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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914300
Clone id YMU001_000057_D02
Library
Length 425
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000057_D02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CACGAAAAGCATTTGAAGTCGATGAAGAGAAGCTTGCTTTGGATTAGCAGGCCATGTTGA
ATGCTTTCATGTTGCTGTACATGTGCCGGTTCAATACCTTGGAAAGCAAAGCACGAGTGC
TCTTTGTCTCATTTCACATAGAAGAAGAAGAGTGGTGGCTACGGATAGCTCTATTATACA
ACTTGCACAAGGTTGAGGGTCTGATAAGCTGTGTATATAAAGAAGTGGTTCTGTTGGAAT
GTTGAATTACCTAGTCTACACGAAGTCTACCACTTGCAGTACTTCAACAAGTCAGAAAGG
TCATTTGTGTATGTTTAGTTTAAGTTTTGACTTCTAAATTCGTCTCAAAAATAGCCGACA
GGAACAAGAAGAGGCCAAAAAGAAGAGGAACTGTGCCTAGTAGCAAACCCAGAGGCTATG
CTTTG
■■Homology search results ■■ -
sp_hit_id Q06604
Definition sp|Q06604|BSP1_YEAST Protein BSP1 OS=Saccharomyces cerevisiae
Align length 29
Score (bit) 28.9
E-value 8.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914300|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_D02.
         (425 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q06604|BSP1_YEAST Protein BSP1 OS=Saccharomyces cerevisiae GN...    29   8.8  

>sp|Q06604|BSP1_YEAST Protein BSP1 OS=Saccharomyces cerevisiae
           GN=BSP1 PE=1 SV=1
          Length = 576

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +3

Query: 339 FVSKIADRNKKRPKRRGTVPSSKPRGYAL 425
           F+SK+ D N KR      +PSSKP G AL
Sbjct: 13  FLSKVEDLNSKR---YSNIPSSKPAGEAL 38
tr_hit_id Q4Y3B1
Definition tr|Q4Y3B1|Q4Y3B1_PLACH Putative uncharacterized protein (Fragment) OS=Plasmodium chabaudi
Align length 43
Score (bit) 33.1
E-value 7.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914300|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_D02.
         (425 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4Y3B1|Q4Y3B1_PLACH Putative uncharacterized protein (Fragmen...    33   7.0  

>tr|Q4Y3B1|Q4Y3B1_PLACH Putative uncharacterized protein (Fragment)
            OS=Plasmodium chabaudi GN=PC000437.01.0 PE=4 SV=1
          Length = 1136

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = -2

Query: 190  LCKLYNRAIRSHHSSSSM*NETKSTRALLSKVLNRHMYSNMKA 62
            +CK+YN  + S +  S+  ++T  T+ L   + N H++ N  A
Sbjct: 976  ICKIYNELLSSSNKQSNFHSQTDKTKQLDKDINNAHLHKNSNA 1018