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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914301
Clone id YMU001_000057_D04
Library
Length 544
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000057_D04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AAAGTATTCATCGAGGCAAGCATTTTTTCTATTTTCTTCGTCCCATATCTCTTACATAAT
TCCTCGGGCCTCAATGCCTTCTTCCAACTTCTAGTATTGTCAATTTTTATTTGAATCCTT
CTAGTGGCCCCTTGGATAGTTAATGTATGATTTACTTGATCATGTATAGAACTAGGAAAT
TTGAGACAAGGTCTGCCTCTAACAGCATACCATATGCTCCTTGCACGTCCAATACTAGAA
AGATGGTATTAAATTTCTCCTTGCCTAATTTGATTTTCCACTAGTCTAGTAGCTTGAACC
ACTCAGTGATCAACCATCCTCACTGTGAATGGTGCTACTTTTAAATATGTGACTCCCATA
TTTTGCCTGAGATGTTCCCCTAGGATAATTACACCAACACCACCATCCAATATAGTTCCT
AACAGTGGTTCCCACTGCTTTAGTTTTGGCCTCAAATTTTCTCTTGTGTCTAATGAGCTT
TGCAACTGCTAGTAATGTCCGCCTAATGTCATCGAGTTTGATTGTTAACTTTTGTATTCT
TTCA
■■Homology search results ■■ -
sp_hit_id P40536
Definition sp|P40536|YID2_YEAST Putative uncharacterized protein YIL032C OS=Saccharomyces cerevisiae
Align length 27
Score (bit) 30.0
E-value 7.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914301|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_D04.
         (544 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P40536|YID2_YEAST Putative uncharacterized protein YIL032C OS...    30   7.6  
sp|Q21045|YB70_CAEEL Uncharacterized protein F59F5.2 OS=Caenorha...    30   7.6  

>sp|P40536|YID2_YEAST Putative uncharacterized protein YIL032C
           OS=Saccharomyces cerevisiae GN=YIL032C PE=5 SV=1
          Length = 118

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 398 HHHPI*FLTVVPTALVLASNFLLCLMS 478
           +HHP  FL V+P   VL  N L+ L S
Sbjct: 80  NHHPSFFLRVIPATFVLPDNILIILCS 106


>sp|Q21045|YB70_CAEEL Uncharacterized protein F59F5.2
           OS=Caenorhabditis elegans GN=F59F5.2 PE=2 SV=2
          Length = 179

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = +3

Query: 171 TRKFETRSASNSIPYAPCTSNTRKMVLNFSLPNLIFH*SSSLNHSVI 311
           +RK +  SAS+ +  + CT      + +F  PN++F+ SS ++H ++
Sbjct: 36  SRKSDLDSASSGVGSSTCTEEQESSLDHFKKPNVVFN-SSEISHILL 81
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914301|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_D04.
         (544 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******