BP914243 |
Clone id |
YMU001_000056_F11 |
Library |
YMU01 |
Length |
574 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000056_F11. |
Accession |
BP914243 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AGTTAAAGGAGCACTTGCTATGGTATCACAGTGAAAAGTTGGCCGTTACTTTTGGTCTTA TGAAAACACTGCCAGGAACTTCTCTACGGATTATTAAGAACCTTCGTGTCTGCCAAGACT GTCATTCTGCATTCAAGATCATCTCAAAGGTGGCCTGTCGTGAGATTACTTTGAGAGATG CCAACAGATTTCATGTTTTCTCAAATGGCTTGTGTTCTTGTAAAGATTATTGGTGATACT TGTGTAGTCATTTTTGAAGTAAAAGCAGGATGCAGAATGCTGTGGCTCAAAGCAGAGTGA ATGAGTAACAGCCAGAGGTACTCTATGTAGATGTTTTACTGGACGTTTGAAATGAAATCA ACAGGTGCGTCCGGATTGTCTATTCGTTCAATGCCAATGGCTTCGCAGGGTCTGTAGTAC CATAATTAACTAAATCAAAGTTGTAGACCCTTATGACAGGTGAATCATGTGGGTGGTGTC CTTTAGGACCCCATGAAAGGGCATTTCTGTGTTTGATGATGATGGATTGATCATGAAGTC ATTCGGCTTGTGCTATTCCAAAGAAAGTTCATGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SMZ2 |
Definition |
sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana |
Align length |
76 |
Score (bit) |
115.0 |
E-value |
2.0e-25 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5AN69 |
Definition |
tr|A5AN69|A5AN69_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
77 |
Score (bit) |
114.0 |
E-value |
5.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914243|Adiantum capillus-veneris mRNA, clone: YMU001_000056_F11. (574 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5AN69|A5AN69_VITVI Putative uncharacterized protein OS=Vitis... 114 5e-24 tr|A7R402|A7R402_VITVI Chromosome undetermined scaffold_596, who... 113 9e-24 tr|A7PL36|A7PL36_VITVI Chromosome chr7 scaffold_20, whole genome... 113 9e-24 tr|A2Z9T6|A2Z9T6_ORYSI Putative uncharacterized protein OS=Oryza... 113 9e-24 tr|A7R6X2|A7R6X2_VITVI Chromosome undetermined scaffold_1472, wh... 112 1e-23 tr|Q9FRJ8|Q9FRJ8_ORYSA Putative uncharacterized protein OSJNBb00... 112 2e-23 tr|Q336W7|Q336W7_ORYSJ Os10g0540100 protein OS=Oryza sativa subs... 112 2e-23 tr|A7PRQ2|A7PRQ2_VITVI Chromosome chr14 scaffold_27, whole genom... 111 2e-23 tr|A5BN40|A5BN40_VITVI Putative uncharacterized protein OS=Vitis... 111 2e-23 tr|A7PA17|A7PA17_VITVI Chromosome chr14 scaffold_9, whole genome... 111 3e-23 tr|Q8H8N2|Q8H8N2_ORYSJ Os03g0775400 protein OS=Oryza sativa subs... 110 4e-23 tr|A7QUQ9|A7QUQ9_VITVI Chromosome chr1 scaffold_180, whole genom... 110 4e-23 tr|A7PTK3|A7PTK3_VITVI Chromosome undetermined scaffold_30, whol... 110 4e-23 tr|A5AMS4|A5AMS4_VITVI Putative uncharacterized protein OS=Vitis... 110 4e-23 tr|A3AN62|A3AN62_ORYSJ Putative uncharacterized protein OS=Oryza... 110 4e-23 tr|A2XMF9|A2XMF9_ORYSI Putative uncharacterized protein OS=Oryza... 110 4e-23 tr|Q5SMW7|Q5SMW7_ORYSJ Os06g0185800 protein OS=Oryza sativa subs... 110 6e-23 tr|B8B3Q8|B8B3Q8_ORYSI Putative uncharacterized protein OS=Oryza... 110 6e-23 tr|A7Q0E2|A7Q0E2_VITVI Chromosome chr7 scaffold_42, whole genome... 110 6e-23 tr|A7PXP2|A7PXP2_VITVI Chromosome chr12 scaffold_36, whole genom... 110 6e-23 tr|A7P4V6|A7P4V6_VITVI Chromosome chr4 scaffold_6, whole genome ... 110 6e-23 tr|A5AZR2|A5AZR2_VITVI Putative uncharacterized protein OS=Vitis... 110 6e-23 tr|A9RJW2|A9RJW2_PHYPA Predicted protein OS=Physcomitrella paten... 110 7e-23 tr|A7R380|A7R380_VITVI Chromosome undetermined scaffold_490, who... 110 7e-23 tr|A7QEC5|A7QEC5_VITVI Chromosome chr1 scaffold_84, whole genome... 110 7e-23 tr|A7P9A6|A7P9A6_VITVI Chromosome chr3 scaffold_8, whole genome ... 109 9e-23 tr|Q5W965|Q5W965_PHYPA PPR868-14 OS=Physcomitrella patens PE=2 SV=1 109 1e-22 tr|A9SDQ1|A9SDQ1_PHYPA Predicted protein OS=Physcomitrella paten... 109 1e-22 tr|A7PNH6|A7PNH6_VITVI Chromosome chr1 scaffold_22, whole genome... 109 1e-22 tr|A7PN01|A7PN01_VITVI Chromosome chr14 scaffold_21, whole genom... 109 1e-22
>tr|A5AN69|A5AN69_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027622 PE=4 SV=1 Length = 697
Score = 114 bits (284), Expect = 5e-24 Identities = 47/77 (61%), Positives = 63/77 (81%) Frame = +3
Query: 3 LKEHLLWYHSEKLAVTFGLMKTLPGTSLRIIKNLRVCQDCHSAFKIISKVACREITLRDA 182 +K+ +L++HSEK+A+ FGLM+T PGT +RI KNLR C DCHSA K +SKV R + ++DA Sbjct: 621 MKKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVFGRVLVIKDA 680
Query: 183 NRFHVFSNGLCSCKDYW 233 NRFHVF +G+CSC+DYW Sbjct: 681 NRFHVFQDGVCSCRDYW 697
>tr|A7R402|A7R402_VITVI Chromosome undetermined scaffold_596, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00004068001 PE=4 SV=1 Length = 587
Score = 113 bits (282), Expect = 9e-24 Identities = 50/76 (65%), Positives = 61/76 (80%) Frame = +3
Query: 6 KEHLLWYHSEKLAVTFGLMKTLPGTSLRIIKNLRVCQDCHSAFKIISKVACREITLRDAN 185 +E+ L YHSEKLA+ FGLMKT G ++RI+KNLR+C+DCHSA K IS +A REI +RD Sbjct: 512 REYALRYHSEKLAIAFGLMKTSHGMTIRIVKNLRMCEDCHSAIKFISNIANREIIVRDKL 571
Query: 186 RFHVFSNGLCSCKDYW 233 RFH F NGLCSC+DYW Sbjct: 572 RFHHFKNGLCSCQDYW 587
>tr|A7PL36|A7PL36_VITVI Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019419001 PE=4 SV=1 Length = 785
Score = 113 bits (282), Expect = 9e-24 Identities = 52/77 (67%), Positives = 61/77 (79%) Frame = +3
Query: 3 LKEHLLWYHSEKLAVTFGLMKTLPGTSLRIIKNLRVCQDCHSAFKIISKVACREITLRDA 182 LKE +L +HSEKLA+ FGL+ T T+LRI+KNLRVC DCHSA K ISK+ REI +RDA Sbjct: 709 LKEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDA 768
Query: 183 NRFHVFSNGLCSCKDYW 233 RFH F NGLCSC+DYW Sbjct: 769 TRFHHFKNGLCSCRDYW 785
>tr|A2Z9T6|A2Z9T6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34497 PE=4 SV=1 Length = 681
Score = 113 bits (282), Expect = 9e-24 Identities = 52/77 (67%), Positives = 60/77 (77%) Frame = +3
Query: 3 LKEHLLWYHSEKLAVTFGLMKTLPGTSLRIIKNLRVCQDCHSAFKIISKVACREITLRDA 182 +KE L YHSEKLA+ FGL+ T PGT L IIKNLRVC DCH A K ISK+A REI +RDA Sbjct: 605 VKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDA 664
Query: 183 NRFHVFSNGLCSCKDYW 233 RFH F +G+CSC+DYW Sbjct: 665 KRFHHFKDGVCSCRDYW 681
>tr|A7R6X2|A7R6X2_VITVI Chromosome undetermined scaffold_1472, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00008457001 PE=4 SV=1 Length = 587
Score = 112 bits (280), Expect = 1e-23 Identities = 50/76 (65%), Positives = 61/76 (80%) Frame = +3
Query: 6 KEHLLWYHSEKLAVTFGLMKTLPGTSLRIIKNLRVCQDCHSAFKIISKVACREITLRDAN 185 +E+ L YHSEKLA+ FGLMKT G ++RI+KNLR+C+DCHSA K IS +A REI +RD Sbjct: 512 REYALRYHSEKLAIAFGLMKTSHGMTIRIVKNLRMCEDCHSAIKFISYIANREIIVRDKL 571
Query: 186 RFHVFSNGLCSCKDYW 233 RFH F NGLCSC+DYW Sbjct: 572 RFHHFKNGLCSCQDYW 587
>tr|Q9FRJ8|Q9FRJ8_ORYSA Putative uncharacterized protein OSJNBb0064P21.15 OS=Oryza sativa GN=OSJNBb0064P21.15 PE=4 SV=1 Length = 787
Score = 112 bits (279), Expect = 2e-23 Identities = 51/77 (66%), Positives = 60/77 (77%) Frame = +3
Query: 3 LKEHLLWYHSEKLAVTFGLMKTLPGTSLRIIKNLRVCQDCHSAFKIISKVACREITLRDA 182 +KE L YHSE+LA+ FGL+ T PGT L IIKNLRVC DCH A K ISK+A REI +RDA Sbjct: 605 VKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDA 664
Query: 183 NRFHVFSNGLCSCKDYW 233 RFH F +G+CSC+DYW Sbjct: 665 KRFHHFKDGVCSCRDYW 681
>tr|Q336W7|Q336W7_ORYSJ Os10g0540100 protein OS=Oryza sativa subsp. japonica GN=Os10g0540100 PE=2 SV=1 Length = 681
Score = 112 bits (279), Expect = 2e-23 Identities = 51/77 (66%), Positives = 60/77 (77%) Frame = +3
Query: 3 LKEHLLWYHSEKLAVTFGLMKTLPGTSLRIIKNLRVCQDCHSAFKIISKVACREITLRDA 182 +KE L YHSE+LA+ FGL+ T PGT L IIKNLRVC DCH A K ISK+A REI +RDA Sbjct: 605 VKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDA 664
Query: 183 NRFHVFSNGLCSCKDYW 233 RFH F +G+CSC+DYW Sbjct: 665 KRFHHFKDGVCSCRDYW 681
>tr|A7PRQ2|A7PRQ2_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022590001 PE=4 SV=1 Length = 672
Score = 111 bits (278), Expect = 2e-23 Identities = 49/76 (64%), Positives = 61/76 (80%) Frame = +3
Query: 6 KEHLLWYHSEKLAVTFGLMKTLPGTSLRIIKNLRVCQDCHSAFKIISKVACREITLRDAN 185 KE +W HSEKLA+ FGL+ T PGT++RI+KNLRVC+DCHSA K+IS+V REI +RD Sbjct: 597 KETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRI 656
Query: 186 RFHVFSNGLCSCKDYW 233 R+H F NG CSCKD+W Sbjct: 657 RYHHFRNGACSCKDFW 672
>tr|A5BN40|A5BN40_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030555 PE=4 SV=1 Length = 673
Score = 111 bits (278), Expect = 2e-23 Identities = 49/76 (64%), Positives = 61/76 (80%) Frame = +3
Query: 6 KEHLLWYHSEKLAVTFGLMKTLPGTSLRIIKNLRVCQDCHSAFKIISKVACREITLRDAN 185 KE +W HSEKLA+ FGL+ T PGT++RI+KNLRVC+DCHSA K+IS+V REI +RD Sbjct: 598 KETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRI 657
Query: 186 RFHVFSNGLCSCKDYW 233 R+H F NG CSCKD+W Sbjct: 658 RYHHFRNGACSCKDFW 673
>tr|A7PA17|A7PA17_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037937001 PE=4 SV=1 Length = 581
Score = 111 bits (277), Expect = 3e-23 Identities = 50/76 (65%), Positives = 60/76 (78%) Frame = +3
Query: 6 KEHLLWYHSEKLAVTFGLMKTLPGTSLRIIKNLRVCQDCHSAFKIISKVACREITLRDAN 185 KE +L HSEKLAV FG+M T+PGT++ IIKNLRVC DCH+A K ISK+ REI +RD+ Sbjct: 506 KEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSK 565
Query: 186 RFHVFSNGLCSCKDYW 233 RFH F +GLCSC DYW Sbjct: 566 RFHHFRDGLCSCGDYW 581
|