BP914284
Clone id YMU001_000057_B10
Library
Length 411
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000057_B10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ACCTAGATTTGTATCTTTTTAGAGACAGATGATTGTTGATGCTCGTTATCCTCTATGTAG
ATTGTGATTACAAGTAGCTATGATGACCATATTCGCGATATGATGGAGTTTGTCACAAGT
TAGTGACGTGGCACTGGCAAGGGTTAGGGTTTTTAGAACCTAATCTACTACTTGAACCTC
TTGGCCGAGGGGCTGTCAGGTGCAACAGAATTGAAATGGTGAAGATCTAGTTTTACACTT
CCATAAAATCCTTTCTTTCTTTCCTTGCGTTAGTGATCCCTTTTTGCTTGAATGATGGTT
CCTTTTACTTTCCCTTGAAGAGAGGGAGTGAGAGAATGCAGTAGAGATGTATAAAGGTTT
ACGTTAAAAATAAGACCGACGAAGAAGACAAGCCAATGTACAAAAGCGAAT
■■Homology search results ■■ -
sp_hit_id Q3V0C1
Definition sp|Q3V0C1|ZMAT1_MOUSE Zinc finger matrin-type protein 1 OS=Mus musculus
Align length 30
Score (bit) 29.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914284|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_B10.
(411 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q3V0C1|ZMAT1_MOUSE Zinc finger matrin-type protein 1 OS=Mus m... 30 4.9
sp|Q5H9K5|ZMAT1_HUMAN Zinc finger matrin-type protein 1 OS=Homo ... 29 6.5
sp|Q9ERK9|P2RY6_MOUSE P2Y purinoceptor 6 OS=Mus musculus GN=P2ry... 29 6.5
sp|Q9TTM9|ADA1D_PIG Alpha-1D adrenergic receptor OS=Sus scrofa G... 29 8.5

>sp|Q3V0C1|ZMAT1_MOUSE Zinc finger matrin-type protein 1 OS=Mus
musculus GN=Zmat1 PE=2 SV=2
Length = 714

Score = 29.6 bits (65), Expect = 4.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1

Query: 330 HSLSSRESKRNHHSSKKGSLTQGKKERILW 241
H SS + +R H KK S+ + +E ILW
Sbjct: 678 HETSSEKEERKHKKEKKKSVEERTEEEILW 707


>sp|Q5H9K5|ZMAT1_HUMAN Zinc finger matrin-type protein 1 OS=Homo
sapiens GN=ZMAT1 PE=2 SV=1
Length = 638

Score = 29.3 bits (64), Expect = 6.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1

Query: 333 SHSLSSRESKRNHHSSKKGSLTQGKKERILW 241
SH + S + +R H KK S+ + +E +LW
Sbjct: 601 SHDVPSEKEERKHRKEKKKSVEERTEEEMLW 631


>sp|Q9ERK9|P2RY6_MOUSE P2Y purinoceptor 6 OS=Mus musculus GN=P2ry6
PE=2 SV=1
Length = 328

Score = 29.3 bits (64), Expect = 6.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3

Query: 90 YSRYDGVCHKLVTWHWQG 143
+ RY G+CH L +WH +G
Sbjct: 122 FQRYLGICHPLASWHKRG 139


>sp|Q9TTM9|ADA1D_PIG Alpha-1D adrenergic receptor OS=Sus scrofa
GN=ADRA1D PE=3 SV=1
Length = 571

Score = 28.9 bits (63), Expect = 8.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3

Query: 139 CQCHVTNL*QTPSYREYGHH 80
CQCH + + P +R YGHH
Sbjct: 419 CQCHHSRRRRRPLWRAYGHH 438


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914284|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_B10.
(411 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******