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NBDC - LSDB Archive
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BP914315
Clone id YMU001_000057_E08
Library
Length 512
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000057_E08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TGCACTTCTCGCTACTCTCCTTTGCCAAAGGGGGATCGACCAAAACCTTTTTGAGGGCCA
CAGTTTCATCACCTGCAAAAGAGGATACTTCACAGTTCTGTTCATCAACATTCAGCACAG
TTGCATTTTGTTTCTGCATTTCCTTAGGATCTGCATCGACAGTTCGTAATTGAGTTGGCG
CATGCTCTTCTAGCAGGTGATAGCTCTCTCCTCCCTTTAAATGGTTGCATGTTTCTGTCG
GGTTCTCCAAAGAAACTGCAATTTCTTCAGCTTTTTTGCTATCCGCAATCCCTTGATTAT
CTTGGCCAACAAACCTGCTACCCTCTAGCACTGAGACCTTGTCTACCTTGAGTACCTTTT
TCTTTCTGGGTTTCTTCTTCTTTTGAACTGTCATGTCATGATTACCACCTGCATGGCCAA
TTTCATGCAACTGCCCATGGAAATCCTCATTACGAGCACCCAAAATTTTGGTGTCATCGC
TTGCATAATTCATTTCAGTATTTAAACTTTTA
■■Homology search results ■■ -
sp_hit_id Q8P4G1
Definition sp|Q8P4G1|RSMB_XANCP Ribosomal RNA small subunit methyltransferase B OS=Xanthomonas campestris pv. campestris
Align length 33
Score (bit) 32.3
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914315|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_E08.
         (486 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8P4G1|RSMB_XANCP Ribosomal RNA small subunit methyltransfera...    32   1.2  
sp|Q9QX96|SALL2_MOUSE Sal-like protein 2 OS=Mus musculus GN=Sall...    31   2.6  
sp|Q5R6F3|ZN512_PONAB Zinc finger protein 512 OS=Pongo abelii GN...    31   3.4  
sp|Q95JV5|ZN512_MACFA Zinc finger protein 512 OS=Macaca fascicul...    31   3.4  
sp|Q96ME7|ZN512_HUMAN Zinc finger protein 512 OS=Homo sapiens GN...    31   3.4  
sp|Q9N4M4|ANC1_CAEEL Nuclear anchorage protein 1 OS=Caenorhabdit...    31   3.4  
sp|Q8PG22|RSMB_XANAC Ribosomal RNA small subunit methyltransfera...    30   5.7  
sp|A4FV61|ZN512_BOVIN Zinc finger protein 512 OS=Bos taurus GN=Z...    30   7.5  
sp|A5VJH6|Y736_LACRD Putative metalloprotease Lreu_0736 OS=Lacto...    29   9.8  
sp|Q91994|OTX1_DANRE Homeobox protein OTX1 OS=Danio rerio GN=otx...    29   9.8  
sp|O00241|SIRB1_HUMAN Signal-regulatory protein beta-1 OS=Homo s...    29   9.9  

>sp|Q8P4G1|RSMB_XANCP Ribosomal RNA small subunit methyltransferase
           B OS=Xanthomonas campestris pv. campestris GN=rsmB PE=3
           SV=1
          Length = 437

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -3

Query: 214 GGESYHLLEEHAPTQLRTVDADPKEMQKQNATV 116
           GG++ HLLE H   QL  +D D + +++   TV
Sbjct: 259 GGKAAHLLERHPQLQLTALDVDARRLERVRQTV 291


>sp|Q9QX96|SALL2_MOUSE Sal-like protein 2 OS=Mus musculus GN=Sall2
           PE=2 SV=1
          Length = 1004

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 22/76 (28%), Positives = 30/76 (39%)
 Frame = -3

Query: 325 EGSRFVGQDNQGIADSKKAEEIAVSLENPTETCNHLKGGESYHLLEEHAPTQLRTVDADP 146
           EGS   G  + G A   +  ++  SL +     NHLK   S+       P  L  + A P
Sbjct: 531 EGSAIAGVADSGSATRMQLSKLVTSLPSWALLTNHLKSTGSFPF-----PYVLEPLGASP 585

Query: 145 KEMQKQNATVLNVDEQ 98
            E  K    V  +D Q
Sbjct: 586 SETSKLQQLVEKIDRQ 601


>sp|Q5R6F3|ZN512_PONAB Zinc finger protein 512 OS=Pongo abelii
           GN=ZNF512 PE=2 SV=1
          Length = 567

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 9/96 (9%)
 Frame = -3

Query: 277 KKAEEIAVSLENPTETCNHL------KGGESYHLLEEHAPTQLRTVDADP---KEMQKQN 125
           +K  + A  LE  T  C+H       K G +YHL  EH P         P   KEM  ++
Sbjct: 273 RKCGKGAAELEKMTLKCHHCGKPYRSKAGLAYHLRSEHGPISFFPESGQPECLKEMNLES 332

Query: 124 ATVLNVDEQNCEVSSFAGDETVALKKVLVDPPLAKE 17
            +   V  ++ +++ +   E       L    LAKE
Sbjct: 333 KSGGRVQRRSAKIAVYHLQE-------LASAELAKE 361


>sp|Q95JV5|ZN512_MACFA Zinc finger protein 512 OS=Macaca
           fascicularis GN=ZNF512 PE=2 SV=1
          Length = 565

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 9/96 (9%)
 Frame = -3

Query: 277 KKAEEIAVSLENPTETCNHL------KGGESYHLLEEHAPTQLRTVDADP---KEMQKQN 125
           +K  + A  LE  T  C+H       K G +YHL  EH P         P   KEM  ++
Sbjct: 272 RKCGKGAAELEKMTLKCHHCGKPYRSKAGLAYHLRSEHGPISFFPESGQPECLKEMNLES 331

Query: 124 ATVLNVDEQNCEVSSFAGDETVALKKVLVDPPLAKE 17
            +   V  ++ +++ +   E       L    LAKE
Sbjct: 332 KSGGRVQRRSAKIAVYHLQE-------LASAELAKE 360


>sp|Q96ME7|ZN512_HUMAN Zinc finger protein 512 OS=Homo sapiens
           GN=ZNF512 PE=1 SV=1
          Length = 567

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 9/96 (9%)
 Frame = -3

Query: 277 KKAEEIAVSLENPTETCNHL------KGGESYHLLEEHAPTQLRTVDADP---KEMQKQN 125
           +K  + A  LE  T  C+H       K G +YHL  EH P         P   KEM  ++
Sbjct: 273 RKCGKGAAELEKMTLKCHHCGKPYRSKAGLAYHLRSEHGPISFFPESGQPECLKEMNLES 332

Query: 124 ATVLNVDEQNCEVSSFAGDETVALKKVLVDPPLAKE 17
            +   V  ++ +++ +   E       L    LAKE
Sbjct: 333 KSGGRVQRRSAKIAVYHLQE-------LASAELAKE 361


>sp|Q9N4M4|ANC1_CAEEL Nuclear anchorage protein 1 OS=Caenorhabditis
            elegans GN=anc-1 PE=1 SV=3
          Length = 8545

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
 Frame = -3

Query: 277  KKAEEIAVSLENPTETCNHLKGGESYHLLEEHAPTQLRTVDADPKEMQKQNATVLNVDE- 101
            +K EE  + LE      + + G     L  E +P     +DA     Q+ NAT++++D+ 
Sbjct: 2106 EKLEESKLKLEKARPLLDQI-GDNVEKLSREQSPDTSDAIDALSNVHQQYNATIMSIDDK 2164

Query: 100  ----QNCEVSSFAGDETVALKKVLVDPP 29
                +N E  + A D+ ++   V+ + P
Sbjct: 2165 IDELKNPEEDTSAADQLISELHVISEMP 2192


>sp|Q8PG22|RSMB_XANAC Ribosomal RNA small subunit methyltransferase
           B OS=Xanthomonas axonopodis pv. citri GN=rsmB PE=3 SV=1
          Length = 436

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -3

Query: 214 GGESYHLLEEHAPTQLRTVDADPKEMQKQNATV 116
           GG++ HLLE H   QL  +D D + +++   T+
Sbjct: 258 GGKAAHLLERHPGLQLVALDVDARRLERVQQTL 290


>sp|A4FV61|ZN512_BOVIN Zinc finger protein 512 OS=Bos taurus
           GN=ZNF512 PE=2 SV=1
          Length = 567

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 9/96 (9%)
 Frame = -3

Query: 277 KKAEEIAVSLENPTETCNHL------KGGESYHLLEEHAPTQLRTVDADP---KEMQKQN 125
           +K  + A  LE  T  C+H       K G +YHL  EH P         P   K+M  ++
Sbjct: 273 RKCGKGAAELEKMTLKCHHCGKPYRSKAGLAYHLRSEHGPISFFPESGQPECLKDMSLES 332

Query: 124 ATVLNVDEQNCEVSSFAGDETVALKKVLVDPPLAKE 17
            +   V  ++ +++ +   E       L    LAKE
Sbjct: 333 KSGGRVQRRSAKIAVYHLQE-------LASAELAKE 361


>sp|A5VJH6|Y736_LACRD Putative metalloprotease Lreu_0736
           OS=Lactobacillus reuteri (strain DSM 20016) GN=Lreu_0736
           PE=3 SV=1
          Length = 159

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = -3

Query: 175 TQLRTVDADPKEMQKQNATVLNVDEQNCEVSSFAGDETVALKKVLVDPPLAKE 17
           T++     +  E++K NA   NVD    +V SFA +E      +++DP +A E
Sbjct: 38  TEMSLTFVNNPEIKKLNAQYRNVDRAT-DVLSFAAEEAGDETPIIMDPEMAAE 89


>sp|Q91994|OTX1_DANRE Homeobox protein OTX1 OS=Danio rerio GN=otx1
           PE=2 SV=1
          Length = 323

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 20/55 (36%), Positives = 25/55 (45%)
 Frame = +3

Query: 30  GGSTKTFLRATVSSPAKEDTSQFCSSTFSTVAFCFCISLGSASTVRN*VGACSSS 194
           G STKT      SSP +E T    S  F+  A     S  S+S+  N  G  S+S
Sbjct: 100 GSSTKTRPAKKKSSPTRESTGSESSGQFTPPAVSSAGSSSSSSSSTNNTGISSTS 154
tr_hit_id Q9K1N0
Definition tr|Q9K1N0|Q9K1N0_NEIMB DnaK suppressor protein OS=Neisseria meningitidis serogroup B
Align length 90
Score (bit) 38.5
E-value 0.17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914315|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_E08.
         (486 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9K1N0|Q9K1N0_NEIMB DnaK suppressor protein OS=Neisseria meni...    39   0.17 
tr|A9LZV4|A9LZV4_NEIM0 DnaK suppressor protein OS=Neisseria meni...    39   0.17 
tr|A1KR88|A1KR88_NEIMF Putative DnaK suppressor protein OS=Neiss...    39   0.17 
tr|A1IP66|A1IP66_NEIMA Putative DnaK suppressor protein OS=Neiss...    39   0.17 
tr|Q6CRA6|Q6CRA6_KLULA KLLA0D10593p OS=Kluyveromyces lactis GN=K...    38   0.28 
tr|Q5F5L9|Q5F5L9_NEIG1 Putative dosage-dependent DnaK suppressor...    37   0.48 
tr|B4RPT0|B4RPT0_NEIG2 DskA OS=Neisseria gonorrhoeae (strain NCC...    37   0.48 
tr|Q4QXL0|Q4QXL0_OXYSC Golgi-associated protein (Fragment) OS=Ox...    35   1.4  
tr|B0VQ13|B0VQ13_ACIBS 16S rRNA m5C967 SAM-dependent methyltrans...    35   1.8  
tr|B0VAD9|B0VAD9_ACIBY 16S rRNA m5C967 SAM-dependent methyltrans...    35   1.8  
tr|A3MAA2|A3MAA2_ACIBT 16S rRNA m5C967 SAM-dependent methyltrans...    35   1.8  
tr|B7I2C4|B7I2C4_ACIBA Ribosomal RNA small subunit methyltransfe...    35   1.8  
tr|B7GUZ6|B7GUZ6_ACIBA Ribosomal RNA small subunit methyltransfe...    35   1.8  
tr|A9DJP9|A9DJP9_9FLAO Putative transcriptional regulator OS=Kor...    35   2.4  
tr|A5K8U2|A5K8U2_PLAVI Putative uncharacterized protein OS=Plasm...    35   2.4  
tr|Q7P1N9|Q7P1N9_CHRVO DnaK suppressor protein OS=Chromobacteriu...    34   3.1  
tr|B2I2H8|B2I2H8_ACIBC tRNA and rRNA cytosine-C5-methylase OS=Ac...    34   3.1  
tr|Q7QIY6|Q7QIY6_ANOGA AGAP007133-PA OS=Anopheles gambiae GN=AGA...    34   4.2  
tr|Q7ZU54|Q7ZU54_DANRE Orthodenticle homolog 1 OS=Danio rerio GN...    33   7.0  
tr|A1SSQ1|A1SSQ1_PSYIN Acriflavin resistance protein OS=Psychrom...    33   7.0  
tr|B6G8Z8|B6G8Z8_9ACTN Putative uncharacterized protein OS=Colli...    33   7.0  
tr|Q0FDN7|Q0FDN7_9RHOB Esterase/lipase/thioesterase OS=Rhodobact...    33   9.1  
tr|Q9FYW6|Q9FYW6_SOLLC BAC19.10 OS=Solanum lycopersicum PE=4 SV=1      33   9.1  
tr|Q29LR0|Q29LR0_DROPS GA12158 OS=Drosophila pseudoobscura pseud...    33   9.3  

>tr|Q9K1N0|Q9K1N0_NEIMB DnaK suppressor protein OS=Neisseria
           meningitidis serogroup B GN=dksA PE=4 SV=1
          Length = 138

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
 Frame = -3

Query: 250 LENPTETCNHLKGGESYH------LLEEHAPTQLRTVDADPKEMQKQNATVLNVDEQNCE 89
           +EN + T  HL+  ES          EE    +LRT D + K + K  AT+ N+DE +  
Sbjct: 40  IENASATTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYG 99

Query: 88  VSSFAGDETVALKKVLVDP--PLAKESSEK 5
             +  G E + LK++L  P   L+ ES E+
Sbjct: 100 FCADTG-EPIGLKRLLARPTATLSVESQER 128


>tr|A9LZV4|A9LZV4_NEIM0 DnaK suppressor protein OS=Neisseria
           meningitidis serogroup C (strain 053442) GN=dksA PE=4
           SV=1
          Length = 138

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
 Frame = -3

Query: 250 LENPTETCNHLKGGESYH------LLEEHAPTQLRTVDADPKEMQKQNATVLNVDEQNCE 89
           +EN + T  HL+  ES          EE    +LRT D + K + K  AT+ N+DE +  
Sbjct: 40  IENASATTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYG 99

Query: 88  VSSFAGDETVALKKVLVDP--PLAKESSEK 5
             +  G E + LK++L  P   L+ ES E+
Sbjct: 100 FCADTG-EPIGLKRLLARPTATLSVESQER 128


>tr|A1KR88|A1KR88_NEIMF Putative DnaK suppressor protein
           OS=Neisseria meningitidis serogroup C / serotype 2a
           (strain ATCC 700532 / FAM18) GN=dksA PE=4 SV=1
          Length = 138

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
 Frame = -3

Query: 250 LENPTETCNHLKGGESYH------LLEEHAPTQLRTVDADPKEMQKQNATVLNVDEQNCE 89
           +EN + T  HL+  ES          EE    +LRT D + K + K  AT+ N+DE +  
Sbjct: 40  IENASATTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYG 99

Query: 88  VSSFAGDETVALKKVLVDP--PLAKESSEK 5
             +  G E + LK++L  P   L+ ES E+
Sbjct: 100 FCADTG-EPIGLKRLLARPTATLSVESQER 128


>tr|A1IP66|A1IP66_NEIMA Putative DnaK suppressor protein
           OS=Neisseria meningitidis serogroup A GN=NMA0213 PE=4
           SV=1
          Length = 138

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
 Frame = -3

Query: 250 LENPTETCNHLKGGESYH------LLEEHAPTQLRTVDADPKEMQKQNATVLNVDEQNCE 89
           +EN + T  HL+  ES          EE    +LRT D + K + K  AT+ N+DE +  
Sbjct: 40  IENASATTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYG 99

Query: 88  VSSFAGDETVALKKVLVDP--PLAKESSEK 5
             +  G E + LK++L  P   L+ ES E+
Sbjct: 100 FCADTG-EPIGLKRLLARPTATLSVESQER 128


>tr|Q6CRA6|Q6CRA6_KLULA KLLA0D10593p OS=Kluyveromyces lactis
           GN=KLLA0D10593g PE=4 SV=1
          Length = 925

 Score = 37.7 bits (86), Expect = 0.28
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
 Frame = -3

Query: 313 FVGQDNQGIADSKKAEEIAVSLENPTETCNHLKGGESYHLL------EEHAPTQLRTVDA 152
           F+ +   G+A  K+  E  VS ++     NH    ES  LL      EEHA   + T+  
Sbjct: 667 FILRQKCGMAKLKREREKTVSSDDENSGDNHNGDAESKELLPNDGYSEEHARRIISTIPL 726

Query: 151 DPKEMQKQNATVLNVDEQNCEVSSFAGDETVALKKVL 41
           DP+ +  Q ++  N+   N   SS    + ++LK +L
Sbjct: 727 DPEPINAQQSSGSNITSPNGSHSS----DVLSLKSIL 759


>tr|Q5F5L9|Q5F5L9_NEIG1 Putative dosage-dependent DnaK suppressor
           protein OS=Neisseria gonorrhoeae (strain ATCC 700825 /
           FA 1090) GN=NGO1904 PE=4 SV=1
          Length = 138

 Score = 37.0 bits (84), Expect = 0.48
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
 Frame = -3

Query: 250 LENPTETCNHLKGGESYH------LLEEHAPTQLRTVDADPKEMQKQNATVLNVDEQNCE 89
           +EN + T  HL+  ES          EE    +LRT D + K + K  AT+ N+DE +  
Sbjct: 40  IENASVTTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYG 99

Query: 88  VSSFAGDETVALKKVLVDP--PLAKESSEK 5
             +  G E + LK++L  P   L+ E+ E+
Sbjct: 100 FCADTG-EPIGLKRLLARPTATLSVEAQER 128


>tr|B4RPT0|B4RPT0_NEIG2 DskA OS=Neisseria gonorrhoeae (strain
           NCCP11945) GN=NGK_2353 PE=4 SV=1
          Length = 138

 Score = 37.0 bits (84), Expect = 0.48
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
 Frame = -3

Query: 250 LENPTETCNHLKGGESYH------LLEEHAPTQLRTVDADPKEMQKQNATVLNVDEQNCE 89
           +EN + T  HL+  ES          EE    +LRT D + K + K  AT+ N+DE +  
Sbjct: 40  IENASVTTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYG 99

Query: 88  VSSFAGDETVALKKVLVDP--PLAKESSEK 5
             +  G E + LK++L  P   L+ E+ E+
Sbjct: 100 FCADTG-EPIGLKRLLARPTATLSVEAQER 128


>tr|Q4QXL0|Q4QXL0_OXYSC Golgi-associated protein (Fragment)
           OS=Oxyuranus scutellatus scutellatus PE=2 SV=1
          Length = 163

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
 Frame = -3

Query: 280 SKKAEEIAVSLENPTETCNHLKGGESYHLLEEHAPTQLRTVD--------ADPKEMQKQN 125
           SK  ++ A SL +PTE  N   G +   + EE+    L T+           P E +   
Sbjct: 30  SKINQKAAESLADPTEYENLFPGLKEAFVAEEYIKNSLYTISRPANEYPLVTPNEERNIM 89

Query: 124 ATVLNVDEQNCEVSSFAGDETVALKKVLVDPPLAKESSEK 5
              ++   QN +VS    DE+V   + L+ PP+A++ SE+
Sbjct: 90  QETIDFTVQN-KVSEEPEDESVPSPRPLIMPPVARKVSEE 128


>tr|B0VQ13|B0VQ13_ACIBS 16S rRNA m5C967 SAM-dependent
           methyltransferase OS=Acinetobacter baumannii (strain
           SDF) GN=sun PE=4 SV=1
          Length = 434

 Score = 35.0 bits (79), Expect = 1.8
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = -3

Query: 214 GGESYHLLEEHAPTQLRTVDADPKEMQK--QNATVLNVDEQNCEVSSFAGDET 62
           GG++ HLLE+  P QL  +D DP  + +  +N   L +D+ + E+   A D T
Sbjct: 258 GGKTAHLLEKFKPAQLIAIDQDPSRLVRVTENLNRLALDQSHTEI--LAADAT 308


>tr|B0VAD9|B0VAD9_ACIBY 16S rRNA m5C967 SAM-dependent
           methyltransferase OS=Acinetobacter baumannii (strain
           AYE) GN=sun PE=4 SV=1
          Length = 434

 Score = 35.0 bits (79), Expect = 1.8
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = -3

Query: 214 GGESYHLLEEHAPTQLRTVDADPKEMQK--QNATVLNVDEQNCEVSSFAGDET 62
           GG++ HLLE+  P QL  +D DP  + +  +N   L +D+ + E+   A D T
Sbjct: 258 GGKTAHLLEKFKPAQLIAIDQDPSRLVRVTENLNRLALDQSHTEI--LAADAT 308