BP914279
Clone id YMU001_000057_B04
Library
Length 553
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000057_B04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTTAAAAGAGATGAATTAAAATTTGGTGATGTGCCTCATCGTTACAAAAGTGTATGTTCA
CAAGGTCTCCTTGAGAGAAAAAAGGGCTACGAACGCATTGTCGTTGTCTCCGAGGATAAA
TCATTGATTTCTAGACAGAGGGCTTCTGGACAAGGAAGCCGGAGGCCTGCACCTGCCTCT
TGGCGTCAAAGCCCAGCACGCGGATGAAGGCTTCGGGGTACTCCTTGGCGCACTCTGCAA
TTTCACGCAGCACAGCGGCGGCATCTTGGCAGCCAAACATGGGCAACTTCCACATCACCC
AGTACCGCCCATCGTAGTAGCCGCTGCCGTGGAAGTGCTCTCGGTACACGCTCCCGATTT
TGTCGAACTCAATGCAAGGGGTCCAGCCTTTTCGGACCATGAAGTCCACCTGCTTCGCAA
TCTGCTCACTTGACAAAGGCGGCAAGTAGGACAGAGTCTCGAACTTCTTGTTGTCATACG
GCTTCCACACAAGCATGGCGCTCACACGGCTGCCATTAGAGATGGCGAGCGGGTTGGGGC
TCTTGGGGGCGAA
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 128
Score (bit) 182.0
E-value 1.0e-45
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914279|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_B04.
(553 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai... 182 1e-45
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai... 181 3e-45
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 179 8e-45
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 178 1e-44
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha... 178 1e-44
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha... 178 1e-44
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai... 177 2e-44
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai... 177 3e-44
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 177 3e-44
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai... 177 4e-44
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha... 177 4e-44
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch... 176 7e-44
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai... 176 9e-44
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha... 176 9e-44
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai... 175 1e-43
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch... 175 1e-43
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch... 175 1e-43
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha... 175 1e-43
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai... 175 2e-43
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha... 175 2e-43
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai... 174 2e-43
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai... 174 3e-43
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha... 174 3e-43
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch... 174 3e-43
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai... 173 4e-43
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai... 173 4e-43
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai... 173 4e-43
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai... 172 8e-43
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha... 172 1e-42
sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small cha... 171 2e-42

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
Length = 181

Score = 182 bits (461), Expect = 1e-45
Identities = 80/128 (62%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 344
SNG RV M VW P KK+ETLSYLPPLS E ++K++D+++R W PC+EF+ + G VY
Sbjct: 50 SNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVY 109

Query: 343 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQA 164
REH H GYYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD RQVQ
Sbjct: 110 REHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQC 169

Query: 163 SGFLVQKP 140
F+V KP
Sbjct: 170 ISFIVAKP 177


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
SV=1
Length = 178

Score = 181 bits (458), Expect = 3e-45
Identities = 82/138 (59%), Positives = 100/138 (72%)
Frame = -1

Query: 553 FAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPC 374
FA S P SNG RV M VW P KKFETLSYLPPL+ EQ+ ++VD+++R GW PC
Sbjct: 41 FADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPC 97

Query: 373 IEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVL 194
IEF K+G VYRE+ + GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+ F R++
Sbjct: 98 IEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRII 157

Query: 193 GFDAKRQVQASGFLVQKP 140
GFD RQVQ FL KP
Sbjct: 158 GFDNTRQVQCISFLTYKP 175


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
Length = 182

Score = 179 bits (454), Expect = 8e-45
Identities = 82/128 (64%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 344
SNG RV M VW P KKFETLSYLPPLSSEQ+AK+VD+++RK PC+EF+ + G VY
Sbjct: 52 SNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVY 111

Query: 343 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQA 164
REH GYYDGRYW MWKLPMFGC D++ VL+E+ EC K YP AFIR++GFD KRQVQ
Sbjct: 112 REHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQI 171

Query: 163 SGFLVQKP 140
F+ KP
Sbjct: 172 ISFIAYKP 179


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
Length = 177

Score = 178 bits (452), Expect = 1e-44
Identities = 80/128 (62%), Positives = 94/128 (73%)
Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 341
SNG RVS M VW P KKFETLSYLPPLS E +AK+VD+++R W PCIEF K G VYR
Sbjct: 50 SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 340 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQAS 161
E+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E K YPE F+R++GFD KRQVQ
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 160 GFLVQKPS 137
F+ KP+
Sbjct: 170 SFIAYKPT 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
Length = 177

Score = 178 bits (452), Expect = 1e-44
Identities = 80/128 (62%), Positives = 94/128 (73%)
Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 341
SNG RVS M VW P KKFETLSYLPPLS E +AK+VD+++R W PCIEF K G VYR
Sbjct: 50 SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 340 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQAS 161
E+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E K YPE F+R++GFD KRQVQ
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 160 GFLVQKPS 137
F+ KP+
Sbjct: 170 SFIAYKPT 177


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
Length = 177

Score = 178 bits (452), Expect = 1e-44
Identities = 80/128 (62%), Positives = 94/128 (73%)
Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 341
SNG RVS M VW P KKFETLSYLPPLS E +AK+VD+++R W PCIEF K G VYR
Sbjct: 50 SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 340 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQAS 161
E+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E K YPE F+R++GFD KRQVQ
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 160 GFLVQKPS 137
F+ KP+
Sbjct: 170 SFIAYKPT 177


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
Length = 180

Score = 177 bits (450), Expect = 2e-44
Identities = 81/130 (62%), Positives = 101/130 (77%), Gaps = 1/130 (0%)
Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 341
+NGSRVS M VW+PY+N KFETLSYLPPLS + +AKQ+D++++ GW PCIEFD G+V R
Sbjct: 51 TNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQGTVTR 110

Query: 340 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEY-PEAFIRVLGFDAKRQVQA 164
E GYYDGRYW MWKLPMFGC D+A+VLREI EC K Y + +IR LGFD RQVQ
Sbjct: 111 EGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLYGKKCYIRCLGFDNTRQVQC 170

Query: 163 SGFLVQKPSV 134
+ F+V +P++
Sbjct: 171 ASFIVHQPTL 180


>sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1
Length = 189

Score = 177 bits (449), Expect = 3e-44
Identities = 78/127 (61%), Positives = 97/127 (76%)
Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 341
SNGSRV M VW PY NKKFETLSYLP L+ EQ+ K+V+++++ W PC+EF++ G + R
Sbjct: 60 SNGSRVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIKR 119

Query: 340 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQAS 161
+ + GYYDGRYWVMWKLPMFGC +A+ VL E+ ECAK YP AFIRV+GFD RQVQ
Sbjct: 120 VYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCI 179

Query: 160 GFLVQKP 140
F+V KP
Sbjct: 180 SFIVHKP 186


>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
Length = 177

Score = 177 bits (449), Expect = 3e-44
Identities = 79/128 (61%), Positives = 94/128 (73%)
Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 341
SNG +VS M VW P KKFETLSYLPPLS E +AK+VD+++R W PCIEF K G VYR
Sbjct: 50 SNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 340 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQAS 161
E+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E K YPE F+R++GFD KRQVQ
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 160 GFLVQKPS 137
F+ KP+
Sbjct: 170 SFIAYKPT 177


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
Length = 171

Score = 177 bits (448), Expect = 4e-44
Identities = 77/127 (60%), Positives = 96/127 (75%)
Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 341
SNG RV M VW P+ N KFETLSYLP L+ EQ+ K+V++++R W PC+EFD GS+ R
Sbjct: 44 SNGGRVRCMQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISR 103

Query: 340 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQAS 161
++ GYYDGRYWVMWKLPMFGC +A+ V+ E+ ECAK YP+AFIRV+GFD RQVQ
Sbjct: 104 KYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCI 163

Query: 160 GFLVQKP 140
F+V KP
Sbjct: 164 SFIVHKP 170


tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 139
Score (bit) 266.0
E-value 5.0e-70
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914279|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_B04.
(553 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 266 5e-70
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 185 2e-45
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c... 184 3e-45
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c... 183 5e-45
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c... 183 6e-45
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c... 182 8e-45
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c... 182 8e-45
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 182 8e-45
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c... 181 2e-44
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c... 181 3e-44
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c... 180 5e-44
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c... 180 5e-44
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c... 180 5e-44
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c... 178 1e-43
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c... 178 2e-43
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza... 178 2e-43
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c... 178 2e-43
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c... 177 3e-43
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c... 177 4e-43
tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c... 176 6e-43
tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c... 176 6e-43
tr|A9NMJ1|A9NMJ1_PICSI Ribulose bisphosphate carboxylase small c... 176 6e-43
tr|A9NL36|A9NL36_PICSI Ribulose bisphosphate carboxylase small c... 176 6e-43
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c... 176 7e-43
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c... 176 7e-43
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c... 176 1e-42
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c... 176 1e-42
tr|Q9SDY9|Q9SDY9_9POAL Ribulose bisphosphate carboxylase small c... 175 1e-42
tr|Q9SAW7|Q9SAW7_TRITU Ribulose bisphosphate carboxylase small c... 175 1e-42
tr|A9NM29|A9NM29_PICSI Ribulose bisphosphate carboxylase small c... 175 1e-42

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
Length = 174

Score = 266 bits (680), Expect = 5e-70
Identities = 121/139 (87%), Positives = 132/139 (94%)
Frame = -1

Query: 553 FAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPC 374
FAPK NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAKQV++MVRKGWTPC
Sbjct: 35 FAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPC 94

Query: 373 IEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVL 194
IEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREIAECAKEYP AFIRVL
Sbjct: 95 IEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVL 154

Query: 193 GFDAKRQVQASGFLVQKPS 137
GFDAKRQVQ +GFLV+KPS
Sbjct: 155 GFDAKRQVQVAGFLVKKPS 173


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87740 PE=3 SV=1
Length = 179

Score = 185 bits (469), Expect = 2e-45
Identities = 86/142 (60%), Positives = 105/142 (73%), Gaps = 3/142 (2%)
Frame = -1

Query: 553 FAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPC 374
FA K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQVDFM+++ PC
Sbjct: 38 FASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPC 97

Query: 373 IEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFI 203
IEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D+A VLREI EC + +P ++
Sbjct: 98 IEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWV 157

Query: 202 RVLGFDAKRQVQASGFLVQKPS 137
RVLGFD+K+QVQ GFLV +P+
Sbjct: 158 RVLGFDSKKQVQICGFLVARPN 179


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
chain OS=Lactuca sativa PE=2 SV=1
Length = 181

Score = 184 bits (467), Expect = 3e-45
Identities = 80/128 (62%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 344
SNG RV M VW P KK+ETLSYLPPLS E ++K++D+++R W PC+EF+ + G VY
Sbjct: 50 SNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVY 109

Query: 343 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQA 164
REH H GYYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD+ RQVQ
Sbjct: 110 REHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQC 169

Query: 163 SGFLVQKP 140
F+V KP
Sbjct: 170 ISFIVSKP 177


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_221004 PE=3 SV=1
Length = 184

Score = 183 bits (465), Expect = 5e-45
Identities = 84/142 (59%), Positives = 105/142 (73%), Gaps = 3/142 (2%)
Frame = -1

Query: 553 FAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPC 374
F+ K+ A+ NGSRV M VW P KFET SYLPPL+ +QIAKQVD+M+++ PC
Sbjct: 43 FSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPC 102

Query: 373 IEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFI 203
IEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI EC ++P ++
Sbjct: 103 IEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWV 162

Query: 202 RVLGFDAKRQVQASGFLVQKPS 137
RVLGFD+K+QVQ GFLV +P+
Sbjct: 163 RVLGFDSKKQVQICGFLVSRPN 184


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
chain OS=Populus trichocarpa PE=2 SV=1
Length = 170

Score = 183 bits (464), Expect = 6e-45
Identities = 78/128 (60%), Positives = 97/128 (75%)
Frame = -1

Query: 523 ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVY 344
+SNGS+ M W P +NKKFE LSYLPPLS + IAK++D+M++KGW PC+EFD++GSV
Sbjct: 41 VSNGSKTFCMKTWNPINNKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVGSVR 100

Query: 343 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQA 164
REH GYYDGRYW +WKLPMFGC D++ VL EI EC K YP+A+IR L FD K Q Q
Sbjct: 101 REHSRMPGYYDGRYWTLWKLPMFGCTDSSQVLEEIHECKKAYPDAYIRCLAFDNKHQGQC 160

Query: 163 SGFLVQKP 140
F++QKP
Sbjct: 161 MAFVIQKP 168


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
Length = 214

Score = 182 bits (463), Expect = 8e-45
Identities = 83/142 (58%), Positives = 105/142 (73%), Gaps = 3/142 (2%)
Frame = -1

Query: 553 FAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPC 374
F+ K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQVD+M+++ PC
Sbjct: 73 FSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPC 132

Query: 373 IEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFI 203
IEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI EC ++P ++
Sbjct: 133 IEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWV 192

Query: 202 RVLGFDAKRQVQASGFLVQKPS 137
RVLGFD+K+QVQ GFLV +P+
Sbjct: 193 RVLGFDSKKQVQICGFLVSRPN 214


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
PE=2 SV=1
Length = 184

Score = 182 bits (463), Expect = 8e-45
Identities = 84/142 (59%), Positives = 103/142 (72%), Gaps = 3/142 (2%)
Frame = -1

Query: 553 FAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPC 374
F KS ++ NGSRV M VW P KFET SYLPPLS +QIA+QVD+M+++ PC
Sbjct: 43 FTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQVDYMIQQNLIPC 102

Query: 373 IEFDKIGSVYREHFHGSG---YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFI 203
IEFD +G+V R +F GSG YYDGRYW MWKLPMFGC D++ VLREI EC YP ++
Sbjct: 103 IEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTSYPSCWV 162

Query: 202 RVLGFDAKRQVQASGFLVQKPS 137
RVLGFD+K+QVQ GFLV +P+
Sbjct: 163 RVLGFDSKKQVQICGFLVARPN 184


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87752 PE=3 SV=1
Length = 179

Score = 182 bits (463), Expect = 8e-45
Identities = 85/141 (60%), Positives = 104/141 (73%), Gaps = 3/141 (2%)
Frame = -1

Query: 550 APKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCI 371
A K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQVDFM+++ PCI
Sbjct: 39 ASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCI 98

Query: 370 EFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIR 200
EFD +GSV R +F G SGYYDGRYW MWKLPMFGC D+A VLREI EC + +P ++R
Sbjct: 99 EFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVR 158

Query: 199 VLGFDAKRQVQASGFLVQKPS 137
VLGFD+K+QVQ GFLV +P+
Sbjct: 159 VLGFDSKKQVQICGFLVARPN 179


>tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small
chain OS=Ammopiptanthus mongolicus PE=2 SV=1
Length = 174

Score = 181 bits (460), Expect = 2e-44
Identities = 79/128 (61%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 344
+NG RV MLVW P KKFETLSYLPPLS E + K+V++++RKGW PC+EF+ + G VY
Sbjct: 42 NNGGRVQCMLVWPPLGRKKFETLSYLPPLSIESLTKEVEYLLRKGWVPCLEFELEHGFVY 101

Query: 343 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQA 164
RE+ GYYDGRYW MWKLPMFGC DA+ V++E+ EC KEYP AF+R++GFD KRQVQ
Sbjct: 102 RENNRSPGYYDGRYWTMWKLPMFGCSDASQVMKELEECKKEYPTAFVRIIGFDNKRQVQC 161

Query: 163 SGFLVQKP 140
F+ KP
Sbjct: 162 ISFIAYKP 169


>tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small
chain OS=Picea sitchensis PE=2 SV=1
Length = 159

Score = 181 bits (458), Expect = 3e-44
Identities = 81/136 (59%), Positives = 101/136 (74%)
Frame = -1

Query: 547 PKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIE 368
PK+ N SNG RV M VW PY+N KFETLSYLP L+ EQ+ K+V++++R W PC+E
Sbjct: 21 PKTSNGNGSSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLE 80

Query: 367 FDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGF 188
FD+ G + R++ GYYDGRYWVMWKLPMFGC +A+ VL E+ ECAK YP+AFIRV+GF
Sbjct: 81 FDEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGF 140

Query: 187 DAKRQVQASGFLVQKP 140
D RQVQ F+V KP
Sbjct: 141 DNVRQVQCISFIVHKP 156