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NBDC - LSDB Archive
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BP914279
Clone id YMU001_000057_B04
Library
Length 553
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000057_B04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTTAAAAGAGATGAATTAAAATTTGGTGATGTGCCTCATCGTTACAAAAGTGTATGTTCA
CAAGGTCTCCTTGAGAGAAAAAAGGGCTACGAACGCATTGTCGTTGTCTCCGAGGATAAA
TCATTGATTTCTAGACAGAGGGCTTCTGGACAAGGAAGCCGGAGGCCTGCACCTGCCTCT
TGGCGTCAAAGCCCAGCACGCGGATGAAGGCTTCGGGGTACTCCTTGGCGCACTCTGCAA
TTTCACGCAGCACAGCGGCGGCATCTTGGCAGCCAAACATGGGCAACTTCCACATCACCC
AGTACCGCCCATCGTAGTAGCCGCTGCCGTGGAAGTGCTCTCGGTACACGCTCCCGATTT
TGTCGAACTCAATGCAAGGGGTCCAGCCTTTTCGGACCATGAAGTCCACCTGCTTCGCAA
TCTGCTCACTTGACAAAGGCGGCAAGTAGGACAGAGTCTCGAACTTCTTGTTGTCATACG
GCTTCCACACAAGCATGGCGCTCACACGGCTGCCATTAGAGATGGCGAGCGGGTTGGGGC
TCTTGGGGGCGAA
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 128
Score (bit) 182.0
E-value 1.0e-45
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914279|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_B04.
         (553 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   182   1e-45
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   181   3e-45
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   179   8e-45
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   178   1e-44
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   178   1e-44
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   178   1e-44
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   177   2e-44
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   177   3e-44
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   177   3e-44
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   177   4e-44
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   177   4e-44
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   176   7e-44
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   176   9e-44
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   176   9e-44
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   175   1e-43
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   175   1e-43
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   175   1e-43
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   175   1e-43
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   175   2e-43
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   175   2e-43
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   174   2e-43
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   174   3e-43
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   174   3e-43
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   174   3e-43
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   173   4e-43
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   173   4e-43
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   173   4e-43
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   172   8e-43
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   172   1e-42
sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small cha...   171   2e-42

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  182 bits (461), Expect = 1e-45
 Identities = 80/128 (62%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
 Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 344
           SNG RV  M VW P   KK+ETLSYLPPLS E ++K++D+++R  W PC+EF+ + G VY
Sbjct: 50  SNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVY 109

Query: 343 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQA 164
           REH H  GYYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD  RQVQ 
Sbjct: 110 REHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQC 169

Query: 163 SGFLVQKP 140
             F+V KP
Sbjct: 170 ISFIVAKP 177


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  181 bits (458), Expect = 3e-45
 Identities = 82/138 (59%), Positives = 100/138 (72%)
 Frame = -1

Query: 553 FAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPC 374
           FA  S  P   SNG RV  M VW P   KKFETLSYLPPL+ EQ+ ++VD+++R GW PC
Sbjct: 41  FADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPC 97

Query: 373 IEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVL 194
           IEF K+G VYRE+ +  GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+ F R++
Sbjct: 98  IEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRII 157

Query: 193 GFDAKRQVQASGFLVQKP 140
           GFD  RQVQ   FL  KP
Sbjct: 158 GFDNTRQVQCISFLTYKP 175


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  179 bits (454), Expect = 8e-45
 Identities = 82/128 (64%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
 Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 344
           SNG RV  M VW P   KKFETLSYLPPLSSEQ+AK+VD+++RK   PC+EF+ + G VY
Sbjct: 52  SNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVY 111

Query: 343 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQA 164
           REH    GYYDGRYW MWKLPMFGC D++ VL+E+ EC K YP AFIR++GFD KRQVQ 
Sbjct: 112 REHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQI 171

Query: 163 SGFLVQKP 140
             F+  KP
Sbjct: 172 ISFIAYKP 179


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  178 bits (452), Expect = 1e-44
 Identities = 80/128 (62%), Positives = 94/128 (73%)
 Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 341
           SNG RVS M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYR
Sbjct: 50  SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 340 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQAS 161
           E+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ  
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 160 GFLVQKPS 137
            F+  KP+
Sbjct: 170 SFIAYKPT 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  178 bits (452), Expect = 1e-44
 Identities = 80/128 (62%), Positives = 94/128 (73%)
 Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 341
           SNG RVS M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYR
Sbjct: 50  SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 340 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQAS 161
           E+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ  
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 160 GFLVQKPS 137
            F+  KP+
Sbjct: 170 SFIAYKPT 177


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
          Length = 177

 Score =  178 bits (452), Expect = 1e-44
 Identities = 80/128 (62%), Positives = 94/128 (73%)
 Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 341
           SNG RVS M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYR
Sbjct: 50  SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 340 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQAS 161
           E+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ  
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 160 GFLVQKPS 137
            F+  KP+
Sbjct: 170 SFIAYKPT 177


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score =  177 bits (450), Expect = 2e-44
 Identities = 81/130 (62%), Positives = 101/130 (77%), Gaps = 1/130 (0%)
 Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 341
           +NGSRVS M VW+PY+N KFETLSYLPPLS + +AKQ+D++++ GW PCIEFD  G+V R
Sbjct: 51  TNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQGTVTR 110

Query: 340 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEY-PEAFIRVLGFDAKRQVQA 164
           E     GYYDGRYW MWKLPMFGC D+A+VLREI EC K Y  + +IR LGFD  RQVQ 
Sbjct: 111 EGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLYGKKCYIRCLGFDNTRQVQC 170

Query: 163 SGFLVQKPSV 134
           + F+V +P++
Sbjct: 171 ASFIVHQPTL 180


>sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1
          Length = 189

 Score =  177 bits (449), Expect = 3e-44
 Identities = 78/127 (61%), Positives = 97/127 (76%)
 Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 341
           SNGSRV  M VW PY NKKFETLSYLP L+ EQ+ K+V+++++  W PC+EF++ G + R
Sbjct: 60  SNGSRVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIKR 119

Query: 340 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQAS 161
            + +  GYYDGRYWVMWKLPMFGC +A+ VL E+ ECAK YP AFIRV+GFD  RQVQ  
Sbjct: 120 VYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCI 179

Query: 160 GFLVQKP 140
            F+V KP
Sbjct: 180 SFIVHKP 186


>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
          Length = 177

 Score =  177 bits (449), Expect = 3e-44
 Identities = 79/128 (61%), Positives = 94/128 (73%)
 Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 341
           SNG +VS M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYR
Sbjct: 50  SNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 340 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQAS 161
           E+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ  
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 160 GFLVQKPS 137
            F+  KP+
Sbjct: 170 SFIAYKPT 177


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  177 bits (448), Expect = 4e-44
 Identities = 77/127 (60%), Positives = 96/127 (75%)
 Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 341
           SNG RV  M VW P+ N KFETLSYLP L+ EQ+ K+V++++R  W PC+EFD  GS+ R
Sbjct: 44  SNGGRVRCMQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISR 103

Query: 340 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQAS 161
           ++    GYYDGRYWVMWKLPMFGC +A+ V+ E+ ECAK YP+AFIRV+GFD  RQVQ  
Sbjct: 104 KYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCI 163

Query: 160 GFLVQKP 140
            F+V KP
Sbjct: 164 SFIVHKP 170
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 139
Score (bit) 266.0
E-value 5.0e-70
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914279|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_B04.
         (553 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   266   5e-70
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   185   2e-45
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   184   3e-45
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   183   5e-45
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   183   6e-45
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   182   8e-45
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   182   8e-45
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   182   8e-45
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   181   2e-44
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   181   3e-44
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   180   5e-44
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   180   5e-44
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   180   5e-44
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   178   1e-43
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c...   178   2e-43
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza...   178   2e-43
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c...   178   2e-43
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   177   3e-43
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   177   4e-43
tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c...   176   6e-43
tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c...   176   6e-43
tr|A9NMJ1|A9NMJ1_PICSI Ribulose bisphosphate carboxylase small c...   176   6e-43
tr|A9NL36|A9NL36_PICSI Ribulose bisphosphate carboxylase small c...   176   6e-43
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   176   7e-43
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   176   7e-43
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c...   176   1e-42
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c...   176   1e-42
tr|Q9SDY9|Q9SDY9_9POAL Ribulose bisphosphate carboxylase small c...   175   1e-42
tr|Q9SAW7|Q9SAW7_TRITU Ribulose bisphosphate carboxylase small c...   175   1e-42
tr|A9NM29|A9NM29_PICSI Ribulose bisphosphate carboxylase small c...   175   1e-42

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  266 bits (680), Expect = 5e-70
 Identities = 121/139 (87%), Positives = 132/139 (94%)
 Frame = -1

Query: 553 FAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPC 374
           FAPK  NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAKQV++MVRKGWTPC
Sbjct: 35  FAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPC 94

Query: 373 IEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVL 194
           IEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREIAECAKEYP AFIRVL
Sbjct: 95  IEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVL 154

Query: 193 GFDAKRQVQASGFLVQKPS 137
           GFDAKRQVQ +GFLV+KPS
Sbjct: 155 GFDAKRQVQVAGFLVKKPS 173


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  185 bits (469), Expect = 2e-45
 Identities = 86/142 (60%), Positives = 105/142 (73%), Gaps = 3/142 (2%)
 Frame = -1

Query: 553 FAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPC 374
           FA K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQVDFM+++   PC
Sbjct: 38  FASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPC 97

Query: 373 IEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFI 203
           IEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI EC + +P  ++
Sbjct: 98  IEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWV 157

Query: 202 RVLGFDAKRQVQASGFLVQKPS 137
           RVLGFD+K+QVQ  GFLV +P+
Sbjct: 158 RVLGFDSKKQVQICGFLVARPN 179


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  184 bits (467), Expect = 3e-45
 Identities = 80/128 (62%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
 Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 344
           SNG RV  M VW P   KK+ETLSYLPPLS E ++K++D+++R  W PC+EF+ + G VY
Sbjct: 50  SNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVY 109

Query: 343 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQA 164
           REH H  GYYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD+ RQVQ 
Sbjct: 110 REHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQC 169

Query: 163 SGFLVQKP 140
             F+V KP
Sbjct: 170 ISFIVSKP 177


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  183 bits (465), Expect = 5e-45
 Identities = 84/142 (59%), Positives = 105/142 (73%), Gaps = 3/142 (2%)
 Frame = -1

Query: 553 FAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPC 374
           F+ K+    A+ NGSRV  M VW P    KFET SYLPPL+ +QIAKQVD+M+++   PC
Sbjct: 43  FSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPC 102

Query: 373 IEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFI 203
           IEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI EC  ++P  ++
Sbjct: 103 IEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWV 162

Query: 202 RVLGFDAKRQVQASGFLVQKPS 137
           RVLGFD+K+QVQ  GFLV +P+
Sbjct: 163 RVLGFDSKKQVQICGFLVSRPN 184


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  183 bits (464), Expect = 6e-45
 Identities = 78/128 (60%), Positives = 97/128 (75%)
 Frame = -1

Query: 523 ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVY 344
           +SNGS+   M  W P +NKKFE LSYLPPLS + IAK++D+M++KGW PC+EFD++GSV 
Sbjct: 41  VSNGSKTFCMKTWNPINNKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVGSVR 100

Query: 343 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQA 164
           REH    GYYDGRYW +WKLPMFGC D++ VL EI EC K YP+A+IR L FD K Q Q 
Sbjct: 101 REHSRMPGYYDGRYWTLWKLPMFGCTDSSQVLEEIHECKKAYPDAYIRCLAFDNKHQGQC 160

Query: 163 SGFLVQKP 140
             F++QKP
Sbjct: 161 MAFVIQKP 168


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  182 bits (463), Expect = 8e-45
 Identities = 83/142 (58%), Positives = 105/142 (73%), Gaps = 3/142 (2%)
 Frame = -1

Query: 553 FAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPC 374
           F+ K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQVD+M+++   PC
Sbjct: 73  FSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPC 132

Query: 373 IEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFI 203
           IEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI EC  ++P  ++
Sbjct: 133 IEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWV 192

Query: 202 RVLGFDAKRQVQASGFLVQKPS 137
           RVLGFD+K+QVQ  GFLV +P+
Sbjct: 193 RVLGFDSKKQVQICGFLVSRPN 214


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  182 bits (463), Expect = 8e-45
 Identities = 84/142 (59%), Positives = 103/142 (72%), Gaps = 3/142 (2%)
 Frame = -1

Query: 553 FAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPC 374
           F  KS    ++ NGSRV  M VW P    KFET SYLPPLS +QIA+QVD+M+++   PC
Sbjct: 43  FTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQVDYMIQQNLIPC 102

Query: 373 IEFDKIGSVYREHFHGSG---YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFI 203
           IEFD +G+V R +F GSG   YYDGRYW MWKLPMFGC D++ VLREI EC   YP  ++
Sbjct: 103 IEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTSYPSCWV 162

Query: 202 RVLGFDAKRQVQASGFLVQKPS 137
           RVLGFD+K+QVQ  GFLV +P+
Sbjct: 163 RVLGFDSKKQVQICGFLVARPN 184


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  182 bits (463), Expect = 8e-45
 Identities = 85/141 (60%), Positives = 104/141 (73%), Gaps = 3/141 (2%)
 Frame = -1

Query: 550 APKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCI 371
           A K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQVDFM+++   PCI
Sbjct: 39  ASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCI 98

Query: 370 EFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIR 200
           EFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI EC + +P  ++R
Sbjct: 99  EFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVR 158

Query: 199 VLGFDAKRQVQASGFLVQKPS 137
           VLGFD+K+QVQ  GFLV +P+
Sbjct: 159 VLGFDSKKQVQICGFLVARPN 179


>tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small
           chain OS=Ammopiptanthus mongolicus PE=2 SV=1
          Length = 174

 Score =  181 bits (460), Expect = 2e-44
 Identities = 79/128 (61%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
 Frame = -1

Query: 520 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 344
           +NG RV  MLVW P   KKFETLSYLPPLS E + K+V++++RKGW PC+EF+ + G VY
Sbjct: 42  NNGGRVQCMLVWPPLGRKKFETLSYLPPLSIESLTKEVEYLLRKGWVPCLEFELEHGFVY 101

Query: 343 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQA 164
           RE+    GYYDGRYW MWKLPMFGC DA+ V++E+ EC KEYP AF+R++GFD KRQVQ 
Sbjct: 102 RENNRSPGYYDGRYWTMWKLPMFGCSDASQVMKELEECKKEYPTAFVRIIGFDNKRQVQC 161

Query: 163 SGFLVQKP 140
             F+  KP
Sbjct: 162 ISFIAYKP 169


>tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small
           chain OS=Picea sitchensis PE=2 SV=1
          Length = 159

 Score =  181 bits (458), Expect = 3e-44
 Identities = 81/136 (59%), Positives = 101/136 (74%)
 Frame = -1

Query: 547 PKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIE 368
           PK+ N    SNG RV  M VW PY+N KFETLSYLP L+ EQ+ K+V++++R  W PC+E
Sbjct: 21  PKTSNGNGSSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLE 80

Query: 367 FDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGF 188
           FD+ G + R++    GYYDGRYWVMWKLPMFGC +A+ VL E+ ECAK YP+AFIRV+GF
Sbjct: 81  FDEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGF 140

Query: 187 DAKRQVQASGFLVQKP 140
           D  RQVQ   F+V KP
Sbjct: 141 DNVRQVQCISFIVHKP 156