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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914307
Clone id YMU001_000057_D12
Library
Length 595
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000057_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTTTTTTTTTTTTTTTGAGCCTTAGGTTAACAAGATTTTCACTATCAAATAATCT
CAACAAATTACCAGCAGTTAACCCATAAAGTTTCTGCAAAGACACTGATCTCCATAAATA
CACATGAGCCACTCTTTACAAAAATTGCATTGATTGCCAGAAGATAATGGATACTTCAAC
AAGTCGGCTTTGATACTGCAGCTGAAGTGAACAGCATTGTTGAGGTCCCAGATCACTTCC
ATACCTACACCTTGTTTCAACAGATAGCATCAAAAAAACCCAGTCCAAAAAGCATCCATC
ATGTATGGAAATTCCTCTGGAAATCCACACCTCAGGTACAATAAACAACATATTGTTGTG
CTGTTGACTATACACAAAGTTTCCTTGCACAATCATGATGTCCCAATTGCATAAAAGTGC
ATCATTTTGTACAGATGGAAACTTTGAAAGATCTTCTCGAGAAGCGTCCTCTATTCAAAT
TCTGTAGCTCAATCAGAACCAGCTGGTCGACCATCTGGGAGCTCCTTTACTGTACGGGGT
TAAGCTGACTGAACTAATCCCTTCATATGCATCACTTCATATTGCTGTGGTACAA
■■Homology search results ■■ -
sp_hit_id Q81W47
Definition sp|Q81W47|Y4135_BACAN UPF0348 protein BA_4135/GBAA4135/BAS3837 OS=Bacillus anthracis
Align length 81
Score (bit) 32.7
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914307|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_D12.
         (574 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q81W47|Y4135_BACAN UPF0348 protein BA_4135/GBAA4135/BAS3837 O...    33   1.3  
sp|Q6HEN9|Y3667_BACHK UPF0348 protein BT9727_3667 OS=Bacillus th...    33   1.3  
sp|Q732E3|Y3971_BACC1 UPF0348 protein BCE_3971 OS=Bacillus cereu...    30   8.6  
sp|Q636A1|Y3684_BACCZ UPF0348 protein BCE33L3684 OS=Bacillus cer...    30   8.6  

>sp|Q81W47|Y4135_BACAN UPF0348 protein BA_4135/GBAA4135/BAS3837
           OS=Bacillus anthracis GN=BA_4135 PE=3 SV=1
          Length = 393

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 22/81 (27%), Positives = 35/81 (43%)
 Frame = +2

Query: 68  SFCKDTDLHKYT*ATLYKNCIDCQKIMDTSTSRL*YCS*SEQHC*GPRSLPYLHLVSTDS 247
           SF +     +YT   L + C     I+  +T    YC+  EQH       PY+ L+    
Sbjct: 272 SFMESLKTKRYTWTRLQRACTH---ILTNTTKEEIYCANIEQHA------PYIRLLGMSQ 322

Query: 248 IKKTQSKKHPSCMEIPLEIHT 310
             +T   K+   +E+P+  HT
Sbjct: 323 KGQTYLSKNKKKIELPILTHT 343


>sp|Q6HEN9|Y3667_BACHK UPF0348 protein BT9727_3667 OS=Bacillus
           thuringiensis subsp. konkukian GN=BT9727_3667 PE=3 SV=1
          Length = 393

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 22/81 (27%), Positives = 35/81 (43%)
 Frame = +2

Query: 68  SFCKDTDLHKYT*ATLYKNCIDCQKIMDTSTSRL*YCS*SEQHC*GPRSLPYLHLVSTDS 247
           SF +     +YT   L + C     I+  +T    YC+  EQH       PY+ L+    
Sbjct: 272 SFMESLKTKRYTWTRLQRACTH---ILTNTTKEEIYCANIEQHA------PYIRLLGMSQ 322

Query: 248 IKKTQSKKHPSCMEIPLEIHT 310
             +T   K+   +E+P+  HT
Sbjct: 323 KGQTYLSKNKKKIELPILTHT 343


>sp|Q732E3|Y3971_BACC1 UPF0348 protein BCE_3971 OS=Bacillus cereus
           (strain ATCC 10987) GN=BCE_3971 PE=3 SV=1
          Length = 393

 Score = 30.0 bits (66), Expect = 8.6
 Identities = 21/81 (25%), Positives = 35/81 (43%)
 Frame = +2

Query: 68  SFCKDTDLHKYT*ATLYKNCIDCQKIMDTSTSRL*YCS*SEQHC*GPRSLPYLHLVSTDS 247
           SF +     +YT   L + C     I+  +T    +C+  EQH       PY+ L+    
Sbjct: 272 SFMEALKTKRYTWTRLQRACTH---ILTNTTKEEIHCANIEQHA------PYIRLLGMSQ 322

Query: 248 IKKTQSKKHPSCMEIPLEIHT 310
             +T   K+   +E+P+  HT
Sbjct: 323 KGQTYLSKNKKKIELPILTHT 343


>sp|Q636A1|Y3684_BACCZ UPF0348 protein BCE33L3684 OS=Bacillus cereus
           (strain ZK / E33L) GN=BCE33L3684 PE=3 SV=1
          Length = 393

 Score = 30.0 bits (66), Expect = 8.6
 Identities = 21/81 (25%), Positives = 35/81 (43%)
 Frame = +2

Query: 68  SFCKDTDLHKYT*ATLYKNCIDCQKIMDTSTSRL*YCS*SEQHC*GPRSLPYLHLVSTDS 247
           SF +     +YT   L + C     I+  +T    +C+  EQH       PY+ L+    
Sbjct: 272 SFMEALKTKRYTWTRLQRACTH---ILTNTTKEEIHCANIEQHA------PYIRLLGMSQ 322

Query: 248 IKKTQSKKHPSCMEIPLEIHT 310
             +T   K+   +E+P+  HT
Sbjct: 323 KGQTYLSKNKKKIELPILTHT 343
tr_hit_id A7SSU1
Definition tr|A7SSU1|A7SSU1_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis
Align length 53
Score (bit) 34.7
E-value 3.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914307|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_D12.
         (574 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7SSU1|A7SSU1_NEMVE Predicted protein (Fragment) OS=Nematoste...    35   3.8  
tr|B6HG71|B6HG71_PENCH Putative uncharacterized protein Pc20g113...    33   8.6  

>tr|A7SSU1|A7SSU1_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g70448 PE=4 SV=1
          Length = 267

 Score = 34.7 bits (78), Expect = 3.8
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = +2

Query: 254 KTQSKKHPSCMEIPLEIHTSGTINNILLCC*LYTKFPCTIMMSQLHKSASFCT 412
           +  S K P C  +  E+H+S ++   + C    +K PCT +  Q+H S S CT
Sbjct: 162 RVHSSKSP-CTRVAREVHSSKSLCTRVACQVHSSKSPCTRVSCQVHSSKSPCT 213


>tr|B6HG71|B6HG71_PENCH Putative uncharacterized protein Pc20g11360
           OS=Penicillium chrysogenum Wisconsin 54-1255
           GN=Pc20g11360 PE=4 SV=1
          Length = 611

 Score = 33.5 bits (75), Expect = 8.6
 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -2

Query: 381 DIMIVQGNFVYSQQH-NNMLFIVPEVWISRGISIHDGCFLDWVFLMLSVETRCRY 220
           D+ +   + + +Q    +M +++ +V  + G+ +H   FLDW F+ L+ E + RY
Sbjct: 397 DLDVADASLIQTQNVVKSMPYVLGKVRFASGLLVHGKRFLDWAFVELTTEAQQRY 451