BP914242
Clone id YMU001_000056_F10
Library
Length 284
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000056_F10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GTGAGAAAAACCCATCAGAAAGATCAGATACAATGGGAAGAACACAGGAGTGTGCCCTAA
TTTAAAGGCGGTAAAAGAGCTGTAGGATATCCCAGATACAATGGGAAGAACACAGCAGTA
TGCCGTAATGTAAAGGCGCTAAAAGAGCTGTAAGATATCCGAGGATATGCCCCCAACATG
GGGCACAATGTAAGGATTGCCTAAGTGAAATGTTGAATGAAGGAAATGGATCCGCATCAT
GCTGATGGAACATGCGAAATTTGCATTGACGCCACCAAGACTAT
■■Homology search results ■■ -
sp_hit_id Q49421
Definition sp|Q49421|ESL3_MYCGE Putative esterase/lipase 3 OS=Mycoplasma genitalium
Align length 53
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914242|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_F10.
(284 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q49421|ESL3_MYCGE Putative esterase/lipase 3 OS=Mycoplasma ge... 30 3.7
sp|Q71ZA3|FPG_LISMF Formamidopyrimidine-DNA glycosylase OS=Liste... 29 6.3
sp|Q9FMG1|MCA3_ARATH Metacaspase-3 OS=Arabidopsis thaliana GN=AM... 29 8.3

>sp|Q49421|ESL3_MYCGE Putative esterase/lipase 3 OS=Mycoplasma
genitalium GN=MG344 PE=3 SV=1
Length = 273

Score = 30.0 bits (66), Expect = 3.7
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -2

Query: 259 FRMFHQHDADPFPSFNISLRQSLHCAPCW-GH-ILGYLTALLAPLHYGILLCS 107
F +FH + F SF +L + AP W GH + G+ L+P+HYG LL +
Sbjct: 36 FSVFHSY----FQSFYKTLTDYDYYAPLWPGHNVNGFDYKELSPIHYGELLAA 84


>sp|Q71ZA3|FPG_LISMF Formamidopyrimidine-DNA glycosylase OS=Listeria
monocytogenes serotype 4b (strain F2365) GN=mutM PE=3
SV=3
Length = 273

Score = 29.3 bits (64), Expect = 6.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2

Query: 8 KPIRKIRYNGKNTGVCPN 61
KPI KI+ NG+ T CPN
Sbjct: 253 KPIEKIKLNGRGTHFCPN 270


>sp|Q9FMG1|MCA3_ARATH Metacaspase-3 OS=Arabidopsis thaliana GN=AMC3
PE=2 SV=1
Length = 362

Score = 28.9 bits (63), Expect = 8.3
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 16/68 (23%)
Frame = +1

Query: 31 QWEEHRSVP*FKG-------------GKRAVGY-PRYNGKNTAVCRN--VKALKEL*DIR 162
+WE+HRSV +KG + GY P + GKNT +KA+K
Sbjct: 251 EWEDHRSVRAYKGTDGGAAFCFSACDDDESSGYTPVFTGKNTGAMTYSFIKAVK----TA 306

Query: 163 GYAPNMGH 186
G AP GH
Sbjct: 307 GPAPTYGH 314


tr_hit_id Q85KH1
Definition tr|Q85KH1|Q85KH1_POLHU NADH dehydrogenase 5 (Fragment) OS=Polistes humilis
Align length 87
Score (bit) 35.8
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914242|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_F10.
(284 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q85KH1|Q85KH1_POLHU NADH dehydrogenase 5 (Fragment) OS=Polist... 36 1.1
tr|B4XEN8|B4XEN8_9HYME NADH dehydrogenase subunit 5 OS=Polistes ... 36 1.1
tr|B1SWN8|B1SWN8_9BACI Putative uncharacterized protein OS=Geoba... 33 5.5
tr|A9KY77|A9KY77_SHEB9 Multi-sensor signal transduction histidin... 33 7.2
tr|A6WM72|A6WM72_SHEB8 Multi-sensor signal transduction histidin... 33 7.2
tr|A3D3G9|A3D3G9_SHEB5 Multi-sensor signal transduction histidin... 33 7.2
tr|B8EAH5|B8EAH5_9GAMM PAS/PAC sensor signal transduction histid... 33 7.2

>tr|Q85KH1|Q85KH1_POLHU NADH dehydrogenase 5 (Fragment) OS=Polistes
humilis PE=4 SV=1
Length = 201

Score = 35.8 bits (81), Expect = 1.1
Identities = 26/87 (29%), Positives = 46/87 (52%)
Frame = -3

Query: 270 VNANFACSISMMRIHFLHSTFHLGNPYIVPHVGGISSDILQLF*RLYITAYCCVLPIVSG 91
+N ++ SISMM ++FL F Y + ++ + IL +F +L I C+L I+ G
Sbjct: 51 LNEDYLMSISMMFLYFLSMMF----GYFMLNLYSLELVILSIFHKLLIMK-ICLLGILVG 105

Query: 90 ISYSSFTAFKLGHTPVFFPLYLIFLMG 10
+ +S+F F L + +YL+ + G
Sbjct: 106 LFFSNFNFFNLFK---YLKIYLLSMWG 129


>tr|B4XEN8|B4XEN8_9HYME NADH dehydrogenase subunit 5 OS=Polistes sp.
MD1 GN=ND5 PE=4 SV=1
Length = 554

Score = 35.8 bits (81), Expect = 1.1
Identities = 26/87 (29%), Positives = 46/87 (52%)
Frame = -3

Query: 270 VNANFACSISMMRIHFLHSTFHLGNPYIVPHVGGISSDILQLF*RLYITAYCCVLPIVSG 91
+N ++ SISMM ++FL F Y + ++ + IL +F +L I C+L I+ G
Sbjct: 404 LNEDYLMSISMMFLYFLSMMF----GYFMLNLYSLELVILSIFHKLLIMK-ICLLGILVG 458

Query: 90 ISYSSFTAFKLGHTPVFFPLYLIFLMG 10
+ +S+F F L + +YL+ + G
Sbjct: 459 LFFSNFNFFNLFK---YLKIYLLSMWG 482


>tr|B1SWN8|B1SWN8_9BACI Putative uncharacterized protein
OS=Geobacillus sp. WCH70 GN=GWCH70DRAFT_3331 PE=4 SV=1
Length = 146

Score = 33.5 bits (75), Expect = 5.5
Identities = 16/66 (24%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -3

Query: 213 TFHLGNPYIVPHVGGISS---DILQLF*RLYITAYCCVLPIVSGISYSSFTAFKLGHTPV 43
++ +G+ +I+P G +++ D+ F +++T+Y + P V+ + S + A +G
Sbjct: 43 SYLIGDLFILPRFGNLAAAIADVPLAFLLIWLTSYALIEPTVNMVYASFYCALAIGAIEA 102

Query: 42 FFPLYL 25
FF L++
Sbjct: 103 FFHLFM 108


>tr|A9KY77|A9KY77_SHEB9 Multi-sensor signal transduction histidine
kinase OS=Shewanella baltica (strain OS195)
GN=Sbal195_1812 PE=4 SV=1
Length = 878

Score = 33.1 bits (74), Expect = 7.2
Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Frame = -2

Query: 247 HQHDADPFPSFNISLRQSLHCAPCWGHILGYLTALLAPLHYGILL-CSSHCI-----WDI 86
HQ+D P LH A H+LG L LA + I+L C + I W
Sbjct: 722 HQNDIRP-----------LHLAQFMRHLLGLLKVQLAKANVEIVLNCEENIIIDGPAWQY 770

Query: 85 LQLFYRL 65
LQLFYRL
Sbjct: 771 LQLFYRL 777


>tr|A6WM72|A6WM72_SHEB8 Multi-sensor signal transduction histidine
kinase OS=Shewanella baltica (strain OS185)
GN=Shew185_1768 PE=4 SV=1
Length = 878

Score = 33.1 bits (74), Expect = 7.2
Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Frame = -2

Query: 247 HQHDADPFPSFNISLRQSLHCAPCWGHILGYLTALLAPLHYGILL-CSSHCI-----WDI 86
HQ+D P LH A H+LG L LA + I+L C + I W
Sbjct: 722 HQNDIRP-----------LHLAQFMRHLLGLLKVQLAKANVEIVLDCEENIIIDGPAWQY 770

Query: 85 LQLFYRL 65
LQLFYRL
Sbjct: 771 LQLFYRL 777


>tr|A3D3G9|A3D3G9_SHEB5 Multi-sensor signal transduction histidine
kinase OS=Shewanella baltica (strain OS155 / ATCC
BAA-1091) GN=Sbal_1775 PE=4 SV=1
Length = 878

Score = 33.1 bits (74), Expect = 7.2
Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Frame = -2

Query: 247 HQHDADPFPSFNISLRQSLHCAPCWGHILGYLTALLAPLHYGILL-CSSHCI-----WDI 86
HQ+D P LH A H+LG L LA + I+L C + I W
Sbjct: 722 HQNDIRP-----------LHLAQFMRHLLGLLKVQLAKANVEIVLDCEENIIIDGPAWQY 770

Query: 85 LQLFYRL 65
LQLFYRL
Sbjct: 771 LQLFYRL 777


>tr|B8EAH5|B8EAH5_9GAMM PAS/PAC sensor signal transduction histidine
kinase OS=Shewanella baltica OS223 GN=Sbal223_2510 PE=4
SV=1
Length = 876

Score = 33.1 bits (74), Expect = 7.2
Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Frame = -2

Query: 247 HQHDADPFPSFNISLRQSLHCAPCWGHILGYLTALLAPLHYGILL-CSSHCI-----WDI 86
HQ+D P LH A H+LG L LA + I+L C + I W
Sbjct: 720 HQNDIRP-----------LHLAQFMRHLLGLLKVQLAKANVEIVLDCEENIIIDGPAWQY 768

Query: 85 LQLFYRL 65
LQLFYRL
Sbjct: 769 LQLFYRL 775