BP914236 |
Clone id |
YMU001_000056_F03 |
Library |
YMU01 |
Length |
511 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000056_F03. |
Accession |
BP914236 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CACCCGAAAAATAGCGATCCTTGAACTGACCAGCGAAAGACAGGATGGACGGCGGCCTCC TCTTCTTCATCGTCACGCTTGGCTTTGCAGCTGTGGGCTTGCTCGCATCTCTGGGTGTTC CCATCGTTTATAACAAAGGCTCTTCTACCAATCGGTTGCATCTTTTGTTAGTGATTACGG CAGTTATCTGTGCATGGATGATGTGGGCTATTGTCTATATGGCGCAGTGGAAACCTCTTG TGAATCCTATATTGAGTGAATCTTAGCACTTCGGAACTTGGAAATGTCTCACTTTGATTT AAACAATTGTATCAAATTCAATAAGGCCTGGCCCTGGAGCATGTTTGTTTGCATTTTTGG TCAATATCTCTGCATTCTCAACTCGCCTTCGTAAAATCCTCCAATGTCATTGGCTATAAG AGCTAAACCAGATTATCCAGTGTCGTATCTTCTCAAAGAACCTTGTGGACGAGGGAAGGG TGCAATCTGAGATGGCATTGTAGCAAATTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q20591 |
Definition |
sp|Q20591|VA0E_CAEEL V-type proton ATPase subunit e OS=Caenorhabditis elegans |
Align length |
65 |
Score (bit) |
43.5 |
E-value |
0.0006 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8GUB2 |
Definition |
tr|Q8GUB2|Q8GUB2_MESCR Vacuolar ATPase subunit e-like OS=Mesembryanthemum crystallinum |
Align length |
67 |
Score (bit) |
92.8 |
E-value |
8.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914236|Adiantum capillus-veneris mRNA, clone: YMU001_000056_F03. (511 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8GUB2|Q8GUB2_MESCR Vacuolar ATPase subunit e-like OS=Mesembr... 93 8e-18 tr|A9PJE6|A9PJE6_POPJC Putative uncharacterized protein OS=Popul... 91 3e-17 tr|A9P9Z7|A9P9Z7_POPTR Putative uncharacterized protein OS=Popul... 91 3e-17 tr|A9TBU1|A9TBU1_PHYPA Predicted protein (Fragment) OS=Physcomit... 90 7e-17 tr|A9S0K0|A9S0K0_PHYPA Predicted protein (Fragment) OS=Physcomit... 90 7e-17 tr|Q9SZ13|Q9SZ13_ARATH Putative uncharacterized protein F10M23.5... 88 2e-16 tr|Q9FLN5|Q9FLN5_ARATH Arabidopsis thaliana genomic DNA, chromos... 88 2e-16 tr|Q53U40|Q53U40_SOLLC Similar to ATP synthase subunit H protein... 88 3e-16 tr|A9P8S8|A9P8S8_POPTR Putative uncharacterized protein OS=Popul... 87 4e-16 tr|B3FNQ0|B3FNQ0_HEVBR ATP synthase subunit H protein OS=Hevea b... 84 3e-15 tr|A9NK26|A9NK26_PICSI Putative uncharacterized protein OS=Picea... 84 3e-15 tr|A7P0I2|A7P0I2_VITVI Chromosome chr19 scaffold_4, whole genome... 84 3e-15 tr|A7QZW7|A7QZW7_VITVI Chromosome undetermined scaffold_292, who... 83 7e-15 tr|Q7XQZ9|Q7XQZ9_ORYSJ Os04g0660600 protein OS=Oryza sativa subs... 83 9e-15 tr|Q01JL5|Q01JL5_ORYSA H0112G12.5 protein OS=Oryza sativa GN=H01... 83 9e-15 tr|B8AW10|B8AW10_ORYSI Putative uncharacterized protein OS=Oryza... 83 9e-15 tr|B6SQV1|B6SQV1_MAIZE Putative uncharacterized protein OS=Zea m... 79 1e-13 tr|B6SGK0|B6SGK0_MAIZE Putative uncharacterized protein OS=Zea m... 79 2e-13 tr|B2KJ44|B2KJ44_WHEAT Plasma membrane H+-ATPase subunit H OS=Tr... 78 3e-13 tr|B6T2R2|B6T2R2_MAIZE Putative uncharacterized protein OS=Zea m... 77 5e-13 tr|B6TMK5|B6TMK5_MAIZE Putative uncharacterized protein OS=Zea m... 64 6e-09 tr|B4LBQ3|B4LBQ3_DROVI GJ12841 OS=Drosophila virilis GN=GJ12841 ... 51 3e-05 tr|A4S0A8|A4S0A8_OSTLU F-ATPase family transporter: protons (Vac... 51 4e-05 tr|B3M902|B3M902_DROAN GF20098 OS=Drosophila ananassae GN=GF2009... 51 4e-05 tr|B4J1H4|B4J1H4_DROGR GH15937 OS=Drosophila grimshawi GN=GH1593... 50 5e-05 tr|Q29D57|Q29D57_DROPS GA11753 OS=Drosophila pseudoobscura pseud... 50 6e-05 tr|B4H7X9|B4H7X9_DROPE GL12843 OS=Drosophila persimilis GN=GL128... 50 6e-05 tr|A7YXU9|A7YXU9_KARMI Hydrogen-transporting ATP synthase OS=Kar... 50 8e-05 tr|Q4DMI9|Q4DMI9_TRYCR Putative uncharacterized protein OS=Trypa... 49 1e-04 tr|B4NLZ1|B4NLZ1_DROWI GK19005 OS=Drosophila willistoni GN=GK190... 49 1e-04
>tr|Q8GUB2|Q8GUB2_MESCR Vacuolar ATPase subunit e-like OS=Mesembryanthemum crystallinum GN=vha-e PE=4 SV=1 Length = 70
Score = 92.8 bits (229), Expect = 8e-18 Identities = 42/67 (62%), Positives = 52/67 (77%) Frame = +3
Query: 63 FFIVTLGFAAVGLLASLGVPIVYNKGSSTNRLHLLLVITAVICAWMMWAIVYMAQWKPLV 242 F I TL F +G++ASL I +N+G STN LHL LV+TA +C WMMWAIVY+AQ KPL+ Sbjct: 3 FLITTLIFLVIGIIASLCTRICFNRGPSTNLLHLTLVLTATVCCWMMWAIVYLAQMKPLI 62
Query: 243 NPILSES 263 NPIL+ES Sbjct: 63 NPILNES 69
>tr|A9PJE6|A9PJE6_POPJC Putative uncharacterized protein OS=Populus jackii PE=4 SV=1 Length = 70
Score = 90.9 bits (224), Expect = 3e-17 Identities = 42/66 (63%), Positives = 51/66 (77%) Frame = +3
Query: 63 FFIVTLGFAAVGLLASLGVPIVYNKGSSTNRLHLLLVITAVICAWMMWAIVYMAQWKPLV 242 FF+ TL FA +G++ASL I N+G STN LHL LV+TA +C WMMWAIVY+AQ KPL+ Sbjct: 3 FFVTTLIFAVIGIIASLCTRICCNRGPSTNLLHLTLVLTATVCCWMMWAIVYLAQMKPLI 62
Query: 243 NPILSE 260 PILSE Sbjct: 63 VPILSE 68
>tr|A9P9Z7|A9P9Z7_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 70
Score = 90.9 bits (224), Expect = 3e-17 Identities = 42/66 (63%), Positives = 51/66 (77%) Frame = +3
Query: 63 FFIVTLGFAAVGLLASLGVPIVYNKGSSTNRLHLLLVITAVICAWMMWAIVYMAQWKPLV 242 FF+ TL FA +G++ASL I N+G STN LHL LV+TA +C WMMWAIVY+AQ KPL+ Sbjct: 3 FFVTTLIFAVIGIIASLCTRICCNRGPSTNLLHLTLVLTATVCCWMMWAIVYLAQMKPLI 62
Query: 243 NPILSE 260 PILSE Sbjct: 63 VPILSE 68
>tr|A9TBU1|A9TBU1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_19874 PE=4 SV=1 Length = 66
Score = 89.7 bits (221), Expect = 7e-17 Identities = 39/64 (60%), Positives = 52/64 (81%) Frame = +3
Query: 63 FFIVTLGFAAVGLLASLGVPIVYNKGSSTNRLHLLLVITAVICAWMMWAIVYMAQWKPLV 242 FF+++L F L+ SL V + YNKGSSTN L+++LV TAVIC W+MWAIV++AQWKPL+ Sbjct: 3 FFLISLYFLLTALVGSLCVKVCYNKGSSTNLLNVVLVNTAVICCWLMWAIVWLAQWKPLI 62
Query: 243 NPIL 254 NP+L Sbjct: 63 NPVL 66
>tr|A9S0K0|A9S0K0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_29621 PE=4 SV=1 Length = 66
Score = 89.7 bits (221), Expect = 7e-17 Identities = 39/64 (60%), Positives = 52/64 (81%) Frame = +3
Query: 63 FFIVTLGFAAVGLLASLGVPIVYNKGSSTNRLHLLLVITAVICAWMMWAIVYMAQWKPLV 242 FF+++L F GL+ SL V + YNKG STN L+++LV TAVIC W+MWAIV++AQWKPL+ Sbjct: 3 FFLISLYFLLSGLVGSLCVKVCYNKGPSTNMLNVVLVNTAVICCWLMWAIVWLAQWKPLI 62
Query: 243 NPIL 254 NP+L Sbjct: 63 NPVL 66
>tr|Q9SZ13|Q9SZ13_ARATH Putative uncharacterized protein F10M23.50 (Putative uncharacterized protein At4g26710) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=AT4g26710 PE=4 SV=1 Length = 70
Score = 88.2 bits (217), Expect = 2e-16 Identities = 41/68 (60%), Positives = 51/68 (75%) Frame = +3
Query: 57 LLFFIVTLGFAAVGLLASLGVPIVYNKGSSTNRLHLLLVITAVICAWMMWAIVYMAQWKP 236 + F + +L FA VG++AS+ I +NKG STN LHL LVITA +C WMMWAIVY+AQ P Sbjct: 1 MAFVVTSLIFAVVGIIASICTRICFNKGPSTNLLHLTLVITATVCCWMMWAIVYIAQMNP 60
Query: 237 LVNPILSE 260 L+ PILSE Sbjct: 61 LIVPILSE 68
>tr|Q9FLN5|Q9FLN5_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCO15 (AT5g55290/MCO15_24) OS=Arabidopsis thaliana GN=At5g55290 PE=4 SV=1 Length = 70
Score = 88.2 bits (217), Expect = 2e-16 Identities = 43/67 (64%), Positives = 50/67 (74%) Frame = +3
Query: 63 FFIVTLGFAAVGLLASLGVPIVYNKGSSTNRLHLLLVITAVICAWMMWAIVYMAQWKPLV 242 F I TL F VG++ASL V I N+G STN LHL LVITA +C WMMWAIVY+AQ PL+ Sbjct: 3 FLITTLIFVVVGIIASLCVRICCNRGPSTNLLHLTLVITATVCCWMMWAIVYIAQMNPLI 62
Query: 243 NPILSES 263 PILSE+ Sbjct: 63 VPILSET 69
>tr|Q53U40|Q53U40_SOLLC Similar to ATP synthase subunit H protein OS=Solanum lycopersicum PE=4 SV=1 Length = 70
Score = 87.8 bits (216), Expect = 3e-16 Identities = 40/66 (60%), Positives = 50/66 (75%) Frame = +3
Query: 63 FFIVTLGFAAVGLLASLGVPIVYNKGSSTNRLHLLLVITAVICAWMMWAIVYMAQWKPLV 242 F + TL F A+G++ASL I N+G STN LHL L+ITA +C WMMWAIVY+AQ KPL+ Sbjct: 3 FLVTTLIFVAIGVIASLCARICCNRGPSTNLLHLTLIITATVCCWMMWAIVYLAQLKPLI 62
Query: 243 NPILSE 260 P+LSE Sbjct: 63 VPVLSE 68
>tr|A9P8S8|A9P8S8_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 70
Score = 87.4 bits (215), Expect = 4e-16 Identities = 41/66 (62%), Positives = 49/66 (74%) Frame = +3
Query: 63 FFIVTLGFAAVGLLASLGVPIVYNKGSSTNRLHLLLVITAVICAWMMWAIVYMAQWKPLV 242 F + TL F VG++ASL I N+G STN LHL LV+TA +C WMMWAIVY+AQ KPL+ Sbjct: 3 FLVTTLIFVVVGIIASLCTRICCNRGPSTNLLHLTLVLTATVCCWMMWAIVYLAQMKPLI 62
Query: 243 NPILSE 260 PILSE Sbjct: 63 VPILSE 68
>tr|B3FNQ0|B3FNQ0_HEVBR ATP synthase subunit H protein OS=Hevea brasiliensis PE=4 SV=1 Length = 70
Score = 84.3 bits (207), Expect = 3e-15 Identities = 38/66 (57%), Positives = 48/66 (72%) Frame = +3
Query: 63 FFIVTLGFAAVGLLASLGVPIVYNKGSSTNRLHLLLVITAVICAWMMWAIVYMAQWKPLV 242 F ++TL F +G++ASL I N+G S N HL LVITA +C WMMWAIVY+AQ KPL+ Sbjct: 3 FLVITLIFVVIGIIASLCTRICCNRGPSANLFHLTLVITATVCCWMMWAIVYLAQMKPLI 62
Query: 243 NPILSE 260 PIL+E Sbjct: 63 VPILNE 68
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