| BP914253 |
| Clone id |
YMU001_000056_G09 |
| Library |
YMU01 |
| Length |
518 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000056_G09. |
| Accession |
BP914253 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL4225Contig1 |
| Sequence |
AGCCAAGAACGATGTTGGCATAACTGATGAAGATTTGGAGTGGATTATGGGAAGAACAGC
AACGGAGCTTTTCAAGGGTGGATGGGTGAAGGGACAGTAGCTGAATGTTTTCTCACCAAC
ACTCCATTTCAACGGACACTCTCATCAAATTTGTTAAGGTTCACTTTACAATTGCCCCCA
GAATAATGCATGTCAGCAGGAAGAGGATGTTCAACCATCGAATTTTCAGTCCATTCCTAT
TCGAGCCAAAGACTAGATCCAAACGCCATGCAGTAATGAGTGCTTTACCAAAAACTTCTT
GAAGGCTCACTTTACAACTGTCTTCGGCAGCAAGAAGAGGATGTTCAACAATCAAATTTA
ATCTCCATTACCATTCGAGCCGAAGACTAAATCCAAACACCATGCTGCTATGATTGAAAG
GAAACAGGCCATCCCTTCTTGTCAATTGTTGATAGACAAGATTTCAGTACTTACCACTAA
ATGCGATAATTAAGAAGTGCAAGTTCTTTGTTTCAAAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
O00507 |
| Definition |
sp|O00507|USP9Y_HUMAN Probable ubiquitin carboxyl-terminal hydrolase FAF-Y OS=Homo sapiens |
| Align length |
71 |
| Score (bit) |
30.0 |
| E-value |
6.8 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A7QUU5 |
| Definition |
tr|A7QUU5|A7QUU5_VITVI Chromosome chr1 scaffold_180, whole genome shotgun sequence OS=Vitis vinifera |
| Align length |
27 |
| Score (bit) |
39.3 |
| E-value |
0.12 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914253|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_G09.
(518 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A7QUU5|A7QUU5_VITVI Chromosome chr1 scaffold_180, whole genom... 39 0.12
tr|Q0JDM7|Q0JDM7_ORYSJ Os04g0391900 protein OS=Oryza sativa subs... 39 0.15
tr|Q01LC2|Q01LC2_ORYSA OSIGBa0145N07.5 protein OS=Oryza sativa G... 39 0.15
tr|B8AT89|B8AT89_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.15
tr|B7ES75|B7ES75_ORYSJ cDNA clone:J033064N18, full insert sequen... 39 0.15
tr|A3ATB0|A3ATB0_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.15
tr|A9PGT3|A9PGT3_POPTR Putative uncharacterized protein OS=Popul... 38 0.35
tr|B4FLE1|B4FLE1_MAIZE Putative uncharacterized protein OS=Zea m... 37 0.45
tr|B0XJJ2|B0XJJ2_CULQU Testis-specific serine/threonine-protein ... 33 6.5
tr|B6FPT3|B6FPT3_9CLOT Putative uncharacterized protein (Fragmen... 33 8.5
>tr|A7QUU5|A7QUU5_VITVI Chromosome chr1 scaffold_180, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00006982001
PE=4 SV=1
Length = 340
Score = 39.3 bits (90), Expect = 0.12
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +2
Query: 8 NDVGITDEDLEWIMGRTATELFKGGWV 88
N++ ++ +LEWIMGRT ELF+G W+
Sbjct: 312 NEIPLSSSELEWIMGRTVMELFQGQWL 338
>tr|Q0JDM7|Q0JDM7_ORYSJ Os04g0391900 protein OS=Oryza sativa subsp.
japonica GN=Os04g0391900 PE=4 SV=1
Length = 357
Score = 38.9 bits (89), Expect = 0.15
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +2
Query: 14 VGITDEDLEWIMGRTATELFKGGWV 88
+ ++ DLEWI+G+T T+LF+G WV
Sbjct: 331 IPVSSSDLEWILGKTVTQLFQGAWV 355
>tr|Q01LC2|Q01LC2_ORYSA OSIGBa0145N07.5 protein OS=Oryza sativa
GN=OSIGBa0145N07.5 PE=4 SV=1
Length = 304
Score = 38.9 bits (89), Expect = 0.15
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +2
Query: 14 VGITDEDLEWIMGRTATELFKGGWV 88
+ ++ DLEWI+G+T T+LF+G WV
Sbjct: 278 IPVSSSDLEWILGKTVTQLFQGAWV 302
>tr|B8AT89|B8AT89_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_15682 PE=4 SV=1
Length = 460
Score = 38.9 bits (89), Expect = 0.15
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +2
Query: 14 VGITDEDLEWIMGRTATELFKGGWV 88
+ ++ DLEWI+G+T T+LF+G WV
Sbjct: 434 IPVSSSDLEWILGKTVTQLFQGAWV 458
>tr|B7ES75|B7ES75_ORYSJ cDNA clone:J033064N18, full insert sequence
OS=Oryza sativa subsp. japonica PE=2 SV=1
Length = 247
Score = 38.9 bits (89), Expect = 0.15
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +2
Query: 14 VGITDEDLEWIMGRTATELFKGGWV 88
+ ++ DLEWI+G+T T+LF+G WV
Sbjct: 221 IPVSSSDLEWILGKTVTQLFQGAWV 245
>tr|A3ATB0|A3ATB0_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_014032 PE=4 SV=1
Length = 333
Score = 38.9 bits (89), Expect = 0.15
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +2
Query: 14 VGITDEDLEWIMGRTATELFKGGWV 88
+ ++ DLEWI+G+T T+LF+G WV
Sbjct: 307 IPVSSSDLEWILGKTVTQLFQGAWV 331
>tr|A9PGT3|A9PGT3_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 300
Score = 37.7 bits (86), Expect = 0.35
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 8 NDVGITDEDLEWIMGRTATELFKGGWV 88
N V ++ +LEWIMG+T +LF+G WV
Sbjct: 273 NQVPLSSSELEWIMGKTVMQLFQGQWV 299
>tr|B4FLE1|B4FLE1_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 294
Score = 37.4 bits (85), Expect = 0.45
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +2
Query: 14 VGITDEDLEWIMGRTATELFKGGWV 88
+ ++ DLEWI+G+T ++LF+G WV
Sbjct: 268 IPVSQSDLEWILGKTVSQLFQGAWV 292
>tr|B0XJJ2|B0XJJ2_CULQU Testis-specific serine/threonine-protein
kinase 6 OS=Culex quinquefasciatus GN=CpipJ_CPIJ019614
PE=3 SV=1
Length = 590
Score = 33.5 bits (75), Expect = 6.5
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -2
Query: 130 EMECW*ENIQLLSLHPSTLEKLRCCSSHNPLQIFISYA 17
++ C E ++++ HP+ + + CCS+ PL + I YA
Sbjct: 365 DLVCELEIMKMIGKHPNVISLVGCCSNKGPLYVIIEYA 402
>tr|B6FPT3|B6FPT3_9CLOT Putative uncharacterized protein (Fragment)
OS=Clostridium nexile DSM 1787 GN=CLONEX_02152 PE=4 SV=1
Length = 397
Score = 33.1 bits (74), Expect = 8.5
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = -2
Query: 283 ALITAWRLDLVFGSNRNGLKIRWLNILFLLTCIILGAIVK*TLTNL-MRVSVEME 122
AL+++ LD+ GS + WL +LFL+ I+L A++ +NL +RV+ ++E
Sbjct: 41 ALVSSCLLDIATGSREGSV---WLQVLFLVMLILLQAVLNIASSNLRIRVTTKIE 92
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