BP914297
Clone id YMU001_000057_C11
Library
Length 260
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000057_C11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGCCTTACTACAATGGGTAAACGTTTATTCTCCTCAAGTATGCATATTCACACCATCAGC
AACATGCAAGAAGATGACTTTCCTATATCGAATGGGCTCTTGCTTTCTCTGCTCTTCATT
ACCCAAGAAAACTTTCCTGCTCAGTTTTGCAACTTCATGTGTTGTTCGGTTTTTAAAGAT
CAAAAACATTTTGCTCACAGCCTCTGGGCCAGTAGCTTCAAAATGATCTACTTGCATGTG
TGTTGTACTGTATTCTTGGC
■■Homology search results ■■ -
sp_hit_id A1USJ3
Definition sp|A1USJ3|Y642_BARBK UPF0161 protein BARBAKC583_0642 OS=Bartonella bacilliformis (strain ATCC 35685 / KC583)
Align length 53
Score (bit) 34.7
E-value 0.15
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914297|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_C11.
(260 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A1USJ3|Y642_BARBK UPF0161 protein BARBAKC583_0642 OS=Bartonel... 35 0.15
sp|O46510|EPB42_BOVIN Erythrocyte membrane protein band 4.2 OS=B... 29 6.3
sp|Q9S9M3|WAKLC_ARATH Wall-associated receptor kinase-like 3 OS=... 29 8.2
sp|P40757|ALN_RANCA Allantoinase, mitochondrial OS=Rana catesbei... 29 8.2

>sp|A1USJ3|Y642_BARBK UPF0161 protein BARBAKC583_0642 OS=Bartonella
bacilliformis (strain ATCC 35685 / KC583)
GN=BARBAKC583_0642 PE=3 SV=1
Length = 117

Score = 34.7 bits (78), Expect = 0.15
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1

Query: 100 LLSLLFITQENFPAQFCNFM-CCSVFKDQKHFAHSLWASSFKMIYLHVCCTVF 255
L+ L IT NF C +M CS + + H LWA ++ ++ VCC F
Sbjct: 32 LIRLYQITLSNFIGNQCRYMPTCSEYTYEAIARHGLWAGAWMGLFRIVCCNPF 84


>sp|O46510|EPB42_BOVIN Erythrocyte membrane protein band 4.2 OS=Bos
taurus GN=EPB42 PE=2 SV=3
Length = 687

Score = 29.3 bits (64), Expect = 6.3
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -3

Query: 132 VFLGNEEQRKQEPIRYRKVIFLHVAD 55
VFLGNE QRK+ + +IFL AD
Sbjct: 146 VFLGNEAQRKEYLLNQNGLIFLGTAD 171


>sp|Q9S9M3|WAKLC_ARATH Wall-associated receptor kinase-like 3
OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2
Length = 730

Score = 28.9 bits (63), Expect = 8.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2

Query: 14 WVNVYSPQVCIFTPSATCKKMTFLYRMGSCFLCSSLPKKTF 136
++N + VC T S +CK + FL R+ + SLPK F
Sbjct: 58 YLNSWYEVVCNSTTSGSCKTVPFLTRINREVVNISLPKSDF 98


>sp|P40757|ALN_RANCA Allantoinase, mitochondrial OS=Rana catesbeiana
GN=ALN PE=1 SV=1
Length = 484

Score = 28.9 bits (63), Expect = 8.2
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2

Query: 8 LQWVNVYSPQVCIFTPSATCKKMTFLYRMGSCFLCSSLPK-KTFLLSF 148
L+WV + I T S CKKM F+ R+ S + S K K++LL F
Sbjct: 392 LKWVMMLIWSSGILTKSFRCKKMIFITRISSPHIWDSFFKEKSWLLLF 439


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914297|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_C11.
(260 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******