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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914266
Clone id YMU001_000057_A01
Library
Length 575
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000057_A01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GGAATAAATTTTGCCTGTATGTCCTTGCAAGGTCCTGCAGCAAGTGAAGTCTTGCGAACG
CAATTGGATGGTGCTATATCCATTCTCCCGAGCATATGTAGCAACATTAGTGTCTACAAG
CTCCATGCGCTTCTGCTGCACTCTCTCTCTCCTAATTTGGACTTCCTGAGTTGCCTGCTA
TGAGCTTTTCTATAAGCTCTGCCATGGACATCTTTGTATTTGTGTGCGCGTCAACACTCA
ATCCCGTGTAGTTGTCTGGGTCCCCACTTGTTTACTATGTCCCTTACGTACTTGGATCGA
AAGCCCAGACTCTAGAACCCACCGAGCGTTGCATTTTAGCATTACGCTAATCCTTCTGCA
TCCTCTAAATGCTGCGTATCCATCTCCGCAAACAAAACCTGCCGTCACAAAAGCATTTGC
CCATTTCGAGTATGTTGCAGAAACTGCATCTCCTCCTTCAAATGTGCACAATCTCCTTGC
ACCTTCAAAGCCCCTGATCTGATAGTCCTGTCCTGGTTGAGCCGACTCTCTCTCTCAGAG
TCAAAAACCTTCAACGCCTGCTTCTAAGTACTCTC
■■Homology search results ■■ -
sp_hit_id P49177
Definition sp|P49177|GBB_ARATH Guanine nucleotide-binding protein subunit beta OS=Arabidopsis thaliana
Align length 42
Score (bit) 53.1
E-value 1.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914266|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_A01.
         (575 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P49177|GBB_ARATH Guanine nucleotide-binding protein subunit b...    53   1e-06
sp|P93563|GBB_SOLTU Guanine nucleotide-binding protein subunit b...    52   2e-06
sp|P93339|GBB_NICPL Guanine nucleotide-binding protein subunit b...    52   2e-06
sp|Q40507|GBB3_TOBAC Guanine nucleotide-binding protein subunit ...    52   2e-06
sp|P93397|GBB1_TOBAC Guanine nucleotide-binding protein subunit ...    52   2e-06
sp|P93398|GBB2_TOBAC Guanine nucleotide-binding protein subunit ...    51   4e-06
sp|Q40687|GBB_ORYSJ Guanine nucleotide-binding protein subunit b...    50   6e-06
sp|P49178|GBB_MAIZE Guanine nucleotide-binding protein subunit b...    50   6e-06
sp|Q9BYQ9|KRA48_HUMAN Keratin-associated protein 4-8 OS=Homo sap...    33   0.78 
sp|Q6L8G4|KR511_HUMAN Keratin-associated protein 5-11 OS=Homo sa...    33   1.0  
sp|Q5R6Y9|MS3L1_PONAB Male-specific lethal 3 homolog OS=Pongo ab...    32   1.7  
sp|Q8N5Y2|MS3L1_HUMAN Male-specific lethal 3 homolog OS=Homo sap...    32   1.7  
sp|Q9BYR2|KRA45_HUMAN Keratin-associated protein 4-5 OS=Homo sap...    32   1.7  
sp|Q9BQ66|KR412_HUMAN Keratin-associated protein 4-12 OS=Homo sa...    32   1.7  
sp|Q8IZF5|GP113_HUMAN Probable G-protein coupled receptor 113 OS...    32   1.7  
sp|Q9BYR0|KRA47_HUMAN Keratin-associated protein 4-7 OS=Homo sap...    32   3.0  
sp|Q6L8H1|KRA54_HUMAN Keratin-associated protein 5-4 OS=Homo sap...    31   3.9  
sp|Q9BYQ5|KRA46_HUMAN Keratin-associated protein 4-6 OS=Homo sap...    31   3.9  
sp|Q9BYQ6|KR411_HUMAN Keratin-associated protein 4-11 OS=Homo sa...    31   3.9  
sp|Q3TVA9|CC136_MOUSE Coiled-coil domain-containing protein 136 ...    31   3.9  
sp|Q8K1S6|SPIR2_MOUSE Protein spire homolog 2 OS=Mus musculus GN...    30   6.6  
sp|Q9WVG9|MS3L1_MOUSE Male-specific lethal 3 homolog OS=Mus musc...    30   6.6  
sp|Q6L8G5|KR510_HUMAN Keratin-associated protein 5-10 OS=Homo sa...    30   6.6  
sp|Q8YTC2|Y2800_ANASP Uncharacterized WD repeat-containing prote...    27   6.8  
sp|Q9D5Z7|KRA52_MOUSE Keratin-associated protein 5-2 OS=Mus musc...    30   8.6  
sp|Q9BYQ8|KRA49_HUMAN Keratin-associated protein 4-9 (Fragment) ...    30   8.6  

>sp|P49177|GBB_ARATH Guanine nucleotide-binding protein subunit beta
           OS=Arabidopsis thaliana GN=GB1 PE=1 SV=1
          Length = 377

 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 21/42 (50%), Positives = 30/42 (71%)
 Frame = -3

Query: 126 MELVDTNVATYARENGYSTIQLRSQDFTCCRTLQGHTGKIYS 1
           ++L+DT+VA Y+   G + +   + D  CCRTLQGHTGK+YS
Sbjct: 29  LQLLDTDVARYSAAQGRTRVSFGATDLVCCRTLQGHTGKVYS 70


>sp|P93563|GBB_SOLTU Guanine nucleotide-binding protein subunit beta
           OS=Solanum tuberosum GN=GB1 PE=2 SV=1
          Length = 377

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 21/42 (50%), Positives = 29/42 (69%)
 Frame = -3

Query: 126 MELVDTNVATYARENGYSTIQLRSQDFTCCRTLQGHTGKIYS 1
           ++L+DT+V+ YA+  G S +     D  CCR LQGHTGK+YS
Sbjct: 29  LQLLDTDVSGYAKRQGKSPVTFGPTDLVCCRILQGHTGKVYS 70


>sp|P93339|GBB_NICPL Guanine nucleotide-binding protein subunit beta
           OS=Nicotiana plumbaginifolia PE=2 SV=1
          Length = 377

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 21/42 (50%), Positives = 29/42 (69%)
 Frame = -3

Query: 126 MELVDTNVATYARENGYSTIQLRSQDFTCCRTLQGHTGKIYS 1
           ++L+DT+V+ YAR  G + +     D  CCR LQGHTGK+YS
Sbjct: 29  LQLLDTDVSGYARSQGKTPVTFGPTDLVCCRILQGHTGKVYS 70


>sp|Q40507|GBB3_TOBAC Guanine nucleotide-binding protein subunit
           beta OS=Nicotiana tabacum PE=2 SV=1
          Length = 375

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 21/42 (50%), Positives = 29/42 (69%)
 Frame = -3

Query: 126 MELVDTNVATYARENGYSTIQLRSQDFTCCRTLQGHTGKIYS 1
           ++L+DT+V+ YAR  G + +     D  CCR LQGHTGK+YS
Sbjct: 29  LQLLDTDVSGYARSQGKTPVTFGPTDLVCCRILQGHTGKVYS 70


>sp|P93397|GBB1_TOBAC Guanine nucleotide-binding protein subunit
           beta-1 OS=Nicotiana tabacum PE=1 SV=1
          Length = 377

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 21/42 (50%), Positives = 29/42 (69%)
 Frame = -3

Query: 126 MELVDTNVATYARENGYSTIQLRSQDFTCCRTLQGHTGKIYS 1
           ++L+DT+V+ YAR  G + +     D  CCR LQGHTGK+YS
Sbjct: 29  LQLLDTDVSGYARSQGKTPVTFGPTDLVCCRILQGHTGKVYS 70


>sp|P93398|GBB2_TOBAC Guanine nucleotide-binding protein subunit
           beta-2 OS=Nicotiana tabacum PE=2 SV=1
          Length = 377

 Score = 51.2 bits (121), Expect = 4e-06
 Identities = 21/42 (50%), Positives = 29/42 (69%)
 Frame = -3

Query: 126 MELVDTNVATYARENGYSTIQLRSQDFTCCRTLQGHTGKIYS 1
           ++L+DT+V+ YAR  G + +     D  CCR LQGHTGK+YS
Sbjct: 29  LQLLDTDVSGYARSQGKTPVIFGPTDLVCCRILQGHTGKVYS 70


>sp|Q40687|GBB_ORYSJ Guanine nucleotide-binding protein subunit beta
           OS=Oryza sativa subsp. japonica GN=Os03g0669200 PE=1
           SV=1
          Length = 380

 Score = 50.4 bits (119), Expect = 6e-06
 Identities = 20/40 (50%), Positives = 27/40 (67%)
 Frame = -3

Query: 120 LVDTNVATYARENGYSTIQLRSQDFTCCRTLQGHTGKIYS 1
           L+DT+V  Y+R  G + +     D  CCRTLQGH+GK+YS
Sbjct: 32  LLDTDVERYSRTQGRTPVSFNPTDLVCCRTLQGHSGKVYS 71


>sp|P49178|GBB_MAIZE Guanine nucleotide-binding protein subunit beta
           OS=Zea mays GN=GB1 PE=2 SV=1
          Length = 380

 Score = 50.4 bits (119), Expect = 6e-06
 Identities = 20/40 (50%), Positives = 27/40 (67%)
 Frame = -3

Query: 120 LVDTNVATYARENGYSTIQLRSQDFTCCRTLQGHTGKIYS 1
           L+DT+VA Y++  G   +     D  CCRTLQGH+GK+YS
Sbjct: 32  LLDTDVARYSKSQGRVPVSFNPTDLVCCRTLQGHSGKVYS 71


>sp|Q9BYQ9|KRA48_HUMAN Keratin-associated protein 4-8 OS=Homo
           sapiens GN=KRTAP4-8 PE=2 SV=2
          Length = 195

 Score = 33.5 bits (75), Expect = 0.78
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
 Frame = +1

Query: 367 KCCVSISANKTCRHKSICPFRVCCRN--CISSF---KCAQSPC 480
           +CC S+    TC H S C    CCR   C+SS    +C QS C
Sbjct: 88  QCCQSVCCQPTCCHPSCC-ISSCCRPSCCVSSCCKPQCCQSVC 129



 Score = 30.8 bits (68), Expect = 5.1
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +1

Query: 367 KCCVSISANKTCRHKSICPFRVCCRNCISSFKCAQSPC 480
           +CC S+    TC H S C    CCR       C +  C
Sbjct: 123 QCCQSVCCQPTCCHPS-CSISSCCRPSCCESSCCRPCC 159


>sp|Q6L8G4|KR511_HUMAN Keratin-associated protein 5-11 OS=Homo
           sapiens GN=KRTAP5-11 PE=2 SV=1
          Length = 156

 Score = 33.1 bits (74), Expect = 1.0
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +1

Query: 346 ANPSASSKCCVSISANKTCRHKSICPFRVCCRNCISSFKCAQSPC 480
           ++    S CC S S +K C  +S C    CC+ C     C QS C
Sbjct: 93  SSSGCGSFCCQS-SCSKPCCCQSSCCQSSCCKPCCCQSSCCQSSC 136
tr_hit_id B8LPY7
Definition tr|B8LPY7|B8LPY7_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 41
Score (bit) 58.2
E-value 3.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914266|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_A01.
         (575 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LPY7|B8LPY7_PICSI Putative uncharacterized protein OS=Picea...    58   3e-07
tr|Q8LJQ7|Q8LJQ7_PEA G protein beta subunit OS=Pisum sativum PE=...    55   2e-06
tr|A7P922|A7P922_VITVI Chromosome chr3 scaffold_8, whole genome ...    55   4e-06
tr|A5AL96|A5AL96_VITVI Putative uncharacterized protein OS=Vitis...    55   4e-06
tr|Q9XFK0|Q9XFK0_PEA G protein beta subunit OS=Pisum sativum PE=...    54   6e-06
tr|Q9SW94|Q9SW94_PEA G protein beta subunit OS=Pisum sativum PE=...    54   6e-06
tr|Q5PNT1|Q5PNT1_ARATH At4g34460 OS=Arabidopsis thaliana PE=2 SV=1     53   1e-05
tr|Q3E9R4|Q3E9R4_ARATH Uncharacterized protein At4g34460.3 OS=Ar...    53   1e-05
tr|Q9FV61|Q9FV61_TOBAC Heterotrimeric GTP-binding protein subuni...    52   2e-05
tr|Q945H7|Q945H7_SOLTU G protein beta subunit 2 OS=Solanum tuber...    50   7e-05
tr|Q10FF8|Q10FF8_ORYSJ cDNA, clone: J090061B07, full insert sequ...    50   7e-05
tr|B8AP31|B8AP31_ORYSI Putative uncharacterized protein OS=Oryza...    50   7e-05
tr|B4FVH4|B4FVH4_MAIZE Putative uncharacterized protein OS=Zea m...    50   7e-05
tr|O64944|O64944_AVEFA G protein beta subunit OS=Avena fatua GN=...    50   9e-05
tr|Q8LNY6|Q8LNY6_WHEAT G protein beta subunit OS=Triticum aestiv...    50   1e-04
tr|Q0DPR1|Q0DPR1_ORYSJ Os03g0669200 protein OS=Oryza sativa subs...    45   0.003
tr|A8MR96|A8MR96_ARATH Uncharacterized protein At4g34460.4 OS=Ar...    44   0.008
tr|A2A4M0|A2A4M0_MOUSE Novel member of the keratin associated pr...    36   1.7  
tr|Q2GSB3|Q2GSB3_CHAGB Putative uncharacterized protein OS=Chaet...    36   1.7  
tr|B6PLF5|B6PLF5_BRAFL Putative uncharacterized protein (Fragmen...    35   2.9  
tr|B4NHI6|B4NHI6_DROWI GK13666 OS=Drosophila willistoni GN=GK136...    35   2.9  
tr|B1AQA8|B1AQA8_MOUSE Novel member of the keratin associated pr...    35   3.8  
tr|A4U2M7|A4U2M7_9PROT ATP-dependent protease LA OS=Magnetospiri...    34   5.0  
tr|Q9LUI2|Q9LUI2_ARATH Centromere protein OS=Arabidopsis thalian...    34   5.0  
tr|B1AQB0|B1AQB0_MOUSE Novel member of the keratin associated pr...    34   6.5  
tr|A8MSH3|A8MSH3_HUMAN Putative uncharacterized protein ENSP0000...    33   8.6  

>tr|B8LPY7|B8LPY7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 377

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 25/41 (60%), Positives = 30/41 (73%)
 Frame = -3

Query: 123 ELVDTNVATYARENGYSTIQLRSQDFTCCRTLQGHTGKIYS 1
           +L+DT+VATYA  NG + I     D  CCRTLQGHTGK+YS
Sbjct: 30  QLLDTDVATYASNNGRTPISFSFTDLVCCRTLQGHTGKVYS 70


>tr|Q8LJQ7|Q8LJQ7_PEA G protein beta subunit OS=Pisum sativum PE=4
           SV=1
          Length = 377

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 23/42 (54%), Positives = 30/42 (71%)
 Frame = -3

Query: 126 MELVDTNVATYARENGYSTIQLRSQDFTCCRTLQGHTGKIYS 1
           + L+DT++A YAR  G + + L   D  CCRTLQGHTGK+YS
Sbjct: 29  LSLLDTDIAGYARSQGRAPVTLGPTDILCCRTLQGHTGKVYS 70


>tr|A7P922|A7P922_VITVI Chromosome chr3 scaffold_8, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00036395001
           PE=4 SV=1
          Length = 388

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 24/40 (60%), Positives = 28/40 (70%)
 Frame = -3

Query: 120 LVDTNVATYARENGYSTIQLRSQDFTCCRTLQGHTGKIYS 1
           L+DT+VA YAR  G S +     D  CCRTLQGHTGK+YS
Sbjct: 31  LLDTDVAGYARAQGKSPVTFGPTDLVCCRTLQGHTGKVYS 70


>tr|A5AL96|A5AL96_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_027042 PE=4 SV=1
          Length = 366

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 24/40 (60%), Positives = 28/40 (70%)
 Frame = -3

Query: 120 LVDTNVATYARENGYSTIQLRSQDFTCCRTLQGHTGKIYS 1
           L+DT+VA YAR  G S +     D  CCRTLQGHTGK+YS
Sbjct: 31  LLDTDVAGYARAQGKSPVTFGPTDLVCCRTLQGHTGKVYS 70


>tr|Q9XFK0|Q9XFK0_PEA G protein beta subunit OS=Pisum sativum PE=2
           SV=1
          Length = 377

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 22/42 (52%), Positives = 29/42 (69%)
 Frame = -3

Query: 126 MELVDTNVATYARENGYSTIQLRSQDFTCCRTLQGHTGKIYS 1
           + L+DT++A YAR  G + +     D  CCRTLQGHTGK+YS
Sbjct: 29  LSLLDTDIAGYARSQGRAPVTFGPTDILCCRTLQGHTGKVYS 70


>tr|Q9SW94|Q9SW94_PEA G protein beta subunit OS=Pisum sativum PE=2
           SV=1
          Length = 377

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 22/42 (52%), Positives = 29/42 (69%)
 Frame = -3

Query: 126 MELVDTNVATYARENGYSTIQLRSQDFTCCRTLQGHTGKIYS 1
           + L+DT++A YAR  G + +     D  CCRTLQGHTGK+YS
Sbjct: 29  LSLLDTDIAGYARSQGRAPVTFGPTDILCCRTLQGHTGKVYS 70


>tr|Q5PNT1|Q5PNT1_ARATH At4g34460 OS=Arabidopsis thaliana PE=2 SV=1
          Length = 375

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 21/42 (50%), Positives = 30/42 (71%)
 Frame = -3

Query: 126 MELVDTNVATYARENGYSTIQLRSQDFTCCRTLQGHTGKIYS 1
           ++L+DT+VA Y+   G + +   + D  CCRTLQGHTGK+YS
Sbjct: 29  LQLLDTDVARYSAAQGRTRVSFGATDLVCCRTLQGHTGKVYS 70


>tr|Q3E9R4|Q3E9R4_ARATH Uncharacterized protein At4g34460.3
           OS=Arabidopsis thaliana GN=At4g34460 PE=4 SV=1
          Length = 347

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 21/42 (50%), Positives = 30/42 (71%)
 Frame = -3

Query: 126 MELVDTNVATYARENGYSTIQLRSQDFTCCRTLQGHTGKIYS 1
           ++L+DT+VA Y+   G + +   + D  CCRTLQGHTGK+YS
Sbjct: 29  LQLLDTDVARYSAAQGRTRVSFGATDLVCCRTLQGHTGKVYS 70


>tr|Q9FV61|Q9FV61_TOBAC Heterotrimeric GTP-binding protein subunit
           beta 1 OS=Nicotiana tabacum PE=2 SV=1
          Length = 377

 Score = 52.0 bits (123), Expect = 2e-05
 Identities = 21/42 (50%), Positives = 29/42 (69%)
 Frame = -3

Query: 126 MELVDTNVATYARENGYSTIQLRSQDFTCCRTLQGHTGKIYS 1
           ++L+DT+V+ YAR  G + +     D  CCR LQGHTGK+YS
Sbjct: 29  LQLLDTDVSGYARSQGKTPVTFGPTDLVCCRILQGHTGKVYS 70


>tr|Q945H7|Q945H7_SOLTU G protein beta subunit 2 OS=Solanum
           tuberosum GN=GB2 PE=2 SV=1
          Length = 377

 Score = 50.4 bits (119), Expect = 7e-05
 Identities = 20/42 (47%), Positives = 29/42 (69%)
 Frame = -3

Query: 126 MELVDTNVATYARENGYSTIQLRSQDFTCCRTLQGHTGKIYS 1
           ++L+DT+V+ YA+  G + +     D  CCR LQGHTGK+YS
Sbjct: 29  LQLLDTDVSGYAKTQGKTPVTFGPTDLVCCRILQGHTGKVYS 70