BP914223
Clone id YMU001_000056_E02
Library
Length 492
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000056_E02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GGCAAATGTCGTGGGAGGGGGACATTGAGTGTACTCTGACAAAGCAGCTGCAGAGCAGAG
AAAAAGGTTAACAGGTTAGTGAAAATTATGAGCGTTGACATGCCATCTCACATGCCGTGC
ACTTAGTTCATTGTCCGCAAAATGCGTCAATGTCGACGTGGTGTGCATCTAAGCGTTGCA
ACAGTCCATTTCACACAAGAATGTTGAGTCAATGGATGGCATTGATCGCGTGCCTCTGAC
TCACGACTTTTGACGGTTGAGACCGCTGCTCGAAAAAATATATTTTCCAAAAAACTTGGA
AAACCTATATACGAAAACTTTGAGAAGTAAGGAGCCAGTAGATCTCCCCAATCGCGAAAA
ATTAAAAATCCTTTCAAAACATCTCGGGTGTGTAAGTGAAGGGAGAGTTTAGGAAATGAA
AAGACAATGGAGGTGGAAAATCAATAGACTATTTGTGTGCATATATGATCGGATGCACCT
TATACATTTGTC
■■Homology search results ■■ -
sp_hit_id P43554
Definition sp|P43554|SWP82_YEAST SWI/SNF global transcription activator complex component SWP82 OS=Saccharomyces cerevisiae
Align length 59
Score (bit) 34.3
E-value 0.31
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914223|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_E02.
(492 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P43554|SWP82_YEAST SWI/SNF global transcription activator com... 34 0.31
sp|P30279|CCND2_HUMAN G1/S-specific cyclin-D2 OS=Homo sapiens GN... 31 2.7
sp|P47022|YJL8_YEAST Uncharacterized protein YJL118W OS=Saccharo... 30 7.8

>sp|P43554|SWP82_YEAST SWI/SNF global transcription activator
complex component SWP82 OS=Saccharomyces cerevisiae
GN=SWP82 PE=1 SV=1
Length = 623

Score = 34.3 bits (77), Expect = 0.31
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -2

Query: 425 VFSFPKLSLHLHTRDVLKGFLIFRDWGDLLAPYFSKFSY--IGFPSFLENIFFRAAVST 255
VF PK+ + H R +LK L D +L+ P KF Y + P +++ + R A +T
Sbjct: 27 VFIVPKILIREHERVILKQILQILDQDELVQPPLDKFPYKKLELPKYIDELKTRDATNT 85


>sp|P30279|CCND2_HUMAN G1/S-specific cyclin-D2 OS=Homo sapiens
GN=CCND2 PE=1 SV=1
Length = 289

Score = 31.2 bits (69), Expect = 2.7
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2

Query: 107 LTCRALSSLSAKCVNVDVVCI*ALQQSI 190
LTC AL+ L AK N DV C+ A Q+ I
Sbjct: 223 LTCDALTELLAKITNTDVDCLKACQEQI 250


>sp|P47022|YJL8_YEAST Uncharacterized protein YJL118W
OS=Saccharomyces cerevisiae GN=YJL118W PE=4 SV=1
Length = 219

Score = 29.6 bits (65), Expect = 7.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2

Query: 266 AVSTVKSRESEARDQCHPLTQHSCVK 189
AV VK R++E R C P+ QH+ VK
Sbjct: 110 AVLRVKKRKTEERQPCSPIIQHTHVK 135


tr_hit_id B5VHX7
Definition tr|B5VHX7|B5VHX7_YEAS6 YFL049Wp-like protein OS=Saccharomyces cerevisiae (strain AWRI1631)
Align length 59
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914223|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_E02.
(492 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B5VHX7|B5VHX7_YEAS6 YFL049Wp-like protein OS=Saccharomyces ce... 34 3.2
tr|A7A1Z0|A7A1Z0_YEAS7 Swi/snf-associated protein OS=Saccharomyc... 34 3.2
tr|B6PKB7|B6PKB7_BRAFL Putative uncharacterized protein OS=Branc... 34 4.2
tr|Q7PVW3|Q7PVW3_ANOGA AGAP009167-PA OS=Anopheles gambiae GN=AGA... 33 9.3

>tr|B5VHX7|B5VHX7_YEAS6 YFL049Wp-like protein OS=Saccharomyces
cerevisiae (strain AWRI1631) GN=AWRI1631_60090 PE=4 SV=1
Length = 621

Score = 34.3 bits (77), Expect = 3.2
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -2

Query: 425 VFSFPKLSLHLHTRDVLKGFLIFRDWGDLLAPYFSKFSY--IGFPSFLENIFFRAAVST 255
VF PK+ + H R +LK L D +L+ P KF Y + P +++ + R A +T
Sbjct: 27 VFIVPKILIREHERVILKQILQILDQDELVQPPLDKFPYKKLELPKYIDELKTRDATNT 85


>tr|A7A1Z0|A7A1Z0_YEAS7 Swi/snf-associated protein OS=Saccharomyces
cerevisiae (strain YJM789) GN=SWP82 PE=4 SV=1
Length = 623

Score = 34.3 bits (77), Expect = 3.2
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -2

Query: 425 VFSFPKLSLHLHTRDVLKGFLIFRDWGDLLAPYFSKFSY--IGFPSFLENIFFRAAVST 255
VF PK+ + H R +LK L D +L+ P KF Y + P +++ + R A +T
Sbjct: 27 VFIVPKILIREHERVILKQILQILDQDELVQPPLDKFPYKKLELPKYIDELKTRDATNT 85


>tr|B6PKB7|B6PKB7_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_107976 PE=4 SV=1
Length = 492

Score = 33.9 bits (76), Expect = 4.2
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = +2

Query: 101 CHLTCRALSSLSAKCVNVDVVCI*A-LQQSISHKNVESMDGIDRVPLTHDF*RLRPLLEK 277
C CR S +C+N D++ I + Q++ +DG + + P L++
Sbjct: 34 CPSVCRCPSGTEVRCINKDLIAIPPNIPQTVQKL---YLDGNRIAEINNSHIAALPNLKE 90

Query: 278 IYFPKNLENLYTKTLRSKEPVDLPNREKLKILSKHLGCV 394
+Y P+N KT+ + +LPN E L + S ++ V
Sbjct: 91 LYIPRN----DLKTVPGQTFANLPNLEILSLASNNISFV 125


>tr|Q7PVW3|Q7PVW3_ANOGA AGAP009167-PA OS=Anopheles gambiae
GN=AGAP009167 PE=4 SV=4
Length = 1193

Score = 32.7 bits (73), Expect = 9.3
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -2

Query: 314 SYIGFPSFLENIFFRAAVSTVKSRESEAR-DQCHPLTQHSC 195
S+ G S L +I ++A VS V ES + DQCH TQ++C
Sbjct: 456 SFGGLQSSLPDIAYKAGVSKVVRFESSTKADQCHVDTQYTC 496