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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914296
Clone id YMU001_000057_C10
Library
Length 487
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000057_C10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AAAAATAAAGCTTCTTTTCCAAGGCCTCCCTATGAAATCATAGTTTCATGTAACCTATAT
CCAAATTGTAAATTGTGTAATACAAAAGTTCTCTTAAAATGACCATGCAAACACCACGGT
TCTTCTAACAGTCATCATAGGACCATAATCTAGCATGTTGCCCCCAAAAAAGCATTTGGA
TATGCCTTTGAGCATAGAGATTTGATCAAATCATGAAAGGAGTAGGAAATGGAGCGAGTT
CGCCATCGCCAAAGCAAATTTCGAGAGAGTTTCTTTGTAACTCCTTCACCTAATTGCCAC
CAACTTCCAGCTCTGCCATTACCAACTTCTAGCTTCCCCCTCTTCCTCTGTTAACCAATG
GTCACCATACACAAGTCACCACCAGCACCACCAAATTTCAATCTTATTCTATGAGGCCTA
ATTAGTGAAGCATTCAGAAAGATTACAGTAATAATCATCCTAATTAGTGAAGCATTCATA
AAGATTA
■■Homology search results ■■ -
sp_hit_id Q6D108
Definition sp|Q6D108|LPLT_ERWCT Lysophospholipid transporter lplT OS=Erwinia carotovora subsp. atroseptica
Align length 61
Score (bit) 30.0
E-value 5.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914296|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_C10.
         (487 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6D108|LPLT_ERWCT Lysophospholipid transporter lplT OS=Erwini...    30   5.7  
sp|Q18439|NAS8_CAEEL Zinc metalloproteinase nas-8 OS=Caenorhabdi...    30   7.5  
sp|A9MRL9|LPLT_SALAR Lysophospholipid transporter lplT OS=Salmon...    30   7.5  
sp|Q66D85|ZITB_YERPS Zinc transporter zitB OS=Yersinia pseudotub...    30   7.6  
sp|Q8ZGY6|ZITB_YERPE Zinc transporter zitB OS=Yersinia pestis GN...    30   7.6  
sp|Q7ME99|Y4771_VIBVY Putative reductase VVA0771 OS=Vibrio vulni...    29   9.8  
sp|Q8D795|Y4265_VIBVU Putative reductase VV2_0265 OS=Vibrio vuln...    29   9.8  
sp|Q9V4P1|ANLN_DROME Actin-binding protein anillin OS=Drosophila...    29   9.9  

>sp|Q6D108|LPLT_ERWCT Lysophospholipid transporter lplT OS=Erwinia
           carotovora subsp. atroseptica GN=lplT PE=3 SV=1
          Length = 407

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = -3

Query: 467 LIRMIITVIFLNASLIRPHRIRLKFGGAGGDLCMVTIG*QRKRGKLEVGNGRAGSWWQLG 288
           LI +++ +  L  +L+  + + +  G  GG   +      ++RGK  VG G A +   LG
Sbjct: 291 LIGVVVVIFTLQHNLLSAYSLLILLGALGGFFIVPLNALLQERGKASVGAGNAIAVQNLG 350

Query: 287 E 285
           E
Sbjct: 351 E 351


>sp|Q18439|NAS8_CAEEL Zinc metalloproteinase nas-8 OS=Caenorhabditis
           elegans GN=nas-8 PE=2 SV=3
          Length = 403

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 260 NLLWRWRTRSISYSFHDLIKSLCS 189
           NL WRW  R  S+ F  ++K  CS
Sbjct: 343 NLCWRWIDRCKSFFFEQIMKEFCS 366


>sp|A9MRL9|LPLT_SALAR Lysophospholipid transporter lplT
           OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86
           / RSK2980) GN=lplT PE=3 SV=1
          Length = 398

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 21/71 (29%), Positives = 33/71 (46%)
 Frame = -3

Query: 467 LIRMIITVIFLNASLIRPHRIRLKFGGAGGDLCMVTIG*QRKRGKLEVGNGRAGSWWQLG 288
           LI +++ +  L  +L+  + + L  G  GG   +      ++RGK  VG G A +   LG
Sbjct: 291 LIGVVVAMFSLQHALLPAYALLLLIGILGGFFVVPLNALLQERGKKSVGAGNAIAVQNLG 350

Query: 287 EGVTKKLSRNL 255
           E  T  L   L
Sbjct: 351 ENSTMLLMLGL 361


>sp|Q66D85|ZITB_YERPS Zinc transporter zitB OS=Yersinia
           pseudotuberculosis GN=zitB PE=3 SV=1
          Length = 312

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
 Frame = +2

Query: 254 ANFERVSL*LLHLIATNFQLCH------YQLLASPSSSVNQWSPYTSHHQHH 391
           A  +R+   LLH    ++++ H      YQ   +P   +NQ +P   HH+HH
Sbjct: 262 ALLQRIQDYLLH----HYRISHATVQMEYQHCGTPDCGINQAAPADGHHRHH 309


>sp|Q8ZGY6|ZITB_YERPE Zinc transporter zitB OS=Yersinia pestis
           GN=zitB PE=3 SV=1
          Length = 312

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
 Frame = +2

Query: 254 ANFERVSL*LLHLIATNFQLCH------YQLLASPSSSVNQWSPYTSHHQHH 391
           A  +R+   LLH    ++++ H      YQ   +P   +NQ +P   HH+HH
Sbjct: 262 ALLQRIQDYLLH----HYRISHATVQMEYQHCGTPDCGINQAAPADGHHRHH 309


>sp|Q7ME99|Y4771_VIBVY Putative reductase VVA0771 OS=Vibrio
           vulnificus (strain YJ016) GN=VVA0771 PE=3 SV=1
          Length = 400

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 19/38 (50%), Positives = 21/38 (55%)
 Frame = -3

Query: 410 RIRLKFGGAGGDLCMVTIG*QRKRGKLEVGNGRAGSWW 297
           RI L FGGA  D    TIG   +RG  E G G AG W+
Sbjct: 58  RIALTFGGAQAD----TIGVSFERGPSEKGTGSAG-WY 90


>sp|Q8D795|Y4265_VIBVU Putative reductase VV2_0265 OS=Vibrio
           vulnificus GN=VV2_0265 PE=3 SV=1
          Length = 400

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 19/38 (50%), Positives = 21/38 (55%)
 Frame = -3

Query: 410 RIRLKFGGAGGDLCMVTIG*QRKRGKLEVGNGRAGSWW 297
           RI L FGGA  D    TIG   +RG  E G G AG W+
Sbjct: 58  RIALTFGGAQAD----TIGVSFERGPSEKGTGSAG-WY 90


>sp|Q9V4P1|ANLN_DROME Actin-binding protein anillin OS=Drosophila
           melanogaster GN=scra PE=1 SV=3
          Length = 1239

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +2

Query: 329 LASPSSSVNQWSPYTSHHQHHQI 397
           LA+ + ++NQW   TSHH+ H++
Sbjct: 206 LAALADTINQWEDDTSHHEVHRL 228
tr_hit_id B0WG37
Definition tr|B0WG37|B0WG37_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus
Align length 63
Score (bit) 36.6
E-value 0.65
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914296|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_C10.
         (487 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0WG37|B0WG37_CULQU Putative uncharacterized protein OS=Culex...    37   0.65 
tr|Q7Q2Z6|Q7Q2Z6_ANOGA AGAP011410-PA (Fragment) OS=Anopheles gam...    33   9.3  

>tr|B0WG37|B0WG37_CULQU Putative uncharacterized protein OS=Culex
           quinquefasciatus GN=CpipJ_CPIJ005846 PE=4 SV=1
          Length = 672

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
 Frame = +2

Query: 221 SRKWSEFAIAKANFERVSL*LLHLIATNFQL-----CHYQLLASPSS-SVNQWSPYTSHH 382
           S+KW++     A+F+ VS        TNF L      HYQ++ASP    V Q +  T+HH
Sbjct: 95  SQKWNKLRRRCASFKTVSGPASLDSDTNFILGEHPAAHYQIIASPGPVQVQQTTTTTTHH 154

Query: 383 QHH 391
            HH
Sbjct: 155 HHH 157


>tr|Q7Q2Z6|Q7Q2Z6_ANOGA AGAP011410-PA (Fragment) OS=Anopheles
           gambiae GN=AGAP011410 PE=4 SV=4
          Length = 806

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +1

Query: 7   KASFPRPPYEIIVSCNLYPNCKLCNTKVLLK*PCKHHGSSNSHHRTII*HVAPKK 171
           K+ F R  +E+  S N++P C +C+         +HHG  +S +R     + PK+
Sbjct: 66  KSQFARSTHELAHSGNMFP-CSVCDKSYRYNRDLRHHGRVHSENRPYACSLCPKQ 119