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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914283
Clone id YMU001_000057_B09
Library
Length 570
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000057_B09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTTAGGAAATAAGAATATGATCATTGACATGATTAAAAATGAGCTTCCCAGAGAT
GGGATGAAAGGAAAATTCATACAACTGCCCTTGATGGACAAGGGAACCTTGCATTTAGGA
TAAACTTATGCTACAAGCAATGCATGGAATTAAAAATCTACTAAAAATCTACAAAGGTTC
TAGATGATTTGGGAAAGGGTAGGGGTCCTATGGATAAGCCTATGCTTACCCAATACCTCA
AGGGAATTGTGGTGTGCATACATGGGTGTGCGCTGTCCTTTCTAAGCCAATTAGACGAAT
GAACTTCTTCTTCCATGGTTGCATGCTAAATGCACGCGAAATGCTGATGTTATTGTAAAA
CCTACGATTCTCTTTGTATATGTCAAATGTATACAGAATTGAAAATGGCTATGCCATCCA
TTGTTGACCAAGGGCCAACCATCTCTTCTAGAGCCACCACTGTAAGTTCCACCTTGGTGA
GCGGATGGAACAAATACAAGAGCTAAAGAGACGGACCTAGCTGCATCTGTGATCAAGAAC
AAGGTGTGAGATGCTATAGATTGGGTTGGG
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914283|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_B09.
         (570 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id B3EQ75
Definition tr|B3EQ75|B3EQ75_CHLPB Putative uncharacterized protein OS=Chlorobium phaeobacteroides (strain BS1)
Align length 56
Score (bit) 33.9
E-value 6.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914283|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_B09.
         (570 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3EQ75|B3EQ75_CHLPB Putative uncharacterized protein OS=Chlor...    34   6.5  
tr|Q07HW1|Q07HW1_RHOP5 Alpha,alpha-trehalose-phosphate synthase ...    33   8.5  

>tr|B3EQ75|B3EQ75_CHLPB Putative uncharacterized protein
           OS=Chlorobium phaeobacteroides (strain BS1)
           GN=Cphamn1_2479 PE=4 SV=1
          Length = 398

 Score = 33.9 bits (76), Expect = 6.5
 Identities = 19/56 (33%), Positives = 27/56 (48%)
 Frame = -2

Query: 464 YSGGSRRDGWPLVNNGWHSHFQFCIHLTYTKRIVGFTITSAFRVHLACNHGRRSSF 297
           Y GG+  D +PLVN  W+    +C  L+  KR   F + +      AC  G R+ F
Sbjct: 216 YDGGTEGDRYPLVNVSWNDAVAYCRWLS-EKRGELFRLPTEAEWEYACRAGTRTPF 270


>tr|Q07HW1|Q07HW1_RHOP5 Alpha,alpha-trehalose-phosphate synthase
           (UDP-forming) OS=Rhodopseudomonas palustris (strain
           BisA53) GN=RPE_4553 PE=4 SV=1
          Length = 505

 Score = 33.5 bits (75), Expect = 8.5
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -2

Query: 539 FLITDAARSVSLALVFVPSAHQGGTYSGGSRRDGWPLVNN 420
           F   +A  S +LALV +P+AH GG Y G +    WP +++
Sbjct: 54  FAAIEALGSGALALVDLPAAHYGGYYEGFANSALWPALHS 93