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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914292
Clone id YMU001_000057_C06
Library
Length 419
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000057_C06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GATCAATGTTTTCAATTGAAAATTCATAGAAGCTGTTAGACAGAGCTACGGTTCTCCCAT
ACTTCCTACACAGCCTTAATACTTTGAACGTGAGCAGGATCCTACCCACAAAGATCGTTG
CCAGCTATCAATATGCCAATAACAATTGTAAATGTTTACAACTCTTCTTGACACACGCTT
GGGCTCTTAAGAGACTCCTGCTACTGCTACATTAAGATCTCAATTCAAAAGATGACTCCA
AGATATCTTGAACCTCTTCAAGCGTCTTAACCCTATAGTTGGGTTGCTCATCTGGGCTAA
GTTGCCTGTCATCATATCGTCCTGTAAGATCCAATAAACATGTGACAGCTCCTGCACGGT
TGCCACAAGCTATATCGTCTTTTGCACTATCTCCAATCATCATAACCTCTGCAGGTCGC
■■Homology search results ■■ -
sp_hit_id Q8TWR2
Definition sp|Q8TWR2|Y970_METKA Uncharacterized HAD-hydrolase MK0970 OS=Methanopyrus kandleri
Align length 60
Score (bit) 35.0
E-value 0.12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914292|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_C06.
         (419 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8TWR2|Y970_METKA Uncharacterized HAD-hydrolase MK0970 OS=Met...    35   0.12 
sp|P0A8Y1|YJJG_ECOLI 5'-nucleotidase yjjG OS=Escherichia coli (s...    35   0.15 
sp|P0A8Y2|YJJG_ECO57 5'-nucleotidase yjjG OS=Escherichia coli O1...    35   0.15 
sp|Q96GD0|PLPP_HUMAN Pyridoxal phosphate phosphatase OS=Homo sap...    33   0.58 
sp|Q5BJJ5|HDHD2_DANRE Haloacid dehalogenase-like hydrolase domai...    33   0.58 
sp|O06480|YFNB_BACSU Putative HAD-hydrolase yfnB OS=Bacillus sub...    31   1.7  
sp|Q8VD52|PLPP_RAT Pyridoxal phosphate phosphatase OS=Rattus nor...    31   1.7  
sp|P60487|PLPP_MOUSE Pyridoxal phosphate phosphatase OS=Mus musc...    31   2.2  
sp|P94512|YSAA_BACSU Putative uncharacterized hydrolase ysaA OS=...    30   2.9  
sp|Q7Q3N5|PORCN_ANOGA Probable protein-cysteine N-palmitoyltrans...    30   2.9  
sp|Q3ZCH9|HDHD2_BOVIN Haloacid dehalogenase-like hydrolase domai...    30   3.8  
sp|Q7MH14|GPH_VIBVY Phosphoglycolate phosphatase OS=Vibrio vulni...    30   3.8  
sp|Q8DCT7|GPH_VIBVU Phosphoglycolate phosphatase OS=Vibrio vulni...    30   3.8  
sp|Q8XIY6|PPAX_CLOPE Putative pyrophosphatase ppaX OS=Clostridiu...    30   4.9  
sp|Q5R4B4|HDHD2_PONAB Haloacid dehalogenase-like hydrolase domai...    30   4.9  
sp|Q9H0R4|HDHD2_HUMAN Haloacid dehalogenase-like hydrolase domai...    30   4.9  
sp|Q3ZBF9|PLPP_BOVIN Pyridoxal phosphate phosphatase OS=Bos taur...    29   6.4  
sp|Q6AYR6|HDHD2_RAT Haloacid dehalogenase-like hydrolase domain-...    29   6.4  
sp|Q3UGR5|HDHD2_MOUSE Haloacid dehalogenase-like hydrolase domai...    29   6.4  
sp|Q4FPT7|GPH_PSYA2 Phosphoglycolate phosphatase OS=Psychrobacte...    29   8.4  

>sp|Q8TWR2|Y970_METKA Uncharacterized HAD-hydrolase MK0970
           OS=Methanopyrus kandleri GN=MK0970 PE=3 SV=2
          Length = 233

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = -2

Query: 418 RPAEVMMIGDSAKDDIACGNRAGAVTCLLDLTGRYDDRQ-LSPDEQPNYRVKTLEEVQDI 242
           +P E + +GD    DI   NRAG VT  +   G+Y D +  + D+ P++ +    E+ D+
Sbjct: 168 KPEEAVYVGDRLDKDIRGANRAGMVTVRI-RRGKYQDMEPRNDDDVPDFEIDRPRELLDV 226


>sp|P0A8Y1|YJJG_ECOLI 5'-nucleotidase yjjG OS=Escherichia coli
           (strain K12) GN=yjjG PE=1 SV=1
          Length = 225

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = -2

Query: 412 AEVMMIGDSAKDDIACGNRAGAVTCLLDLTGRYDDRQLSPDEQPNYRVKTLEEVQDI 242
           + V+M+GD+A+ DI  G  AG  TC L+   R     ++    P + V +L E++ +
Sbjct: 169 SRVLMVGDTAESDILGGINAGLATCWLNAHHREQPEGIA----PTWTVSSLHELEQL 221


>sp|P0A8Y2|YJJG_ECO57 5'-nucleotidase yjjG OS=Escherichia coli
           O157:H7 GN=yjjG PE=3 SV=1
          Length = 225

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = -2

Query: 412 AEVMMIGDSAKDDIACGNRAGAVTCLLDLTGRYDDRQLSPDEQPNYRVKTLEEVQDI 242
           + V+M+GD+A+ DI  G  AG  TC L+   R     ++    P + V +L E++ +
Sbjct: 169 SRVLMVGDTAESDILGGINAGLATCWLNAHHREQPEGIA----PTWTVSSLHELEQL 221


>sp|Q96GD0|PLPP_HUMAN Pyridoxal phosphate phosphatase OS=Homo
           sapiens GN=PDXP PE=1 SV=2
          Length = 296

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
 Frame = -2

Query: 415 PAEVMMIGDSAKDDIACGNRAGAVTCLLDLTG--RYDDRQL-----SPDEQPNYRVKTLE 257
           PA  +M+GD  + DI  G+R G +T +L LTG  R ++ Q        D  P+Y V+++ 
Sbjct: 230 PARTLMVGDRLETDILFGHRCG-MTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIA 288

Query: 256 EVQD 245
           ++ +
Sbjct: 289 DLTE 292


>sp|Q5BJJ5|HDHD2_DANRE Haloacid dehalogenase-like hydrolase
           domain-containing protein 2 OS=Danio rerio GN=hdhd2 PE=2
           SV=1
          Length = 262

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
 Frame = -2

Query: 415 PAEVMMIGDSAKDDIACGNRAGAVTCLLDLTGRY---DDRQLSP 293
           P E +MIGD A+DD+     AG +  L+  TG+Y   D+ +++P
Sbjct: 196 PEEAVMIGDDARDDVGGAQNAGMLGILVK-TGKYRPADEGKINP 238


>sp|O06480|YFNB_BACSU Putative HAD-hydrolase yfnB OS=Bacillus
           subtilis GN=yfnB PE=1 SV=1
          Length = 235

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = -2

Query: 403 MMIGDSAKDDIACGNRAGAVTCLLDLTGRYDDRQLSPDEQPNYRVKTLEEVQDI 242
           ++IGDS   DI  G  AG  TC ++     D +   P+  P Y ++ LEE+  I
Sbjct: 177 LIIGDSLTADIKGGQLAGLDTCWMN----PDMKPNVPEIIPTYEIRKLEELYHI 226


>sp|Q8VD52|PLPP_RAT Pyridoxal phosphate phosphatase OS=Rattus
           norvegicus GN=Pdxp PE=1 SV=2
          Length = 309

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = -2

Query: 415 PAEVMMIGDSAKDDIACGNRAGAVTCLLDLTG 320
           PA ++M+GD  + DI  G+R G +T +L LTG
Sbjct: 226 PARMLMVGDRLETDILFGHRCG-MTTVLTLTG 256


>sp|P60487|PLPP_MOUSE Pyridoxal phosphate phosphatase OS=Mus
           musculus GN=Pdxp PE=1 SV=1
          Length = 292

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -2

Query: 415 PAEVMMIGDSAKDDIACGNRAGAVTCLLDLTG 320
           PA  +M+GD  + DI  G+R G +T +L LTG
Sbjct: 226 PARTLMVGDRLETDILFGHRCG-MTTVLTLTG 256


>sp|P94512|YSAA_BACSU Putative uncharacterized hydrolase ysaA
           OS=Bacillus subtilis GN=ysaA PE=3 SV=1
          Length = 260

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = -2

Query: 409 EVMMIGDSAKDDIACGNRAGAVTCLLDLTGRYDDRQLSPDEQPNYRVKTLEEV 251
           + +M+GD+   DI   +RAG  T  ++ T    D++   D +P+Y + +L ++
Sbjct: 206 DAIMVGDNLNTDILGASRAGIKTVWINRT----DKKNETDVKPDYIISSLHDL 254


>sp|Q7Q3N5|PORCN_ANOGA Probable protein-cysteine
           N-palmitoyltransferase porcupine OS=Anopheles gambiae
           GN=por PE=3 SV=1
          Length = 495

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +2

Query: 299 KLPVIISSCKIQ*TCDSSCTV--ATSYIVFCTISN 397
           KL  I S+C +   C SSCTV    S  VFCT+ N
Sbjct: 402 KLATIYSACVLVGKCPSSCTVHQHKSNSVFCTVIN 436
tr_hit_id A9RGD9
Definition tr|A9RGD9|A9RGD9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 58
Score (bit) 73.9
E-value 4.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914292|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_C06.
         (419 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RGD9|A9RGD9_PHYPA Predicted protein OS=Physcomitrella paten...    74   4e-12
tr|Q93Z44|Q93Z44_ARATH F25I18.1/F25I18.1 (Expressed protein) OS=...    71   3e-11
tr|Q8RYE9|Q8RYE9_ARATH Putative uncharacterized protein At2g3325...    71   3e-11
tr|A9RSL1|A9RSL1_PHYPA Predicted protein OS=Physcomitrella paten...    71   3e-11
tr|B6UHU7|B6UHU7_MAIZE Catalytic/ hydrolase/ phosphoglycolate ph...    69   2e-10
tr|B4FXA2|B4FXA2_MAIZE Putative uncharacterized protein OS=Zea m...    69   2e-10
tr|A2XB02|A2XB02_ORYSI Putative uncharacterized protein OS=Oryza...    68   3e-10
tr|Q6K6B4|Q6K6B4_ORYSJ Haloacid dehalogenase-like hydrolase-like...    66   8e-10
tr|Q0DWG5|Q0DWG5_ORYSJ Os02g0816100 protein OS=Oryza sativa subs...    66   8e-10
tr|A7NXL4|A7NXL4_VITVI Chromosome chr5 scaffold_2, whole genome ...    66   8e-10
tr|B7FIE3|B7FIE3_MEDTR Putative uncharacterized protein OS=Medic...    66   1e-09
tr|Q56YT8|Q56YT8_ARATH Putative uncharacterized protein At2g3325...    65   2e-09
tr|Q014M1|Q014M1_OSTTA Haloacid dehalogenase-like hydrolase-like...    48   3e-04
tr|A4S0M7|A4S0M7_OSTLU Predicted protein OS=Ostreococcus lucimar...    47   5e-04
tr|A8IWG3|A8IWG3_CHLRE Predicted protein (Fragment) OS=Chlamydom...    46   0.001
tr|Q87JN1|Q87JN1_VIBPA Putative uncharacterized protein VPA0217 ...    44   0.005
tr|Q1VCS5|Q1VCS5_VIBAL Nucleotidase OS=Vibrio alginolyticus 12G0...    44   0.005
tr|A7JX35|A7JX35_PASHA Possible HAD superfamily haloacid dehalog...    42   0.020
tr|Q3IFY7|Q3IFY7_PSEHT Putative enzyme with a phosphatase-like d...    41   0.026
tr|A7N6Z1|A7N6Z1_VIBHB Putative uncharacterized protein OS=Vibri...    41   0.026
tr|A6AK65|A6AK65_VIBHA HAD superfamily (Subfamily IA) hydrolase ...    41   0.026
tr|A7JZ62|A7JZ62_9VIBR HAD superfamily (Subfamily IA) hydrolase ...    40   0.044
tr|A6THY9|A6THY9_KLEP7 Nucleotidase OS=Klebsiella pneumoniae sub...    40   0.058
tr|B7G444|B7G444_PHATR Predicted protein (Fragment) OS=Phaeodact...    40   0.058
tr|B3R107|B3R107_CUPTR D,D-heptose 1,7-bisphosphate phosphatase ...    40   0.075
tr|A0Y516|A0Y516_9GAMM Nucleotidase OS=Alteromonadales bacterium...    40   0.075
tr|A7MGA4|A7MGA4_ENTS8 Putative uncharacterized protein OS=Enter...    39   0.098
tr|Q2C1N8|Q2C1N8_9GAMM Nucleotidase OS=Photobacterium sp. SKA34 ...    39   0.098
tr|B4AM97|B4AM97_BACPU YsaA OS=Bacillus pumilus ATCC 7061 GN=BAT...    39   0.098
tr|A6LYF9|A6LYF9_CLOB8 HAD-superfamily hydrolase, subfamily IA, ...    39   0.13 

>tr|A9RGD9|A9RGD9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_174601 PE=4 SV=1
          Length = 240

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 32/58 (55%), Positives = 45/58 (77%)
 Frame = -2

Query: 415 PAEVMMIGDSAKDDIACGNRAGAVTCLLDLTGRYDDRQLSPDEQPNYRVKTLEEVQDI 242
           P EVMM+GDSA DDI CGNRA A+TCLLD +GRY   +L+ +++P +R++ L E++ I
Sbjct: 164 PHEVMMVGDSAADDIVCGNRADAMTCLLDESGRYQSNELADEQKPTHRIQRLFELKSI 221


>tr|Q93Z44|Q93Z44_ARATH F25I18.1/F25I18.1 (Expressed protein)
           OS=Arabidopsis thaliana GN=At2g33255 PE=2 SV=1
          Length = 224

 Score = 70.9 bits (172), Expect = 3e-11
 Identities = 36/61 (59%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
 Frame = -2

Query: 418 RPAEVMMIGDSAKDDIACGNRAGAVTCLLDLTGRY--DDRQLSPDEQPNYRVKTLEEVQD 245
           +P EVMM+GDS KDDIACG RAGA TCLLD TGRY  DD  +S   QP+++V +L ++Q+
Sbjct: 156 QPNEVMMVGDSLKDDIACGKRAGAFTCLLDETGRYGPDDFSVS-GLQPDFKVDSLSKIQN 214

Query: 244 I 242
           +
Sbjct: 215 L 215


>tr|Q8RYE9|Q8RYE9_ARATH Putative uncharacterized protein At2g33255
           OS=Arabidopsis thaliana GN=At2g33255 PE=4 SV=1
          Length = 245

 Score = 70.9 bits (172), Expect = 3e-11
 Identities = 36/61 (59%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
 Frame = -2

Query: 418 RPAEVMMIGDSAKDDIACGNRAGAVTCLLDLTGRY--DDRQLSPDEQPNYRVKTLEEVQD 245
           +P EVMM+GDS KDDIACG RAGA TCLLD TGRY  DD  +S   QP+++V +L ++Q+
Sbjct: 177 QPNEVMMVGDSLKDDIACGKRAGAFTCLLDETGRYGPDDFSVS-GLQPDFKVDSLSKIQN 235

Query: 244 I 242
           +
Sbjct: 236 L 236


>tr|A9RSL1|A9RSL1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_177750 PE=4 SV=1
          Length = 243

 Score = 70.9 bits (172), Expect = 3e-11
 Identities = 29/58 (50%), Positives = 44/58 (75%)
 Frame = -2

Query: 415 PAEVMMIGDSAKDDIACGNRAGAVTCLLDLTGRYDDRQLSPDEQPNYRVKTLEEVQDI 242
           P++VMM+GDSA DDI CGNRAGA+TCLLD +GRY+   L  ++ P +++++  ++  I
Sbjct: 174 PSQVMMVGDSASDDIVCGNRAGALTCLLDESGRYETGSLPDEQTPTHKIQSFYDIISI 231


>tr|B6UHU7|B6UHU7_MAIZE Catalytic/ hydrolase/ phosphoglycolate
           phosphatase OS=Zea mays PE=2 SV=1
          Length = 273

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = -2

Query: 415 PAEVMMIGDSAKDDIACGNRAGAVTCLLDLTGRYDDRQLSPDE-QPNYRVKTLEEV 251
           P EV+M+GDS KDD+ CG RAGA TCLLD TGRY      P+E +P+++V +L EV
Sbjct: 199 PHEVIMVGDSLKDDVVCGKRAGAFTCLLDETGRYGPHDSLPEEVKPDFKVSSLTEV 254


>tr|B4FXA2|B4FXA2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 271

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = -2

Query: 415 PAEVMMIGDSAKDDIACGNRAGAVTCLLDLTGRYDDRQLSPDE-QPNYRVKTLEEV 251
           P EV+M+GDS KDD+ CG RAGA TCLLD TGRY      P+E +P+++V +L EV
Sbjct: 197 PHEVIMVGDSLKDDVVCGKRAGAFTCLLDETGRYGPHDSLPEEVKPDFKVSSLTEV 252


>tr|A2XB02|A2XB02_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_09435 PE=4 SV=1
          Length = 231

 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 32/56 (57%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -2

Query: 415 PAEVMMIGDSAKDDIACGNRAGAVTCLLDLTGRYDDRQLSP-DEQPNYRVKTLEEV 251
           P EV+M+GDS KDD+ CG RAGA TCLLD TGRY      P D +P+++V +L EV
Sbjct: 157 PNEVVMVGDSLKDDVVCGKRAGAFTCLLDETGRYGPHDSLPEDVRPDFKVSSLSEV 212


>tr|Q6K6B4|Q6K6B4_ORYSJ Haloacid dehalogenase-like hydrolase-like
           (Putative uncharacterized protein) OS=Oryza sativa
           subsp. japonica GN=P0643F09.13 PE=4 SV=1
          Length = 231

 Score = 66.2 bits (160), Expect = 8e-10
 Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -2

Query: 415 PAEVMMIGDSAKDDIACGNRAGAVTCLLDLTGRYDDRQLSPD-EQPNYRVKTLEEV 251
           P EV+M+GDS KDD+ CG RAGA TCLLD TGRY      P+  +P+++V +L EV
Sbjct: 157 PNEVVMVGDSLKDDVVCGKRAGAFTCLLDETGRYGPHDSLPEGVRPDFKVSSLSEV 212


>tr|Q0DWG5|Q0DWG5_ORYSJ Os02g0816100 protein OS=Oryza sativa subsp.
           japonica GN=Os02g0816100 PE=2 SV=1
          Length = 258

 Score = 66.2 bits (160), Expect = 8e-10
 Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -2

Query: 415 PAEVMMIGDSAKDDIACGNRAGAVTCLLDLTGRYDDRQLSPD-EQPNYRVKTLEEV 251
           P EV+M+GDS KDD+ CG RAGA TCLLD TGRY      P+  +P+++V +L EV
Sbjct: 184 PNEVVMVGDSLKDDVVCGKRAGAFTCLLDETGRYGPHDSLPEGVRPDFKVSSLSEV 239


>tr|A7NXL4|A7NXL4_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020381001
           PE=4 SV=1
          Length = 253

 Score = 66.2 bits (160), Expect = 8e-10
 Identities = 29/60 (48%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
 Frame = -2

Query: 418 RPAEVMMIGDSAKDDIACGNRAGAVTCLLDLTGRY-DDRQLSPDEQPNYRVKTLEEVQDI 242
           +P EV+M+GDS KDD+ CG +AG+ TCLLD TG+Y  D   S + +PN++V +L ++Q +
Sbjct: 185 QPYEVIMVGDSLKDDVGCGKQAGSFTCLLDETGKYSSDDMASAELKPNFKVSSLTQLQSL 244