BP914239 |
Clone id |
YMU001_000056_F06 |
Library |
YMU01 |
Length |
482 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000056_F06. |
Accession |
BP914239 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1391Contig1 |
Sequence |
GTTTGGACACAGATAATGCTGGACAGTGTTTCTGTCCTCCAGTTCATCTTTGATCTTCTT TTTTGCTCTATGTATTCTGTACCTTACAATGTCATACACCTGGGCATAATCCAAGCAACA ATACGAATGTGTGTGGAGTTTTTGCTTCTCCTCTCCCTCCCGTTGATTCATTGATCCATC GTTGGTTGCTGCAATTGCTGCATTATAAGCTTTTACTCCTTTGGCCGTCTCCCGACGATG TTCTCGAGCAATCAATGCTTCTTCCTCTAAAGTACGTAGAGTTCGCCTTAACTGTTTTGG ATGCAGCCGTAAATTCTTTGCCAAATCATCCTCCTTAACCCATTGTCGCCTGGTTAGCGC ATCAAGAACCACCACTGCAATGCCTCGATTATCAAATTTTTCTGTTTTGGGTTTATTTGC TCCCTTTGCATTCATGTCATCATCATAGAATGCTCTTGCCACTAGCTTCACCAGCCTGCG AA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q557M8 |
Definition |
sp|Q557M8|T2EA_DICDI General transcription factor IIE subunit 1 OS=Dictyostelium discoideum |
Align length |
156 |
Score (bit) |
56.2 |
E-value |
7.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S7R4 |
Definition |
tr|A9S7R4|A9S7R4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
160 |
Score (bit) |
266.0 |
E-value |
3.0e-70 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914239|Adiantum capillus-veneris mRNA, clone: YMU001_000056_F06. (482 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S7R4|A9S7R4_PHYPA Predicted protein OS=Physcomitrella paten... 266 3e-70 tr|B8LLR7|B8LLR7_PICSI Putative uncharacterized protein OS=Picea... 250 3e-65 tr|Q6ZB67|Q6ZB67_ORYSJ Os08g0343300 protein OS=Oryza sativa subs... 235 7e-61 tr|A2YU74|A2YU74_ORYSI Putative uncharacterized protein OS=Oryza... 235 7e-61 tr|B4FWI2|B4FWI2_MAIZE Putative uncharacterized protein OS=Zea m... 228 1e-58 tr|B4FSN5|B4FSN5_MAIZE Putative uncharacterized protein OS=Zea m... 227 2e-58 tr|Q93ZW3|Q93ZW3_ARATH Putative uncharacterized protein At1g0328... 214 2e-54 tr|Q9ZVS9|Q9ZVS9_ARATH F15K9.12 protein OS=Arabidopsis thaliana ... 206 4e-52 tr|B8BLY0|B8BLY0_ORYSI Putative uncharacterized protein OS=Oryza... 183 4e-45 tr|Q9SUP2|Q9SUP2_ARATH Putative uncharacterized protein AT4g2034... 178 1e-43 tr|Q6S7C4|Q6S7C4_ARATH TFIIE-alpha 2 (Fragment) OS=Arabidopsis t... 178 1e-43 tr|Q9SVG6|Q9SVG6_ARATH Putative uncharacterized protein AT4g2081... 160 3e-38 tr|B4FHH9|B4FHH9_MAIZE Putative uncharacterized protein OS=Zea m... 154 2e-36 tr|Q2RAU2|Q2RAU2_ORYSJ Os11g0137500 protein OS=Oryza sativa subs... 127 4e-28 tr|A3C8F6|A3C8F6_ORYSJ Putative uncharacterized protein OS=Oryza... 127 4e-28 tr|A2ZB75|A2ZB75_ORYSI Putative uncharacterized protein OS=Oryza... 127 4e-28 tr|A7R8E9|A7R8E9_VITVI Chromosome undetermined scaffold_2500, wh... 122 1e-26 tr|A5CAZ7|A5CAZ7_VITVI Putative uncharacterized protein OS=Vitis... 114 2e-24 tr|A3C3L3|A3C3L3_ORYSJ Putative uncharacterized protein OS=Oryza... 100 4e-20 tr|Q0IQ75|Q0IQ75_ORYSJ Os12g0140200 protein OS=Oryza sativa subs... 87 3e-16 tr|B8BLZ9|B8BLZ9_ORYSI Putative uncharacterized protein OS=Oryza... 87 3e-16 tr|Q01FP4|Q01FP4_OSTTA Transcription initiation factor IIE, alph... 86 7e-16 tr|A4RRX3|A4RRX3_OSTLU Predicted protein OS=Ostreococcus lucimar... 85 2e-15 tr|B8BIZ7|B8BIZ7_ORYSI Putative uncharacterized protein OS=Oryza... 75 1e-12 tr|B8LCE0|B8LCE0_THAPS Predicted protein OS=Thalassiosira pseudo... 65 2e-09 tr|Q2RAU3|Q2RAU3_ORYSJ Transcription initiation factor IIE, puta... 62 1e-08 tr|A3C8F5|A3C8F5_ORYSJ Putative uncharacterized protein OS=Oryza... 62 1e-08 tr|A7P2B5|A7P2B5_VITVI Chromosome chr1 scaffold_5, whole genome ... 59 2e-07 tr|Q6CMP5|Q6CMP5_KLULA KLLA0E18657p OS=Kluyveromyces lactis GN=K... 55 1e-06 tr|Q0P4H8|Q0P4H8_XENTR General transcription factor IIE, polypep... 54 4e-06
>tr|A9S7R4|A9S7R4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_105932 PE=4 SV=1 Length = 483
Score = 266 bits (681), Expect = 3e-70 Identities = 126/160 (78%), Positives = 143/160 (89%) Frame = -3
Query: 480 RRLVKLVARAFYDDDMNAKGANKPKTEKFDNRGIAVVVLDALTRRQWVKEDDLAKNLRLH 301 RRLVKLVARAFYD+++ AKG N+ K++K DN+GIAVVVLDALTRRQWVKE+DLAK LRLH Sbjct: 7 RRLVKLVARAFYDEEIPAKGPNRSKSDKSDNKGIAVVVLDALTRRQWVKEEDLAKKLRLH 66
Query: 300 PKQLRRTLRTLEEEALIAREHRRETAKGVKAYNAAIAATNDGSMNQREGEEKQKLHTHSY 121 PKQLRRTLR LEEE LI REHR+ET KG K YNAA+AA +DG+ ++EGEEK KLHTHSY Sbjct: 67 PKQLRRTLRVLEEEMLIIREHRKETVKGAKVYNAAVAAVSDGTTGEKEGEEKLKLHTHSY 126
Query: 120 CCLDYAQVYDIVRYRIHRAKKKIKDELEDRNTVQHYLCPN 1 CCLDYAQVYDIVRYRIHRA+KKIKDELEDRN +Q Y+CPN Sbjct: 127 CCLDYAQVYDIVRYRIHRARKKIKDELEDRNAIQEYVCPN 166
>tr|B8LLR7|B8LLR7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 480
Score = 250 bits (638), Expect = 3e-65 Identities = 120/160 (75%), Positives = 137/160 (85%) Frame = -3
Query: 480 RRLVKLVARAFYDDDMNAKGANKPKTEKFDNRGIAVVVLDALTRRQWVKEDDLAKNLRLH 301 +RLV+LVARAFYDD + N+PK+ + DNRG+AVVVLDALTRRQWVKEDDLAK+L+LH Sbjct: 7 KRLVRLVARAFYDDT-TTRAENQPKSGRSDNRGMAVVVLDALTRRQWVKEDDLAKDLKLH 65
Query: 300 PKQLRRTLRTLEEEALIAREHRRETAKGVKAYNAAIAATNDGSMNQREGEEKQKLHTHSY 121 KQLRRTLR EEE LI R+HRRETAKG K +NAAIAAT DG N +EGEEK KLHTHSY Sbjct: 66 SKQLRRTLRFFEEERLITRDHRRETAKGAKVFNAAIAATADGQQNGKEGEEKLKLHTHSY 125
Query: 120 CCLDYAQVYDIVRYRIHRAKKKIKDELEDRNTVQHYLCPN 1 CCLDYAQ YD+VRYRIHR KK++KDELEDRNT+Q Y+CPN Sbjct: 126 CCLDYAQTYDVVRYRIHRMKKRLKDELEDRNTLQEYICPN 165
>tr|Q6ZB67|Q6ZB67_ORYSJ Os08g0343300 protein OS=Oryza sativa subsp. japonica GN=OJ1119_B10.8 PE=2 SV=1 Length = 462
Score = 235 bits (600), Expect = 7e-61 Identities = 111/159 (69%), Positives = 133/159 (83%) Frame = -3
Query: 477 RLVKLVARAFYDDDMNAKGANKPKTEKFDNRGIAVVVLDALTRRQWVKEDDLAKNLRLHP 298 RLV+L ARAFYDD ++ KG N+PKT + DNRG+AVVVLDALTRRQWV+E+DLAK L+LH Sbjct: 9 RLVRLAARAFYDD-ISMKGDNQPKTSRGDNRGMAVVVLDALTRRQWVREEDLAKALKLHS 67
Query: 297 KQLRRTLRTLEEEALIAREHRRETAKGVKAYNAAIAATNDGSMNQREGEEKQKLHTHSYC 118 KQLRR LR EEE L+ R+HR+E+AKG K Y+AA AA DG +EGEEK K+HTHSYC Sbjct: 68 KQLRRILRFFEEEKLVTRDHRKESAKGAKIYSAAAAAAGDGQSITKEGEEKVKMHTHSYC 127
Query: 117 CLDYAQVYDIVRYRIHRAKKKIKDELEDRNTVQHYLCPN 1 CLDYAQ+ D+VRYRIHR KKK+KDEL+ RNT+QHY+CPN Sbjct: 128 CLDYAQICDVVRYRIHRMKKKLKDELDSRNTIQHYICPN 166
>tr|A2YU74|A2YU74_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28884 PE=4 SV=1 Length = 462
Score = 235 bits (600), Expect = 7e-61 Identities = 111/159 (69%), Positives = 133/159 (83%) Frame = -3
Query: 477 RLVKLVARAFYDDDMNAKGANKPKTEKFDNRGIAVVVLDALTRRQWVKEDDLAKNLRLHP 298 RLV+L ARAFYDD ++ KG N+PKT + DNRG+AVVVLDALTRRQWV+E+DLAK L+LH Sbjct: 9 RLVRLAARAFYDD-ISMKGDNQPKTSRGDNRGMAVVVLDALTRRQWVREEDLAKALKLHS 67
Query: 297 KQLRRTLRTLEEEALIAREHRRETAKGVKAYNAAIAATNDGSMNQREGEEKQKLHTHSYC 118 KQLRR LR EEE L+ R+HR+E+AKG K Y+AA AA DG +EGEEK K+HTHSYC Sbjct: 68 KQLRRILRFFEEEKLVTRDHRKESAKGAKIYSAAAAAAGDGQSITKEGEEKVKMHTHSYC 127
Query: 117 CLDYAQVYDIVRYRIHRAKKKIKDELEDRNTVQHYLCPN 1 CLDYAQ+ D+VRYRIHR KKK+KDEL+ RNT+QHY+CPN Sbjct: 128 CLDYAQICDVVRYRIHRMKKKLKDELDSRNTIQHYICPN 166
>tr|B4FWI2|B4FWI2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 460
Score = 228 bits (581), Expect = 1e-58 Identities = 110/159 (69%), Positives = 132/159 (83%) Frame = -3
Query: 477 RLVKLVARAFYDDDMNAKGANKPKTEKFDNRGIAVVVLDALTRRQWVKEDDLAKNLRLHP 298 RLVKL ARAFYDD ++ KG N+PKT + DNRG+AVVVLDALTRR WV+E+DLAK L+LH Sbjct: 9 RLVKLAARAFYDD-VSMKGDNQPKTSRGDNRGMAVVVLDALTRRPWVREEDLAKALKLHS 67
Query: 297 KQLRRTLRTLEEEALIAREHRRETAKGVKAYNAAIAATNDGSMNQREGEEKQKLHTHSYC 118 KQLRR LR EEE L+ R+HR+E+AK KA+NA AA NDG +EGEEK K+HTHSYC Sbjct: 68 KQLRRILRFFEEEKLVTRDHRKESAKNAKAHNA--AAANDGQTVAKEGEEKVKMHTHSYC 125
Query: 117 CLDYAQVYDIVRYRIHRAKKKIKDELEDRNTVQHYLCPN 1 CLDYAQ+ D+VRYRIHR KKK+KDEL+ RNT+QHY+CP+ Sbjct: 126 CLDYAQICDVVRYRIHRMKKKLKDELDSRNTIQHYICPS 164
>tr|B4FSN5|B4FSN5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 457
Score = 227 bits (579), Expect = 2e-58 Identities = 110/159 (69%), Positives = 132/159 (83%) Frame = -3
Query: 477 RLVKLVARAFYDDDMNAKGANKPKTEKFDNRGIAVVVLDALTRRQWVKEDDLAKNLRLHP 298 RLV+L ARAFYDD ++ KG N+PKT + DNRG+AVVVLDALTRR WV+E+DLAK L+LH Sbjct: 9 RLVRLAARAFYDD-VSMKGDNQPKTSRGDNRGMAVVVLDALTRRPWVREEDLAKALKLHS 67
Query: 297 KQLRRTLRTLEEEALIAREHRRETAKGVKAYNAAIAATNDGSMNQREGEEKQKLHTHSYC 118 KQLRR LR EEE L+ R+HR+E+AK KA+NA AA NDG +EGEEK KLHTHSYC Sbjct: 68 KQLRRILRFFEEEKLVTRDHRKESAKNAKAHNA--AAANDGQPIAKEGEEKVKLHTHSYC 125
Query: 117 CLDYAQVYDIVRYRIHRAKKKIKDELEDRNTVQHYLCPN 1 CLDYAQ+ D+VRYRIHR KKK+KDEL+ RNT+QHY+CP+ Sbjct: 126 CLDYAQICDVVRYRIHRMKKKLKDELDSRNTIQHYICPS 164
>tr|Q93ZW3|Q93ZW3_ARATH Putative uncharacterized protein At1g03280 (TFIIE-alpha 1) OS=Arabidopsis thaliana GN=At1g03280 PE=2 SV=1 Length = 479
Score = 214 bits (545), Expect = 2e-54 Identities = 104/159 (65%), Positives = 127/159 (79%) Frame = -3
Query: 477 RLVKLVARAFYDDDMNAKGANKPKTEKFDNRGIAVVVLDALTRRQWVKEDDLAKNLRLHP 298 +LV+LVARAFYDD K N+ K+ + DNRGIA VVLDAL RRQWV+E+DLAK+L+LH Sbjct: 18 KLVRLVARAFYDD-YTTKSDNQQKSARSDNRGIAAVVLDALARRQWVREEDLAKDLQLHA 76
Query: 297 KQLRRTLRTLEEEALIAREHRRETAKGVKAYNAAIAATNDGSMNQREGEEKQKLHTHSYC 118 KQLR+ +R EEE LI R+HR+ETAKG K Y+AA+AAT DG E+K KLHTHSYC Sbjct: 77 KQLRKIIRLFEEEKLIMRDHRKETAKGAKMYSAAVAATTDG-----RAEDKVKLHTHSYC 131
Query: 117 CLDYAQVYDIVRYRIHRAKKKIKDELEDRNTVQHYLCPN 1 CLDYAQ+ D+VR+R+HR KK++KDELED+NTVQ Y CPN Sbjct: 132 CLDYAQICDVVRFRLHRMKKRLKDELEDKNTVQEYGCPN 170
>tr|Q9ZVS9|Q9ZVS9_ARATH F15K9.12 protein OS=Arabidopsis thaliana GN=F15K9.12 PE=4 SV=1 Length = 506
Score = 206 bits (525), Expect = 4e-52 Identities = 104/168 (61%), Positives = 127/168 (75%), Gaps = 9/168 (5%) Frame = -3
Query: 477 RLVKLVARAFYDDDMNAKGANKPKTEKFDNRGIAVVVLDALTRRQWVKEDDLAKNLRLHP 298 +LV+LVARAFYDD K N+ K+ + DNRGIA VVLDAL RRQWV+E+DLAK+L+LH Sbjct: 18 KLVRLVARAFYDD-YTTKSDNQQKSARSDNRGIAAVVLDALARRQWVREEDLAKDLQLHA 76
Query: 297 KQLRRTLRTLEEEALIAREHRRETAKGVKAYNAAIAATNDGSMNQREGEEKQKLHTHSYC 118 KQLR+ +R EEE LI R+HR+ETAKG K Y+AA+AAT DG E+K KLHTHSYC Sbjct: 77 KQLRKIIRLFEEEKLIMRDHRKETAKGAKMYSAAVAATTDG-----RAEDKVKLHTHSYC 131
Query: 117 CLDYA---------QVYDIVRYRIHRAKKKIKDELEDRNTVQHYLCPN 1 CLDYA Q+ D+VR+R+HR KK++KDELED+NTVQ Y CPN Sbjct: 132 CLDYAQARFISSFLQICDVVRFRLHRMKKRLKDELEDKNTVQEYGCPN 179
>tr|B8BLY0|B8BLY0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37389 PE=4 SV=1 Length = 458
Score = 183 bits (464), Expect = 4e-45 Identities = 94/159 (59%), Positives = 117/159 (73%), Gaps = 1/159 (0%) Frame = -3
Query: 474 LVKLVARAFYDDDMNAKGANKPKTEKFDNRGIAVVVLDALTRR-QWVKEDDLAKNLRLHP 298 +V++VARAFYDD A PK+ + DN G+AVV LDALTRR QWV+E+DLAK L++ Sbjct: 1 MVRMVARAFYDD---VSLARDPKSARGDNCGLAVVALDALTRRRQWVREEDLAKALKISS 57
Query: 297 KQLRRTLRTLEEEALIAREHRRETAKGVKAYNAAIAATNDGSMNQREGEEKQKLHTHSYC 118 KQLRR L+ EEE L+ R HR+E+ KGV N +D + GE K K+HTHSYC Sbjct: 58 KQLRRILQFFEEEKLVRRCHRKESPKGVNISNNVSGTASDVHPFTKGGE-KAKMHTHSYC 116
Query: 117 CLDYAQVYDIVRYRIHRAKKKIKDELEDRNTVQHYLCPN 1 CLDYAQVYD+VR+RIHR +KK+KDEL+DR+TVQHY CPN Sbjct: 117 CLDYAQVYDVVRHRIHRMRKKLKDELDDRDTVQHYACPN 155
>tr|Q9SUP2|Q9SUP2_ARATH Putative uncharacterized protein AT4g20340 OS=Arabidopsis thaliana GN=F9F13.4 PE=4 SV=1 Length = 527
Score = 178 bits (452), Expect = 1e-43 Identities = 88/159 (55%), Positives = 115/159 (72%) Frame = -3
Query: 477 RLVKLVARAFYDDDMNAKGANKPKTEKFDNRGIAVVVLDALTRRQWVKEDDLAKNLRLHP 298 +LV+L+ R FYD+ + N+ K+ K + +G AV+VLDALTRRQWV+E+DLAK ++ + Sbjct: 19 KLVRLLVRIFYDN-YTPESDNQQKSVK-NVKGSAVIVLDALTRRQWVREEDLAKEVKRNA 76
Query: 297 KQLRRTLRTLEEEALIAREHRRETAKGVKAYNAAIAATNDGSMNQREGEEKQKLHTHSYC 118 K+LR+ +R EE+ + R HR+ETAK K Y+ A+ T DG E+ K HTHSYC Sbjct: 77 KELRKLIRHFEEQKFVMRYHRKETAKRAKMYSYAVGGTTDG-----RAEDNVKFHTHSYC 131
Query: 117 CLDYAQVYDIVRYRIHRAKKKIKDELEDRNTVQHYLCPN 1 CLDYAQ+YDIVRY++HR KKK KDELEDRNTVQ Y CPN Sbjct: 132 CLDYAQIYDIVRYKLHRLKKKFKDELEDRNTVQEYGCPN 170
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