BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914240|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_F07.
         (587 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9HE05|UFD2_SCHPO Ubiquitin conjugation factor E4 OS=Schizosa...    32   3.1  

>sp|Q9HE05|UFD2_SCHPO Ubiquitin conjugation factor E4
           OS=Schizosaccharomyces pombe GN=ufd2 PE=2 SV=1
          Length = 1010

 Score = 31.6 bits (70), Expect = 3.1
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -3

Query: 480 PLLYAMDVRLSLIAAGTEAYESLHHGFYMCEAYELLWRIP 361
           P L A  + +      T+ Y+  +  FY+CE +  +W+ P
Sbjct: 670 PALMAFYIEIESTGQSTQFYDKFNIRFYICEVFRTIWKQP 709

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914240|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_F07.
         (587 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3PEC6|B3PEC6_CELJU Putative membrane protein OS=Cellvibrio j...    37   1.1  
tr|A9USY5|A9USY5_MONBE Predicted protein (Fragment) OS=Monosiga ...    33   9.1  

>tr|B3PEC6|B3PEC6_CELJU Putative membrane protein OS=Cellvibrio
           japonicus (strain Ueda107) GN=CJA_3228 PE=4 SV=1
          Length = 191

 Score = 36.6 bits (83), Expect = 1.1
 Identities = 21/63 (33%), Positives = 32/63 (50%)
 Frame = -3

Query: 336 WVPGLWRIQHPIGLYIFFLEKVVRSILSLNVWSLFLEGSNPRVEISSACTIVLF*VTLFS 157
           W+   W IQHP+GL    +  ++R++L L+VW LF +     V  S      L    + +
Sbjct: 117 WIVYSWIIQHPLGL----IHALLRTVLVLSVWLLFPDSRLTAVSFSVVLVYGLSIWQMLN 172

Query: 156 RTI 148
           RTI
Sbjct: 173 RTI 175


>tr|A9USY5|A9USY5_MONBE Predicted protein (Fragment) OS=Monosiga
           brevicollis GN=2316 PE=4 SV=1
          Length = 241

 Score = 33.5 bits (75), Expect = 9.1
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +1

Query: 28  NYDCICLQNNAITYKACTKCSHESTLAPKPLNHAQHQALKNCP 156
           N D  C    A    ACT C+     AP+ LN A  Q + NCP
Sbjct: 50  NCDSTCATCEAAGSNACTSCT-----APRTLNAATRQCISNCP 87