BP914230 |
Clone id |
YMU001_000056_E09 |
Library |
YMU01 |
Length |
264 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000056_E09. |
Accession |
BP914230 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ATTCCAATGGTTCCATTTTCCTTCATTTCGCAATCCCCATTTCAAGTGCAATTTAGCTTC ACATTACGGAGATCGTAGTTGCTCTTTTATTCTAATGCAGATTTGCTACTGCAGGGCTAG GTATGAAGATGCCAAGTTTTTCTATCAGTCGGATGTTTCAAAGGCTTTAGTGGATTTTCG CCCACAACTGAAGGGAATTCTTTTTCAAGAGAAGCTAGGTACAATGCTAGATAAGAGCAT CCGAGTGGAGAGGATGATTACAGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8L785 |
Definition |
sp|Q8L785|SYGM2_ARATH Glycyl-tRNA synthetase 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana |
Align length |
50 |
Score (bit) |
69.3 |
E-value |
6.0e-12 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TR89 |
Definition |
tr|A9TR89|A9TR89_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
49 |
Score (bit) |
75.9 |
E-value |
1.0e-12 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914230|Adiantum capillus-veneris mRNA, clone: YMU001_000056_E09. (264 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TR89|A9TR89_PHYPA Predicted protein OS=Physcomitrella paten... 76 1e-12 tr|A7PK96|A7PK96_VITVI Chromosome chr15 scaffold_19, whole genom... 73 8e-12 tr|A9PI70|A9PI70_POPTR Putative uncharacterized protein OS=Popul... 72 1e-11 tr|Q01DM7|Q01DM7_OSTTA Putative aminoacyl-t-RNA synthetase (ISS)... 71 2e-11 tr|A4RTK9|A4RTK9_OSTLU Predicted protein OS=Ostreococcus lucimar... 69 2e-10 tr|Q5VRH2|Q5VRH2_ORYSJ Os06g0103600 protein OS=Oryza sativa subs... 67 6e-10 tr|B8B198|B8B198_ORYSI Putative uncharacterized protein OS=Oryza... 67 6e-10 tr|A3B7J3|A3B7J3_ORYSJ Putative uncharacterized protein OS=Oryza... 67 6e-10 tr|A8IB17|A8IB17_CHLRE Predicted protein OS=Chlamydomonas reinha... 61 2e-08 tr|B5YJ12|B5YJ12_THEYD Glycyl-tRNA synthetase, beta subunit OS=T... 55 2e-06 tr|A4ECI8|A4ECI8_9ACTN Putative uncharacterized protein OS=Colli... 55 2e-06 tr|A5EV43|A5EV43_DICNV Glycyl-tRNA synthetase, beta subunit OS=D... 54 4e-06 tr|B3TCD6|B3TCD6_9CREN Putative glycyl-tRNA synthetase beta subu... 54 4e-06 tr|B3TA95|B3TA95_9CREN Putative glycyl-tRNA synthetase beta subu... 54 4e-06 tr|A4NPZ4|A4NPZ4_HAEIN Glycyl-tRNA synthetase subunit beta OS=Ha... 54 5e-06 tr|A4MWA8|A4MWA8_HAEIN Glycyl-tRNA synthetase subunit beta OS=Ha... 54 5e-06 tr|A0ZCB7|A0ZCB7_NODSP Glycyl and Arginyl tRNA synthetase OS=Nod... 53 7e-06 tr|Q31IS2|Q31IS2_THICR Glycyl-tRNA synthetase, beta subunit OS=T... 53 9e-06 tr|B0ADJ3|B0ADJ3_9CLOT Putative uncharacterized protein OS=Clost... 52 1e-05 tr|A4NCX1|A4NCX1_HAEIN Glycyl-tRNA synthetase beta subunit OS=Ha... 52 1e-05 tr|A4N809|A4N809_HAEIN Glycyl-tRNA synthetase beta subunit OS=Ha... 52 1e-05 tr|A4N1L2|A4N1L2_HAEIN Glycyl-tRNA synthetase beta subunit OS=Ha... 52 1e-05 tr|B2V9P9|B2V9P9_SULSY Glycyl-tRNA synthetase, beta subunit OS=S... 52 2e-05 tr|B6G1Q8|B6G1Q8_9CLOT Putative uncharacterized protein OS=Clost... 51 3e-05 tr|A3WT86|A3WT86_9BRAD Glycyl-tRNA synthetase beta subunit OS=Ni... 51 3e-05 tr|Q3AEY3|Q3AEY3_CARHZ Glycyl-tRNA synthetase, beta subunit OS=C... 51 3e-05 tr|Q20YB5|Q20YB5_RHOPB Glycine--tRNA ligase OS=Rhodopseudomonas ... 50 4e-05 tr|B0JVW9|B0JVW9_MICAN Glycyl-tRNA synthetase beta chain OS=Micr... 50 4e-05 tr|A9FHB3|A9FHB3_SORC5 Glycyl-tRNA synthetase beta chain OS=Sora... 50 4e-05 tr|A7HLX0|A7HLX0_FERNB Glycyl-tRNA synthetase, beta subunit OS=F... 50 4e-05
>tr|A9TR89|A9TR89_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_171503 PE=4 SV=1 Length = 1124
Score = 75.9 bits (185), Expect = 1e-12 Identities = 35/49 (71%), Positives = 42/49 (85%) Frame = +2
Query: 113 RARYEDAKFFYQSDVSKALVDFRPQLKGILFQEKLGTMLDKSIRVERMI 259 RARYEDA+FFY++D SK L D+RP L+GI FQEKLG+MLDKS RVE M+ Sbjct: 758 RARYEDARFFYEADTSKPLADYRPLLQGITFQEKLGSMLDKSKRVEAMV 806
>tr|A7PK96|A7PK96_VITVI Chromosome chr15 scaffold_19, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019071001 PE=4 SV=1 Length = 636
Score = 72.8 bits (177), Expect = 8e-12 Identities = 34/49 (69%), Positives = 39/49 (79%) Frame = +2
Query: 113 RARYEDAKFFYQSDVSKALVDFRPQLKGILFQEKLGTMLDKSIRVERMI 259 RARYEDAKFFY+ D K +FR QL+GILF EKLGTMLDK IRV+ M+ Sbjct: 270 RARYEDAKFFYEMDTRKKFSEFRSQLEGILFHEKLGTMLDKMIRVQNMV 318
>tr|A9PI70|A9PI70_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 512
Score = 72.4 bits (176), Expect = 1e-11 Identities = 35/50 (70%), Positives = 39/50 (78%) Frame = +2
Query: 113 RARYEDAKFFYQSDVSKALVDFRPQLKGILFQEKLGTMLDKSIRVERMIT 262 RARYEDAKFFY+ D K +FR QL GILF EKLGTMLDK +RVE +IT Sbjct: 146 RARYEDAKFFYEMDTRKKFSEFRNQLDGILFHEKLGTMLDKMMRVENVIT 195
>tr|Q01DM7|Q01DM7_OSTTA Putative aminoacyl-t-RNA synthetase (ISS) (Fragment) OS=Ostreococcus tauri GN=Ot02g07010 PE=4 SV=1 Length = 950
Score = 71.2 bits (173), Expect = 2e-11 Identities = 31/50 (62%), Positives = 42/50 (84%) Frame = +2
Query: 113 RARYEDAKFFYQSDVSKALVDFRPQLKGILFQEKLGTMLDKSIRVERMIT 262 RARYEDAKFFY+SD+ K L DF+P+L GI FQ++LG ML+K+ RVE +++ Sbjct: 583 RARYEDAKFFYESDLKKKLADFKPELSGITFQQELGNMLEKTRRVEGLVS 632
>tr|A4RTK9|A4RTK9_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_29834 PE=4 SV=1 Length = 1051
Score = 68.6 bits (166), Expect = 2e-10 Identities = 29/49 (59%), Positives = 42/49 (85%) Frame = +2
Query: 113 RARYEDAKFFYQSDVSKALVDFRPQLKGILFQEKLGTMLDKSIRVERMI 259 RARYEDAKFFY++D++K L +F+P+L GI FQ++LG ML+K+ RVE ++ Sbjct: 684 RARYEDAKFFYETDLNKPLAEFKPELSGITFQQELGNMLEKTQRVEGLV 732
>tr|Q5VRH2|Q5VRH2_ORYSJ Os06g0103600 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0075G19.30-1 PE=4 SV=1 Length = 1068
Score = 66.6 bits (161), Expect = 6e-10 Identities = 32/49 (65%), Positives = 36/49 (73%) Frame = +2
Query: 113 RARYEDAKFFYQSDVSKALVDFRPQLKGILFQEKLGTMLDKSIRVERMI 259 RARYEDAKFFY+ D K L +FR QL ILF E+LGTMLDK RVE + Sbjct: 702 RARYEDAKFFYKMDTQKKLSEFRDQLSSILFHERLGTMLDKMKRVENTV 750
>tr|B8B198|B8B198_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21278 PE=4 SV=1 Length = 1068
Score = 66.6 bits (161), Expect = 6e-10 Identities = 32/49 (65%), Positives = 36/49 (73%) Frame = +2
Query: 113 RARYEDAKFFYQSDVSKALVDFRPQLKGILFQEKLGTMLDKSIRVERMI 259 RARYEDAKFFY+ D K L +FR QL ILF E+LGTMLDK RVE + Sbjct: 702 RARYEDAKFFYKMDTQKKLSEFRDQLSSILFHERLGTMLDKMKRVENTV 750
>tr|A3B7J3|A3B7J3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_019015 PE=4 SV=1 Length = 1122
Score = 66.6 bits (161), Expect = 6e-10 Identities = 32/49 (65%), Positives = 36/49 (73%) Frame = +2
Query: 113 RARYEDAKFFYQSDVSKALVDFRPQLKGILFQEKLGTMLDKSIRVERMI 259 RARYEDAKFFY+ D K L +FR QL ILF E+LGTMLDK RVE + Sbjct: 756 RARYEDAKFFYKMDTQKKLSEFRDQLSSILFHERLGTMLDKMKRVENTV 804
>tr|A8IB17|A8IB17_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_126079 PE=4 SV=1 Length = 1097
Score = 61.2 bits (147), Expect = 2e-08 Identities = 27/49 (55%), Positives = 39/49 (79%) Frame = +2
Query: 113 RARYEDAKFFYQSDVSKALVDFRPQLKGILFQEKLGTMLDKSIRVERMI 259 RAR+EDA FFY+ D+ + L DFRP+L G FQ++LG++L KS RVE+++ Sbjct: 730 RARFEDAAFFYREDLKQPLQDFRPKLSGTTFQKELGSLLAKSDRVEQLV 778
>tr|B5YJ12|B5YJ12_THEYD Glycyl-tRNA synthetase, beta subunit OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=glyS PE=4 SV=1 Length = 679
Score = 55.1 bits (131), Expect = 2e-06 Identities = 22/48 (45%), Positives = 37/48 (77%) Frame = +2
Query: 113 RARYEDAKFFYQSDVSKALVDFRPQLKGILFQEKLGTMLDKSIRVERM 256 +AR+EDA+F+Y+ D+ K LV+ KGI++ +KLG++ DKS+R+ R+ Sbjct: 320 KARFEDARFYYEEDLKKGLVNLLEATKGIIYHKKLGSLYDKSLRIIRI 367
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