BP914274 |
Clone id |
YMU001_000057_A11 |
Library |
YMU01 |
Length |
598 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000057_A11. |
Accession |
BP914274 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2493Contig1 |
Sequence |
TTTTTTTTTTTTTTTTTTTTCTTCAAATGTGCCCTTTGTAAAAGGGACAATTTAAAACCA GTCCTCTGTTTGAAAGCAGGCAATCACAGCCAGCTAATACAGAAGGGTACTCTATAAAGA ACACTCGGACAATGCCATTTGATGTACTGCTTCAGCAATTATTTATGAACGACAAGGTTT TAATACCTCAATCGTTTCTTATGCCCCGAACGAATGCCCTGCTATTTACAAAGCTTGAAC AATCCCAATTTACAACCTATATAGCCATTAGCTACATGTGTGTGTAGTTCAACAATGAGG GCATACAAAAAGGAACCTTTAAAGCACGCCGATAAGGAACTTCACATTTTCAAGGTGTCC CACTGAAAACCATTTTCTGCAGAGGGCATGCAAAAAGGAAGCCTTAATGCACGCTGATCA CAAACTTCACGCTTTCATGGTGTCTCGCTGAAAACCATTTCCTGGTCACAGACTGGACAA TATTGGCTTCGTTCCATCCACTCGTAAATGCATCCAAGGTGGAAATGATGCCCACAATGA GTACTTATCTTGGGATTCTCCTTGGTGTAGCCATCAAGACAAGTCGGGCATACATCCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8LE94 |
Definition |
sp|Q8LE94|RING3_ARATH E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana |
Align length |
53 |
Score (bit) |
95.9 |
E-value |
1.0e-19 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LQG6 |
Definition |
tr|B8LQG6|B8LQG6_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
53 |
Score (bit) |
108.0 |
E-value |
2.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914274|Adiantum capillus-veneris mRNA, clone: YMU001_000057_A11. (575 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LQG6|B8LQG6_PICSI Putative uncharacterized protein OS=Picea... 108 2e-22 tr|A7QT95|A7QT95_VITVI Chromosome chr1 scaffold_166, whole genom... 100 4e-20 tr|B7FJT3|B7FJT3_MEDTR Putative uncharacterized protein OS=Medic... 99 2e-19 tr|Q1KUU2|Q1KUU2_9ROSI Putative uncharacterized protein OS=Cleom... 97 5e-19 tr|A7PAE6|A7PAE6_VITVI Chromosome chr14 scaffold_9, whole genome... 96 1e-18 tr|B7FJQ8|B7FJQ8_MEDTR Putative uncharacterized protein OS=Medic... 96 1e-18 tr|B4FYL2|B4FYL2_MAIZE Protein binding protein OS=Zea mays PE=2 ... 95 3e-18 tr|Q1KUY5|Q1KUY5_9ROSI Putative uncharacterized protein OS=Cleom... 94 5e-18 tr|Q2R0W9|Q2R0W9_ORYSJ Os11g0629300 protein OS=Oryza sativa subs... 94 7e-18 tr|Q1KUQ0|Q1KUQ0_9ROSI Putative uncharacterized protein OS=Cleom... 93 9e-18 tr|Q9LFU7|Q9LFU7_ARATH Putative uncharacterized protein F14F8_17... 93 1e-17 tr|Q9FMB2|Q9FMB2_ARATH Genomic DNA, chromosome 5, TAC clone:K15E... 92 2e-17 tr|Q94C65|Q94C65_ARATH Putative uncharacterized protein At5g3889... 92 2e-17 tr|Q5JK23|Q5JK23_ORYSJ cDNA clone:J033050H01, full insert sequen... 92 2e-17 tr|B8A8H1|B8A8H1_ORYSI Putative uncharacterized protein OS=Oryza... 92 2e-17 tr|A9U313|A9U313_PHYPA Predicted protein (Fragment) OS=Physcomit... 92 2e-17 tr|B6TB98|B6TB98_MAIZE Protein binding protein OS=Zea mays PE=2 ... 91 3e-17 tr|B4FWC3|B4FWC3_MAIZE Putative uncharacterized protein OS=Zea m... 91 3e-17 tr|B4F997|B4F997_MAIZE Putative uncharacterized protein OS=Zea m... 91 3e-17 tr|A5APU7|A5APU7_VITVI Putative uncharacterized protein OS=Vitis... 91 5e-17 tr|A7P2C2|A7P2C2_VITVI Chromosome chr1 scaffold_5, whole genome ... 90 8e-17 tr|B1Q490|B1Q490_CAPCH Putative zinc finger family protein OS=Ca... 87 5e-16 tr|A7PZN0|A7PZN0_VITVI Chromosome chr15 scaffold_40, whole genom... 86 1e-15 tr|A5BLE4|A5BLE4_VITVI Putative uncharacterized protein OS=Vitis... 86 1e-15 tr|A3CD20|A3CD20_ORYSJ Putative uncharacterized protein OS=Oryza... 86 1e-15 tr|A2ZG51|A2ZG51_ORYSI Putative uncharacterized protein OS=Oryza... 86 1e-15 tr|B6T6I9|B6T6I9_MAIZE Protein binding protein OS=Zea mays PE=2 ... 82 3e-14 tr|A7QNL6|A7QNL6_VITVI Chromosome chr2 scaffold_132, whole genom... 82 3e-14 tr|A8JET6|A8JET6_CHLRE Predicted protein (Fragment) OS=Chlamydom... 81 4e-14 tr|Q94AB7|Q94AB7_ARATH AT5g41350/MYC6_6 OS=Arabidopsis thaliana ... 81 5e-14
>tr|B8LQG6|B8LQG6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 233
Score = 108 bits (271), Expect = 2e-22 Identities = 43/53 (81%), Positives = 48/53 (90%) Frame = -3
Query: 573 DVCPTCLDGYTKENPKISTHCGHHFHLGCIYEWMERSQYCPVCDQEMVFSETP 415 D+CPTCLDGY ENPKI T CGHHFHLGCIYEWMERS+ CPVCD+EMVF+E+P Sbjct: 181 DICPTCLDGYNTENPKIPTQCGHHFHLGCIYEWMERSKNCPVCDKEMVFTESP 233
>tr|A7QT95|A7QT95_VITVI Chromosome chr1 scaffold_166, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006215001 PE=4 SV=1 Length = 232
Score = 100 bits (250), Expect = 4e-20 Identities = 40/53 (75%), Positives = 45/53 (84%) Frame = -3
Query: 573 DVCPTCLDGYTKENPKISTHCGHHFHLGCIYEWMERSQYCPVCDQEMVFSETP 415 DVCPTCLD YT ENPKI+T C HHFHLGCIYEWMERS+ CP+C +EM F E+P Sbjct: 180 DVCPTCLDEYTPENPKITTQCSHHFHLGCIYEWMERSESCPICGKEMEFCESP 232
>tr|B7FJT3|B7FJT3_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 229
Score = 98.6 bits (244), Expect = 2e-19 Identities = 40/52 (76%), Positives = 43/52 (82%) Frame = -3
Query: 573 DVCPTCLDGYTKENPKISTHCGHHFHLGCIYEWMERSQYCPVCDQEMVFSET 418 D+CPTCL+ YTKENPKI T C HHFHLGCIYEWMERS CPVC +EM F ET Sbjct: 175 DICPTCLEEYTKENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKEMDFDET 226
>tr|Q1KUU2|Q1KUU2_9ROSI Putative uncharacterized protein OS=Cleome spinosa PE=4 SV=1 Length = 229
Score = 97.4 bits (241), Expect = 5e-19 Identities = 40/53 (75%), Positives = 44/53 (83%) Frame = -3
Query: 573 DVCPTCLDGYTKENPKISTHCGHHFHLGCIYEWMERSQYCPVCDQEMVFSETP 415 DVCPTCL+ YT ENPKI T C HHFHLGCIYEWMERS+ CPVC + M F+ETP Sbjct: 177 DVCPTCLEEYTLENPKIVTKCSHHFHLGCIYEWMERSENCPVCGKVMEFNETP 229
>tr|A7PAE6|A7PAE6_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00038082001 PE=4 SV=1 Length = 225
Score = 96.3 bits (238), Expect = 1e-18 Identities = 39/52 (75%), Positives = 43/52 (82%) Frame = -3
Query: 573 DVCPTCLDGYTKENPKISTHCGHHFHLGCIYEWMERSQYCPVCDQEMVFSET 418 DVCPTCL+ YT ENPKI T C HHFHLGCIYEWMERS+ CPVC + M+F ET Sbjct: 173 DVCPTCLEEYTPENPKIMTKCSHHFHLGCIYEWMERSETCPVCGKVMMFDET 224
>tr|B7FJQ8|B7FJQ8_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 227
Score = 95.9 bits (237), Expect = 1e-18 Identities = 38/53 (71%), Positives = 44/53 (83%) Frame = -3
Query: 573 DVCPTCLDGYTKENPKISTHCGHHFHLGCIYEWMERSQYCPVCDQEMVFSETP 415 DVCPTCL+ YT+ENPKI T C HH+HLGCIYEWMERS CPVC + M+F E+P Sbjct: 175 DVCPTCLEEYTEENPKIVTKCNHHYHLGCIYEWMERSDSCPVCGKVMLFDESP 227
>tr|B4FYL2|B4FYL2_MAIZE Protein binding protein OS=Zea mays PE=2 SV=1 Length = 225
Score = 94.7 bits (234), Expect = 3e-18 Identities = 38/53 (71%), Positives = 43/53 (81%) Frame = -3
Query: 573 DVCPTCLDGYTKENPKISTHCGHHFHLGCIYEWMERSQYCPVCDQEMVFSETP 415 DVCPTCL+ YT +NPKI T C HHFHLGCIYEWMERS CP+C +EM F E+P Sbjct: 173 DVCPTCLEEYTPDNPKIITKCCHHFHLGCIYEWMERSDTCPICGKEMEFCESP 225
>tr|Q1KUY5|Q1KUY5_9ROSI Putative uncharacterized protein OS=Cleome spinosa PE=4 SV=1 Length = 230
Score = 94.0 bits (232), Expect = 5e-18 Identities = 39/53 (73%), Positives = 43/53 (81%) Frame = -3
Query: 573 DVCPTCLDGYTKENPKISTHCGHHFHLGCIYEWMERSQYCPVCDQEMVFSETP 415 DVCPTCL+ YT ENPKI T C HHFHL CIYEWMERS+ CPVC + M F+ETP Sbjct: 178 DVCPTCLEEYTLENPKIVTKCFHHFHLACIYEWMERSENCPVCGKVMEFNETP 230
>tr|Q2R0W9|Q2R0W9_ORYSJ Os11g0629300 protein OS=Oryza sativa subsp. japonica GN=Os11g0629300 PE=2 SV=1 Length = 220
Score = 93.6 bits (231), Expect = 7e-18 Identities = 37/52 (71%), Positives = 42/52 (80%) Frame = -3
Query: 573 DVCPTCLDGYTKENPKISTHCGHHFHLGCIYEWMERSQYCPVCDQEMVFSET 418 DVCPTCL+ YT ENP+I C HHFHLGCIYEWMERS+ CPVC ++M F ET Sbjct: 168 DVCPTCLEDYTSENPRIVMQCSHHFHLGCIYEWMERSEACPVCGKKMEFDET 219
>tr|Q1KUQ0|Q1KUQ0_9ROSI Putative uncharacterized protein OS=Cleome spinosa PE=4 SV=1 Length = 278
Score = 93.2 bits (230), Expect = 9e-18 Identities = 39/53 (73%), Positives = 43/53 (81%) Frame = -3
Query: 573 DVCPTCLDGYTKENPKISTHCGHHFHLGCIYEWMERSQYCPVCDQEMVFSETP 415 DVCPT L+ YT ENPKI T C HHFHLGCIYEWMERS+ CPVC + M F+ETP Sbjct: 226 DVCPTYLEEYTVENPKIVTKCSHHFHLGCIYEWMERSENCPVCGKVMEFNETP 278
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