| BP914227 |
| Clone id |
YMU001_000056_E06 |
| Library |
YMU01 |
| Length |
583 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000056_E06. |
| Accession |
BP914227 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL3239Contig1 |
| Sequence |
ATGTCGAACTAGACGAACAGCAGATAGAGAAGGTATCTCGGCAAAGAATGGCGTGATTGG AGCTGAGAGTGGTTCAAAAGGCATTCAACAGACTGATATGTTTTCAAATCAATCCATCAA CTCCAAAGGTTCCGTCACTTCTAGTGCAAATAAACCACTAGATGACAGACTATAAGAAAA GATTCTTCTCCTGTGTGGACCTCCAGGGCTTGGTAAAACAACTCTTGCTCATGTTGCTGC AAGGCATTGTGGATACCGAGTTGTTGAGATAAATGCAAGTGATGATCGGGTGTTGTCAAC CTTGCAAGCAAAAATATTGGATGCAGTTCAAATGAAATCTGTCATGGGTGATTTAAGACC CAATTGTGTGGTGATTGATGAAATTGATGGAGCACTTGGAGGTGCAGATGGAAAGGGTGC GATAGATGCTCTCTTGAAAATTGCTTATGCTGGAACAAAGGAACTTTCAGGGAAGGTGAA CGAGAAAGATGAAGCAGTGATTAAGAAGGCATCCAAAAAGAACACATCCACAACTGCGAC ACTTTCACGACCTGTTATTTGCATCTGCAATGATCCATATGCT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q6NU40 |
| Definition |
sp|Q6NU40|CTF18_XENLA Chromosome transmission fidelity protein 18 homolog OS=Xenopus laevis |
| Align length |
138 |
| Score (bit) |
109.0 |
| E-value |
1.0e-23 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9RCL3 |
| Definition |
tr|A9RCL3|A9RCL3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
177 |
| Score (bit) |
157.0 |
| E-value |
5.0e-37 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914227|Adiantum capillus-veneris mRNA, clone: YMU001_000056_E06. (583 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RCL3|A9RCL3_PHYPA Predicted protein OS=Physcomitrella paten... 157 5e-37 tr|Q84QB4|Q84QB4_ORYSJ Putative uncharacterized protein OJ1012B0... 134 5e-30 tr|Q10NN1|Q10NN1_ORYSJ ATPase, AAA family protein, expressed OS=... 134 5e-30 tr|Q0DT80|Q0DT80_ORYSJ Os03g0264800 protein OS=Oryza sativa subs... 134 5e-30 tr|B8AKQ6|B8AKQ6_ORYSI Putative uncharacterized protein OS=Oryza... 134 5e-30 tr|A3AGC1|A3AGC1_ORYSJ Putative uncharacterized protein OS=Oryza... 134 5e-30 tr|A5CB86|A5CB86_VITVI Putative uncharacterized protein OS=Vitis... 133 8e-30 tr|A7R3W8|A7R3W8_VITVI Chromosome undetermined scaffold_582, who... 131 2e-29 tr|A7R4P1|A7R4P1_VITVI Chromosome undetermined scaffold_749, who... 129 1e-28 tr|A7R4I9|A7R4I9_VITVI Chromosome undetermined scaffold_702, who... 120 7e-26 tr|A7R600|A7R600_VITVI Chromosome undetermined scaffold_1105, wh... 118 2e-25 tr|A7R3A1|A7R3A1_VITVI Chromosome undetermined scaffold_496, who... 116 1e-24 tr|A7R4C5|A7R4C5_VITVI Chromosome undetermined scaffold_649, who... 114 4e-24 tr|A7R7D0|A7R7D0_VITVI Chromosome undetermined scaffold_1704, wh... 112 1e-23 tr|A7R624|A7R624_VITVI Chromosome undetermined scaffold_1134, wh... 112 1e-23 tr|O23012|O23012_ARATH T1G11.2 protein OS=Arabidopsis thaliana G... 108 2e-22 tr|A8ISE0|A8ISE0_CHLRE DNA damage repair and chromosome cohesion... 105 1e-21 tr|Q16Z43|Q16Z43_AEDAE Putative uncharacterized protein OS=Aedes... 104 4e-21 tr|Q16Z42|Q16Z42_AEDAE Putative uncharacterized protein OS=Aedes... 104 4e-21 tr|Q5ZHX0|Q5ZHX0_CHICK Putative uncharacterized protein (Fragmen... 103 9e-21 tr|A4S9K8|A4S9K8_OSTLU Predicted protein (Fragment) OS=Ostreococ... 103 9e-21 tr|B0XJM8|B0XJM8_CULQU Chromosome transmission fidelity protein ... 103 9e-21 tr|A7RJV2|A7RJV2_NEMVE Predicted protein (Fragment) OS=Nematoste... 102 2e-20 tr|B3RMJ4|B3RMJ4_TRIAD Putative uncharacterized protein OS=Trich... 100 5e-20 tr|Q96S08|Q96S08_HUMAN Protein CTF18 homolog. OS=Homo sapiens GN... 100 6e-20 tr|Q7Z6Y4|Q7Z6Y4_HUMAN CTF18, chromosome transmission fidelity f... 100 6e-20 tr|B7ZBA2|B7ZBA2_HUMAN CTF18, chromosome transmission fidelity f... 100 6e-20 tr|A5AY69|A5AY69_VITVI Putative uncharacterized protein OS=Vitis... 99 2e-19 tr|B4JQJ0|B4JQJ0_DROGR GH13174 OS=Drosophila grimshawi GN=GH1317... 99 2e-19 tr|B4LRR8|B4LRR8_DROVI GJ17580 OS=Drosophila virilis GN=GJ17580 ... 97 5e-19
>tr|A9RCL3|A9RCL3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_64140 PE=4 SV=1 Length = 1081
Score = 157 bits (396), Expect = 5e-37 Identities = 91/177 (51%), Positives = 105/177 (59%), Gaps = 2/177 (1%) Frame = +2
Query: 59 GAESGSKGIQQTDMFSNQSINSKGS-VTSSANKPLDDRL*EKILLLCGPPGLGKTTLAHV 235 G S + + ++ + N + NS + ++ K DR EK+LLLCGPPGLGKTTLAHV Sbjct: 424 GRGSFNNNVNKSMAYRNDTFNSDSTRKVATEEKSTLDRPEEKVLLLCGPPGLGKTTLAHV 483
Query: 236 AARHCGYRVVEINASDDRVLSTLQAKILDAVQMKSVMGDLRPNCVVIDEXXXXXXXXXXX 415 AARHCGYRVVEINASDDRV +TLQ KILDA+QMKSV GD RPNC+VIDE Sbjct: 484 AARHCGYRVVEINASDDRVATTLQGKILDAIQMKSVTGDNRPNCLVIDEIDGALSGAEGK 543
Query: 416 XXXXXXXKIAYAGTKELSGKVNEKDEAVI-XXXXXXXXXXXXXLSRPVICICNDPYA 583 +I A K GK NE E V LSRPVICICND YA Sbjct: 544 GAIDSLLEIINADKKSSLGKENEMQEGVTKVSSKKTGGSAVRRLSRPVICICNDFYA 600
>tr|Q84QB4|Q84QB4_ORYSJ Putative uncharacterized protein OJ1012B02.7 OS=Oryza sativa subsp. japonica GN=OJ1012B02.7 PE=4 SV=1 Length = 973
Score = 134 bits (336), Expect = 5e-30 Identities = 79/184 (42%), Positives = 96/184 (52%), Gaps = 2/184 (1%) Frame = +2
Query: 38 SAKNGVIGAESGSKGIQQTDMFSNQSINSKGSVTSSANK-PLDDRL*E-KILLLCGPPGL 211 S+ G G+ Q +M N ++ +TSS NK P D E K+LLLCGPPGL Sbjct: 307 SSNRNFFSKSKGGPGMSQDNMLQNAHGSNSEDLTSSFNKRPTTDNAPEQKVLLLCGPPGL 366
Query: 212 GKTTLAHVAARHCGYRVVEINASDDRVLSTLQAKILDAVQMKSVMGDLRPNCVVIDEXXX 391 GKTTLAHVAA+HCGY VVEINASDDR S+++ KILD +QM S+M D +P C+VIDE Sbjct: 367 GKTTLAHVAAKHCGYHVVEINASDDRSASSIEPKILDVIQMNSIMSDSKPKCLVIDE--- 423
Query: 392 XXXXXXXXXXXXXXXKIAYAGTKELSGKVNEKDEAVIXXXXXXXXXXXXXLSRPVICICN 571 + K S + E L RPVICICN Sbjct: 424 -----IDGALGDGKGAVEINAEKNNSSNSSTSAEDTQVRKSSKKGHKIPKLMRPVICICN 478
Query: 572 DPYA 583 D YA Sbjct: 479 DLYA 482
>tr|Q10NN1|Q10NN1_ORYSJ ATPase, AAA family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g15810 PE=4 SV=1 Length = 1002
Score = 134 bits (336), Expect = 5e-30 Identities = 79/184 (42%), Positives = 96/184 (52%), Gaps = 2/184 (1%) Frame = +2
Query: 38 SAKNGVIGAESGSKGIQQTDMFSNQSINSKGSVTSSANK-PLDDRL*E-KILLLCGPPGL 211 S+ G G+ Q +M N ++ +TSS NK P D E K+LLLCGPPGL Sbjct: 307 SSNRNFFSKSKGGPGMSQDNMLQNAHGSNSEDLTSSFNKRPTTDNAPEQKVLLLCGPPGL 366
Query: 212 GKTTLAHVAARHCGYRVVEINASDDRVLSTLQAKILDAVQMKSVMGDLRPNCVVIDEXXX 391 GKTTLAHVAA+HCGY VVEINASDDR S+++ KILD +QM S+M D +P C+VIDE Sbjct: 367 GKTTLAHVAAKHCGYHVVEINASDDRSASSIEPKILDVIQMNSIMSDSKPKCLVIDE--- 423
Query: 392 XXXXXXXXXXXXXXXKIAYAGTKELSGKVNEKDEAVIXXXXXXXXXXXXXLSRPVICICN 571 + K S + E L RPVICICN Sbjct: 424 -----IDGALGDGKGAVEINAEKNNSSNSSTSAEDTQVRKSSKKGHKIPKLMRPVICICN 478
Query: 572 DPYA 583 D YA Sbjct: 479 DLYA 482
>tr|Q0DT80|Q0DT80_ORYSJ Os03g0264800 protein OS=Oryza sativa subsp. japonica GN=Os03g0264800 PE=4 SV=1 Length = 973
Score = 134 bits (336), Expect = 5e-30 Identities = 79/184 (42%), Positives = 96/184 (52%), Gaps = 2/184 (1%) Frame = +2
Query: 38 SAKNGVIGAESGSKGIQQTDMFSNQSINSKGSVTSSANK-PLDDRL*E-KILLLCGPPGL 211 S+ G G+ Q +M N ++ +TSS NK P D E K+LLLCGPPGL Sbjct: 307 SSNRNFFSKSKGGPGMSQDNMLQNAHGSNSEDLTSSFNKRPTTDNAPEQKVLLLCGPPGL 366
Query: 212 GKTTLAHVAARHCGYRVVEINASDDRVLSTLQAKILDAVQMKSVMGDLRPNCVVIDEXXX 391 GKTTLAHVAA+HCGY VVEINASDDR S+++ KILD +QM S+M D +P C+VIDE Sbjct: 367 GKTTLAHVAAKHCGYHVVEINASDDRSASSIEPKILDVIQMNSIMSDSKPKCLVIDE--- 423
Query: 392 XXXXXXXXXXXXXXXKIAYAGTKELSGKVNEKDEAVIXXXXXXXXXXXXXLSRPVICICN 571 + K S + E L RPVICICN Sbjct: 424 -----IDGALGDGKGAVEINAEKNNSSNSSTSAEDTQVRKSSKKGHKIPKLMRPVICICN 478
Query: 572 DPYA 583 D YA Sbjct: 479 DLYA 482
>tr|B8AKQ6|B8AKQ6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10859 PE=4 SV=1 Length = 897
Score = 134 bits (336), Expect = 5e-30 Identities = 79/184 (42%), Positives = 96/184 (52%), Gaps = 2/184 (1%) Frame = +2
Query: 38 SAKNGVIGAESGSKGIQQTDMFSNQSINSKGSVTSSANK-PLDDRL*E-KILLLCGPPGL 211 S+ G G+ Q +M N ++ +TSS NK P D E K+LLLCGPPGL Sbjct: 247 SSNRNFFSKSKGGPGMSQDNMLQNAHGSNSEDLTSSFNKRPTTDNAPEQKVLLLCGPPGL 306
Query: 212 GKTTLAHVAARHCGYRVVEINASDDRVLSTLQAKILDAVQMKSVMGDLRPNCVVIDEXXX 391 GKTTLAHVAA+HCGY VVEINASDDR S+++ KILD +QM S+M D +P C+VIDE Sbjct: 307 GKTTLAHVAAKHCGYHVVEINASDDRSASSIEPKILDVIQMNSIMSDSKPKCLVIDE--- 363
Query: 392 XXXXXXXXXXXXXXXKIAYAGTKELSGKVNEKDEAVIXXXXXXXXXXXXXLSRPVICICN 571 + K S + E L RPVICICN Sbjct: 364 -----IDGALGDGKGAVEINAEKNNSSNSSTSAEDTQVRKSSKKGHKIPKLMRPVICICN 418
Query: 572 DPYA 583 D YA Sbjct: 419 DLYA 422
>tr|A3AGC1|A3AGC1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_009843 PE=4 SV=1 Length = 1350
Score = 134 bits (336), Expect = 5e-30 Identities = 79/184 (42%), Positives = 96/184 (52%), Gaps = 2/184 (1%) Frame = +2
Query: 38 SAKNGVIGAESGSKGIQQTDMFSNQSINSKGSVTSSANK-PLDDRL*E-KILLLCGPPGL 211 S+ G G+ Q +M N ++ +TSS NK P D E K+LLLCGPPGL Sbjct: 307 SSNRNFFSKSKGGPGMSQDNMLQNAHGSNSEDLTSSFNKRPTTDNAPEQKVLLLCGPPGL 366
Query: 212 GKTTLAHVAARHCGYRVVEINASDDRVLSTLQAKILDAVQMKSVMGDLRPNCVVIDEXXX 391 GKTTLAHVAA+HCGY VVEINASDDR S+++ KILD +QM S+M D +P C+VIDE Sbjct: 367 GKTTLAHVAAKHCGYHVVEINASDDRSASSIEPKILDVIQMNSIMSDSKPKCLVIDE--- 423
Query: 392 XXXXXXXXXXXXXXXKIAYAGTKELSGKVNEKDEAVIXXXXXXXXXXXXXLSRPVICICN 571 + K S + E L RPVICICN Sbjct: 424 -----IDGALGDGKGAVEINAEKNNSSNSSTSAEDTQVRKSSKKGHKIPKLMRPVICICN 478
Query: 572 DPYA 583 D YA Sbjct: 479 DLYA 482
>tr|A5CB86|A5CB86_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003510 PE=4 SV=1 Length = 169
Score = 133 bits (334), Expect = 8e-30 Identities = 74/135 (54%), Positives = 81/135 (60%) Frame = +2
Query: 179 KILLLCGPPGLGKTTLAHVAARHCGYRVVEINASDDRVLSTLQAKILDAVQMKSVMGDLR 358 KILLLCGPPGLGKTTLAHVAA+HCGYRVVEINASDDR ST++AKILD VQM SVM D + Sbjct: 26 KILLLCGPPGLGKTTLAHVAAKHCGYRVVEINASDDRSSSTIEAKILDVVQMNSVMADSK 85
Query: 359 PNCVVIDEXXXXXXXXXXXXXXXXXXKIAYAGTKELSGKVNEKDEAVIXXXXXXXXXXXX 538 PNC+VIDE G V + DE+ Sbjct: 86 PNCLVIDEIDGALGDGKGAVEVILKMVSTERKADNRKGNVAKVDES--GQISSKKGHKTA 143
Query: 539 XLSRPVICICNDPYA 583 LSRPVICICND YA Sbjct: 144 SLSRPVICICNDLYA 158
>tr|A7R3W8|A7R3W8_VITVI Chromosome undetermined scaffold_582, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00004020001 PE=4 SV=1 Length = 156
Score = 131 bits (330), Expect = 2e-29 Identities = 73/135 (54%), Positives = 81/135 (60%) Frame = +2
Query: 179 KILLLCGPPGLGKTTLAHVAARHCGYRVVEINASDDRVLSTLQAKILDAVQMKSVMGDLR 358 +ILLLCGPPGLGKTTLAHVAA+HCGYRVVEINASDDR ST++AKILD VQM SVM D + Sbjct: 13 QILLLCGPPGLGKTTLAHVAAKHCGYRVVEINASDDRSSSTIEAKILDVVQMNSVMADSK 72
Query: 359 PNCVVIDEXXXXXXXXXXXXXXXXXXKIAYAGTKELSGKVNEKDEAVIXXXXXXXXXXXX 538 PNC+VIDE G V + DE+ Sbjct: 73 PNCLVIDEIDGALSDGKGAVEVILKMVSTERKADNRKGNVAKVDES--GQISSKKGHKTA 130
Query: 539 XLSRPVICICNDPYA 583 LSRPVICICND YA Sbjct: 131 SLSRPVICICNDLYA 145
>tr|A7R4P1|A7R4P1_VITVI Chromosome undetermined scaffold_749, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00004606001 PE=4 SV=1 Length = 305
Score = 129 bits (324), Expect = 1e-28 Identities = 73/136 (53%), Positives = 81/136 (59%) Frame = +2
Query: 176 EKILLLCGPPGLGKTTLAHVAARHCGYRVVEINASDDRVLSTLQAKILDAVQMKSVMGDL 355 +KILLLCGPPGLGKTTLAHVAA+HCGYRVVEINASDDR S ++AKILD VQM SVM D Sbjct: 139 QKILLLCGPPGLGKTTLAHVAAKHCGYRVVEINASDDRSSSIIEAKILDVVQMNSVMADS 198
Query: 356 RPNCVVIDEXXXXXXXXXXXXXXXXXXKIAYAGTKELSGKVNEKDEAVIXXXXXXXXXXX 535 +PNC+VIDE + G V + VI Sbjct: 199 KPNCLVIDEID--------------------GALGDGKGAVEVILKMVIDMISSKKGHKT 238
Query: 536 XXLSRPVICICNDPYA 583 LSRPVICICND YA Sbjct: 239 ASLSRPVICICNDLYA 254
>tr|A7R4I9|A7R4I9_VITVI Chromosome undetermined scaffold_702, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00004446001 PE=4 SV=1 Length = 149
Score = 120 bits (300), Expect = 7e-26 Identities = 68/130 (52%), Positives = 76/130 (58%) Frame = +2
Query: 182 ILLLCGPPGLGKTTLAHVAARHCGYRVVEINASDDRVLSTLQAKILDAVQMKSVMGDLRP 361 ILLLCGPPGLGKTTLAHVAA+HCGYRVVEINASDDR ST++AKILD VQM SVM D +P Sbjct: 9 ILLLCGPPGLGKTTLAHVAAKHCGYRVVEINASDDRSSSTIKAKILDVVQMNSVMADSKP 68
Query: 362 NCVVIDEXXXXXXXXXXXXXXXXXXKIAYAGTKELSGKVNEKDEAVIXXXXXXXXXXXXX 541 NC+VIDE A G V + + Sbjct: 69 NCLVIDEIDGALGDGKGVVEVILKMVSAERKADNRKGNVAKGYKTT-------------S 115
Query: 542 LSRPVICICN 571 LSRPVICIC+ Sbjct: 116 LSRPVICICS 125
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