NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914308
Clone id YMU001_000057_E01
Library
Length 499
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000057_E01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GATATCTTGCAGAAAAGGCAAGAGGAAAGCTCCGCCTACAGAAGATTTACTGCTTTACGT
AATTACAGCTGCAGTGCGGCAGAAAAGGCGGTTGATAATGGAGGAGTGCAGGTGTATGGA
TGATGTTCTCAAGGAATGCGATAGCATGTCAGGGAACTTGGATGTGTGGGCTCTGCTGGA
TGATGCACGTGATCTCGTAGCTTCGTTCCACCACAAGTTACCTGTCTGATCTGAGGTTCA
TACCTCAACAATCTTAATCTTCACAGTTCTTCTCCCACGCAAGTGTTTTAATGCACACGT
GGGTTTAACTGTATTTTGTCTTTCTTTCATGTCTGTACTGCTGTGCTACGCATGCATAGC
TCATCGGCCAATTAGGAGGTGCTTCGATCTGTTGTCCCTCTGTCCTCTTTGACCCCTCGC
AAATGCTTGAAAGGTTTTTGCTTGCAGCTCCACCATCTGGGGCCANGGAGATTTGTACCA
TGCTTACATGAATATGAAT
■■Homology search results ■■ -
sp_hit_id Q9H7Z3
Definition sp|Q9H7Z3|CN102_HUMAN UPF0614 protein C14orf102 OS=Homo sapiens
Align length 38
Score (bit) 30.4
E-value 4.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914308|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_E01.
         (499 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9H7Z3|CN102_HUMAN UPF0614 protein C14orf102 OS=Homo sapiens ...    30   4.8  

>sp|Q9H7Z3|CN102_HUMAN UPF0614 protein C14orf102 OS=Homo sapiens
           GN=C14orf102 PE=1 SV=2
          Length = 1164

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
 Frame = -1

Query: 472 ISXAPDGGAASKNLS-----SICEGSKRTEGQQIEAPP 374
           +S APDGG++ K L      S C GS  +  QQ EA P
Sbjct: 10  LSEAPDGGSSRKELDWLSNPSFCVGSITSLSQQTEAAP 47
tr_hit_id B8LR92
Definition tr|B8LR92|B8LR92_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 70
Score (bit) 95.1
E-value 2.0e-18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914308|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_E01.
         (499 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LR92|B8LR92_PICSI Putative uncharacterized protein OS=Picea...    95   2e-18
tr|A9NVH9|A9NVH9_PICSI Putative uncharacterized protein OS=Picea...    95   2e-18
tr|Q69NG6|Q69NG6_ORYSJ Os09g0528800 protein OS=Oryza sativa subs...    91   3e-17
tr|A3C0V1|A3C0V1_ORYSJ Putative uncharacterized protein OS=Oryza...    91   3e-17
tr|A2Z3C3|A2Z3C3_ORYSI Putative uncharacterized protein OS=Oryza...    91   3e-17
tr|A7QEY2|A7QEY2_VITVI Chromosome chr16 scaffold_86, whole genom...    90   7e-17
tr|Q6Z9D7|Q6Z9D7_ORYSJ Os08g0547200 protein OS=Oryza sativa subs...    88   2e-16
tr|B8B9D2|B8B9D2_ORYSI Putative uncharacterized protein OS=Oryza...    88   2e-16
tr|B4FIM1|B4FIM1_MAIZE Putative uncharacterized protein OS=Zea m...    88   2e-16
tr|A3BVG7|A3BVG7_ORYSJ Putative uncharacterized protein OS=Oryza...    88   2e-16
tr|Q9FIN3|Q9FIN3_ARATH GTPase activator-like protein of Rab-like...    88   3e-16
tr|Q9FHY9|Q9FHY9_ARATH GTPase activator protein of Rab-like smal...    88   3e-16
tr|Q67YN2|Q67YN2_ARATH GTPase activator protein of Rab-like smal...    88   3e-16
tr|Q67XX9|Q67XX9_ARATH GTPase activator like protein of Rab-like...    88   3e-16
tr|Q0WLJ6|Q0WLJ6_ARATH GTPase activator-like protein of Rab-like...    88   3e-16
tr|A7QJ65|A7QJ65_VITVI Chromosome chr2 scaffold_105, whole genom...    87   3e-16
tr|A5ADA4|A5ADA4_VITVI Putative uncharacterized protein OS=Vitis...    87   3e-16
tr|B4FE62|B4FE62_MAIZE Putative uncharacterized protein OS=Zea m...    87   6e-16
tr|Q94HX6|Q94HX6_ORYSA Putative GTPase activating protein OS=Ory...    86   1e-15
tr|Q7XCR7|Q7XCR7_ORYSJ Os10g0518100 protein OS=Oryza sativa subs...    86   1e-15
tr|B8BHW1|B8BHW1_ORYSI Putative uncharacterized protein OS=Oryza...    86   1e-15
tr|Q9SG14|Q9SG14_ARATH Putative GTPase activator protein of Rab-...    86   1e-15
tr|Q4V3B4|Q4V3B4_ARATH At3g49350 (GTPase activating-like protein...    86   1e-15
tr|A3C6I1|A3C6I1_ORYSJ Putative uncharacterized protein OS=Oryza...    86   1e-15
tr|Q9FJC7|Q9FJC7_ARATH GTPase activator protein of Rab-like smal...    75   2e-12
tr|Q94BY9|Q94BY9_ARATH AT5g53570/MNC6_11 OS=Arabidopsis thaliana...    75   2e-12
tr|Q56WX5|Q56WX5_ARATH GTPase activator protein of Rab-like smal...    75   2e-12
tr|A9RYK1|A9RYK1_PHYPA Predicted protein (Fragment) OS=Physcomit...    74   5e-12
tr|A9TX53|A9TX53_PHYPA Predicted protein (Fragment) OS=Physcomit...    64   4e-09
tr|A9P8C7|A9P8C7_POPTR Putative uncharacterized protein OS=Popul...    37   0.39 

>tr|B8LR92|B8LR92_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 455

 Score = 95.1 bits (235), Expect = 2e-18
 Identities = 42/70 (60%), Positives = 59/70 (84%)
 Frame = +2

Query: 11  RKGKRKAPPTEDLLLYVITAAVRQKRRLIMEECRCMDDVLKECDSMSGNLDVWALLDDAR 190
           +KGK++APPT DLLLY I A+V QKR+LI+E+   MDD+L+EC++M+G+LD+W LLDDA 
Sbjct: 386 KKGKQRAPPTSDLLLYAIAASVLQKRKLIIEKYTGMDDILRECNNMAGHLDIWKLLDDAH 445

Query: 191 DLVASFHHKL 220
            LVA+ H+K+
Sbjct: 446 ALVAALHNKI 455


>tr|A9NVH9|A9NVH9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 585

 Score = 95.1 bits (235), Expect = 2e-18
 Identities = 42/70 (60%), Positives = 59/70 (84%)
 Frame = +2

Query: 11  RKGKRKAPPTEDLLLYVITAAVRQKRRLIMEECRCMDDVLKECDSMSGNLDVWALLDDAR 190
           +KGK++APPT DLLLY I A+V QKR+LI+E+   MDD+L+EC++M+G+LD+W LLDDA 
Sbjct: 516 KKGKQRAPPTSDLLLYAIAASVLQKRKLIIEKYTGMDDILRECNNMAGHLDIWKLLDDAH 575

Query: 191 DLVASFHHKL 220
            LVA+ H+K+
Sbjct: 576 ALVAALHNKI 585


>tr|Q69NG6|Q69NG6_ORYSJ Os09g0528800 protein OS=Oryza sativa subsp.
           japonica GN=OJ1531_B07.10 PE=2 SV=1
          Length = 579

 Score = 90.9 bits (224), Expect = 3e-17
 Identities = 41/69 (59%), Positives = 55/69 (79%)
 Frame = +2

Query: 14  KGKRKAPPTEDLLLYVITAAVRQKRRLIMEECRCMDDVLKECDSMSGNLDVWALLDDARD 193
           K + +APPT+DLLLY I A V Q+R+LI+E+   MD++L+EC+SM+G LDVW LLDDA D
Sbjct: 511 KIRLRAPPTDDLLLYAIAACVLQRRKLIIEKYSSMDEILRECNSMAGQLDVWRLLDDAHD 570

Query: 194 LVASFHHKL 220
           LV +FH K+
Sbjct: 571 LVVNFHDKI 579


>tr|A3C0V1|A3C0V1_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_028923 PE=4 SV=1
          Length = 601

 Score = 90.9 bits (224), Expect = 3e-17
 Identities = 41/69 (59%), Positives = 55/69 (79%)
 Frame = +2

Query: 14  KGKRKAPPTEDLLLYVITAAVRQKRRLIMEECRCMDDVLKECDSMSGNLDVWALLDDARD 193
           K + +APPT+DLLLY I A V Q+R+LI+E+   MD++L+EC+SM+G LDVW LLDDA D
Sbjct: 533 KIRLRAPPTDDLLLYAIAACVLQRRKLIIEKYSSMDEILRECNSMAGQLDVWRLLDDAHD 592

Query: 194 LVASFHHKL 220
           LV +FH K+
Sbjct: 593 LVVNFHDKI 601


>tr|A2Z3C3|A2Z3C3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_32124 PE=4 SV=1
          Length = 542

 Score = 90.9 bits (224), Expect = 3e-17
 Identities = 41/69 (59%), Positives = 55/69 (79%)
 Frame = +2

Query: 14  KGKRKAPPTEDLLLYVITAAVRQKRRLIMEECRCMDDVLKECDSMSGNLDVWALLDDARD 193
           K + +APPT+DLLLY I A V Q+R+LI+E+   MD++L+EC+SM+G LDVW LLDDA D
Sbjct: 474 KIRLRAPPTDDLLLYAIAACVLQRRKLIIEKYSSMDEILRECNSMAGQLDVWRLLDDAHD 533

Query: 194 LVASFHHKL 220
           LV +FH K+
Sbjct: 534 LVVNFHDKI 542


>tr|A7QEY2|A7QEY2_VITVI Chromosome chr16 scaffold_86, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00037201001
           PE=4 SV=1
          Length = 513

 Score = 89.7 bits (221), Expect = 7e-17
 Identities = 39/67 (58%), Positives = 56/67 (83%)
 Frame = +2

Query: 20  KRKAPPTEDLLLYVITAAVRQKRRLIMEECRCMDDVLKECDSMSGNLDVWALLDDARDLV 199
           +++APPT+DLLLY I A+V QKR+LI+E+   MD++++EC+SM+G+LDVW LL+DA DLV
Sbjct: 443 RQRAPPTDDLLLYAIAASVLQKRKLIIEKYSSMDEIIRECNSMAGHLDVWKLLNDAHDLV 502

Query: 200 ASFHHKL 220
            S H K+
Sbjct: 503 VSLHDKI 509


>tr|Q6Z9D7|Q6Z9D7_ORYSJ Os08g0547200 protein OS=Oryza sativa subsp.
           japonica GN=P0544G09.9 PE=2 SV=1
          Length = 565

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 40/64 (62%), Positives = 50/64 (78%)
 Frame = +2

Query: 29  APPTEDLLLYVITAAVRQKRRLIMEECRCMDDVLKECDSMSGNLDVWALLDDARDLVASF 208
           APPT+DLLLY I A V QKR+LI+E    MD++L+EC+SM+G LDVW LLDDA DLV + 
Sbjct: 502 APPTDDLLLYAIAACVLQKRKLIIERYSSMDEILRECNSMAGQLDVWRLLDDAHDLVVNL 561

Query: 209 HHKL 220
           H K+
Sbjct: 562 HDKI 565


>tr|B8B9D2|B8B9D2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_30142 PE=4 SV=1
          Length = 563

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 40/64 (62%), Positives = 50/64 (78%)
 Frame = +2

Query: 29  APPTEDLLLYVITAAVRQKRRLIMEECRCMDDVLKECDSMSGNLDVWALLDDARDLVASF 208
           APPT+DLLLY I A V QKR+LI+E    MD++L+EC+SM+G LDVW LLDDA DLV + 
Sbjct: 500 APPTDDLLLYAIAACVLQKRKLIIERYSSMDEILRECNSMAGQLDVWRLLDDAHDLVVNL 559

Query: 209 HHKL 220
           H K+
Sbjct: 560 HDKI 563


>tr|B4FIM1|B4FIM1_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 547

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 39/65 (60%), Positives = 52/65 (80%)
 Frame = +2

Query: 26  KAPPTEDLLLYVITAAVRQKRRLIMEECRCMDDVLKECDSMSGNLDVWALLDDARDLVAS 205
           +APPT+DLLLY I A V Q+R+LI+E+   MD++L+EC+SM+G LDVW LLDDA DLV +
Sbjct: 483 RAPPTDDLLLYAIAACVLQRRKLIIEKYSSMDEILRECNSMAGQLDVWRLLDDAHDLVVN 542

Query: 206 FHHKL 220
            H K+
Sbjct: 543 LHDKI 547


>tr|A3BVG7|A3BVG7_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_027039 PE=4 SV=1
          Length = 582

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 40/64 (62%), Positives = 50/64 (78%)
 Frame = +2

Query: 29  APPTEDLLLYVITAAVRQKRRLIMEECRCMDDVLKECDSMSGNLDVWALLDDARDLVASF 208
           APPT+DLLLY I A V QKR+LI+E    MD++L+EC+SM+G LDVW LLDDA DLV + 
Sbjct: 519 APPTDDLLLYAIAACVLQKRKLIIERYSSMDEILRECNSMAGQLDVWRLLDDAHDLVVNL 578

Query: 209 HHKL 220
           H K+
Sbjct: 579 HDKI 582