29.6
E-value 7.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914218|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_D08.
(491 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9SKP6|TPIC_ARATH Triosephosphate isomerase, chloroplastic OS... 30 7.8
sp|Q8J1L4|DPP5_TRISH Dipeptidyl-peptidase 5 OS=Trichophyton scho... 30 7.8
sp|Q8J1M3|DPP5_ARTBE Dipeptidyl-peptidase 5 OS=Arthroderma benha... 30 7.8

>sp|Q9SKP6|TPIC_ARATH Triosephosphate isomerase, chloroplastic
OS=Arabidopsis thaliana GN=TIM PE=1 SV=1
Length = 315

Score = 29.6 bits (65), Expect = 7.8
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -1

Query: 362 LAPPIMMSYTSSHRPFLHSLDAEDELVAILSSTYQRPAG 246
++P + + SSH+ F H +++ LV+ SS+++ P G
Sbjct: 18 ISPKLDAAAVSSHQSFFHRVNSSTRLVSSSSSSHRSPRG 56


>sp|Q8J1L4|DPP5_TRISH Dipeptidyl-peptidase 5 OS=Trichophyton
schoenleinii GN=DPPV PE=1 SV=1
Length = 726

Score = 29.6 bits (65), Expect = 7.8
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = -3

Query: 171 FGHHFKVATIRGSMFGSLRAPINLVINGLAYGVQVSVGSRFERFCVLECIKSALVF 4
FG+ +K ++ G+ G A IN + YG + G + E + SA ++
Sbjct: 115 FGNAYKAGSVNGAFSGLKLAKAGDKINFVGYGQSTTKGDLYNEAAAKEAVSSARIY 170


>sp|Q8J1M3|DPP5_ARTBE Dipeptidyl-peptidase 5 OS=Arthroderma
benhamiae GN=DPPV PE=1 SV=1
Length = 726

Score = 29.6 bits (65), Expect = 7.8
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = -3

Query: 171 FGHHFKVATIRGSMFGSLRAPINLVINGLAYGVQVSVGSRFERFCVLECIKSALVF 4
FG+ +K ++ G+ G A IN + YG + G + E + SA ++
Sbjct: 115 FGNAYKAGSVNGAFSGLKLAKAGDKINFVGYGQSTTKGDLYNEAAAKEAVSSARIY 170


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914218|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_D08.
(491 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******