BP914321
Clone id YMU001_000057_F02
Library
Length 534
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000057_F02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ACTTGAACGAGATACGGATCGATTTAAAAGAAGATGATGTGCTTGCTTCCCACATACATG
TCTAAATGTTAACTACAATTTCACTCCTTCCTAATTTGACAAAGAGTGCTGCATTCCTGC
TACTCTGATAGCTCATGAAACAAACTTTTGTTCAAGTTAAACACAAGGCAGTCCAAGATT
TGAATGCCCTGTAGCTACAATAGAATGGTGCTCACAAAAGAACCTTTTGTTCAAGTTGAA
CACTCTTTAGTTCACGGTTCGGTGTGCCATTGATGCATTTTTCACAGAGGCCGTTGATGT
TGAGCCGAAGAAAGCAAGTGCGTAATGCCTTCGGTCCATAACCGATATTCGGTTTTATTC
TTGCATTCCAACTCTATCACTCCATGGTCTGTTTTAATGCCAAAGTACTGCCTTTCGTCC
ACACCATCAGGAACATCCCTCCCAGGCCACGCAGGAAGGTTCATGACAACATCTCGGACA
TTACGTTTTTTACTCTTGGTGATCCCCATACACTTGCTTTGTGACTTCACAATC
■■Homology search results ■■ -
sp_hit_id Q1RKF4
Definition sp|Q1RKF4|SYS_RICBR Seryl-tRNA synthetase OS=Rickettsia bellii (strain RML369-C)
Align length 50
Score (bit) 32.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914321|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_F02.
(534 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q1RKF4|SYS_RICBR Seryl-tRNA synthetase OS=Rickettsia bellii (... 32 1.9
sp|A8GY58|SYS_RICB8 Seryl-tRNA synthetase OS=Rickettsia bellii (... 32 1.9
sp|A2BSA4|SYS_PROMS Seryl-tRNA synthetase OS=Prochlorococcus mar... 32 1.9
sp|A3PE37|SYS_PROM0 Seryl-tRNA synthetase OS=Prochlorococcus mar... 32 2.5
sp|Q6NTN5|MTMRD_XENLA Myotubularin-related protein 13 OS=Xenopus... 31 3.3
sp|P56091|GAL1_CANAL Galactokinase OS=Candida albicans GN=GAL1 P... 31 4.3
sp|Q73IW5|SYS_WOLPM Seryl-tRNA synthetase OS=Wolbachia pipientis... 30 5.6
sp|O95248|MTMR5_HUMAN Myotubularin-related protein 5 OS=Homo sap... 30 5.6
sp|Q6ZPE2|MTMR5_MOUSE Myotubularin-related protein 5 OS=Mus musc... 30 7.3

>sp|Q1RKF4|SYS_RICBR Seryl-tRNA synthetase OS=Rickettsia bellii
(strain RML369-C) GN=serS PE=3 SV=1
Length = 426

Score = 32.0 bits (71), Expect = 1.9
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = -2

Query: 494 SKKRNVRDVVMNLPAWPGRDVPDGVDERQYFGIKTDHGVIELECKNKTEY 345
+ + +++ LP P +VP G+DE I+T HG ++L +NK ++
Sbjct: 91 NNNNELNELLNTLPNIPDEEVPYGIDESMNKLIRT-HGEVDLNAQNKKQH 139


>sp|A8GY58|SYS_RICB8 Seryl-tRNA synthetase OS=Rickettsia bellii
(strain OSU 85-389) GN=serS PE=3 SV=1
Length = 426

Score = 32.0 bits (71), Expect = 1.9
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = -2

Query: 494 SKKRNVRDVVMNLPAWPGRDVPDGVDERQYFGIKTDHGVIELECKNKTEY 345
+ + +++ LP P +VP G+DE I+T HG ++L +NK ++
Sbjct: 91 NNNNELNELLNTLPNIPDEEVPYGIDESMNKLIRT-HGEVDLNAQNKKQH 139


>sp|A2BSA4|SYS_PROMS Seryl-tRNA synthetase OS=Prochlorococcus
marinus (strain AS9601) GN=serS PE=3 SV=1
Length = 425

Score = 32.0 bits (71), Expect = 1.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2

Query: 485 RNVRDVVMNLPAWPGRDVPDGVDERQYFGIKT 390
+ V D + NLP +P +D P G DE + IKT
Sbjct: 99 KKVDDEIYNLPNFPSKDAPIGKDESENLQIKT 130


>sp|A3PE37|SYS_PROM0 Seryl-tRNA synthetase OS=Prochlorococcus
marinus (strain MIT 9301) GN=serS PE=3 SV=1
Length = 425

Score = 31.6 bits (70), Expect = 2.5
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2

Query: 485 RNVRDVVMNLPAWPGRDVPDGVDERQYFGIKT 390
+ V D V NLP +P +D P G DE IKT
Sbjct: 99 KEVDDEVYNLPNFPSKDAPIGKDESDNLQIKT 130


>sp|Q6NTN5|MTMRD_XENLA Myotubularin-related protein 13 OS=Xenopus
laevis GN=sbf2 PE=2 SV=1
Length = 1873

Score = 31.2 bits (69), Expect = 3.3
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = -2

Query: 482 NVRDVVMNLPAWPGRDVPDGVDERQYFGIKTDHGVIELECKNKTEYRLWTEGITHLLSSA 303
++ DV +PA P P +E+ +F +KT V ++ +LW + I + +S A
Sbjct: 1814 DLADVETVVPAAPTIGAPKHANEKAFFDVKTSKRVYNFCAQDAQSAQLWMDKIQNCISDA 1873


>sp|P56091|GAL1_CANAL Galactokinase OS=Candida albicans GN=GAL1 PE=3
SV=1
Length = 515

Score = 30.8 bits (68), Expect = 4.3
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -2

Query: 503 ITKSKKRNVRDVVMNLPAWPGRDVPDGVDERQYFGIKTDHGVIELECKNKTE 348
I S R V D V N W G D+ G+D+ +K ++E E N E
Sbjct: 289 IGTSSLRGVMDAVFNTCKWDGNDIDVGIDQ-----LKKMIAIVETELNNNQE 335


>sp|Q73IW5|SYS_WOLPM Seryl-tRNA synthetase OS=Wolbachia pipientis
wMel GN=serS PE=3 SV=1
Length = 425

Score = 30.4 bits (67), Expect = 5.6
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -2

Query: 497 KSKKRNVRDVVMNLPAWPGRDVPDGVDERQYFGIKTDHGVIELECKNKTEYRL 339
+++K + +V+ NLP P +DVP G DE ++ G + + ++ Y L
Sbjct: 91 QAEKDKLVNVLSNLPNIPAQDVPIGADENSNLEVRRYGGKRQFDFVPESHYEL 143


>sp|O95248|MTMR5_HUMAN Myotubularin-related protein 5 OS=Homo sapiens
GN=SBF1 PE=1 SV=3
Length = 1867

Score = 30.4 bits (67), Expect = 5.6
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = -2

Query: 518 SKCMGITKSKKRNVRDVVMNLPAWPGRDVPDGVDERQYFGIKTDHGVIELECKNKTEYRL 339
++C G+ ++ +V P P P VDE+ +F +KT V ++ +
Sbjct: 1801 TECKGVI-----DLAEVEAVAPGTPTMGAPKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQ 1855

Query: 338 WTEGITHLLSSA 303
W + I LS A
Sbjct: 1856 WVDRIQSCLSDA 1867


>sp|Q6ZPE2|MTMR5_MOUSE Myotubularin-related protein 5 OS=Mus musculus
GN=Sbf1 PE=1 SV=2
Length = 1867

Score = 30.0 bits (66), Expect = 7.3
Identities = 18/75 (24%), Positives = 32/75 (42%)
Frame = -2

Query: 527 KSQSKCMGITKSKKRNVRDVVMNLPAWPGRDVPDGVDERQYFGIKTDHGVIELECKNKTE 348
+ ++C G+ ++ +V P P P VDE+ +F +KT V ++
Sbjct: 1798 RMDTECKGVI-----DLAEVEAVAPGTPTIGAPKTVDEKAFFDVKTTRRVYNFCAQDVPS 1852

Query: 347 YRLWTEGITHLLSSA 303
+ W + I LS A
Sbjct: 1853 AQQWVDRIQSCLSDA 1867


tr_hit_id A7PUE8
Definition tr|A7PUE8|A7PUE8_VITVI Chromosome chr7 scaffold_31, whole genome shotgun sequence OS=Vitis vinifera
Align length 81
Score (bit) 79.3
E-value 1.0e-13
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914321|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_F02.
(534 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7PUE8|A7PUE8_VITVI Chromosome chr7 scaffold_31, whole genome... 79 1e-13
tr|A5BJ67|A5BJ67_VITVI Putative uncharacterized protein OS=Vitis... 79 1e-13
tr|A7NWT2|A7NWT2_VITVI Chromosome chr5 scaffold_2, whole genome ... 79 2e-13
tr|Q9M1W0|Q9M1W0_ARATH Putative uncharacterized protein F16M2_15... 77 6e-13
tr|Q9LKC2|Q9LKC2_ARATH Genomic DNA, chromosome 5, BAC clone:F6B6... 77 6e-13
tr|Q8W4K5|Q8W4K5_ARATH Putative uncharacterized protein At3g6330... 77 6e-13
tr|Q3EAF3|Q3EAF3_ARATH Uncharacterized protein At3g63300.2 OS=Ar... 77 6e-13
tr|A9T2K8|A9T2K8_PHYPA Predicted protein OS=Physcomitrella paten... 77 7e-13
tr|A7P593|A7P593_VITVI Chromosome chr4 scaffold_6, whole genome ... 74 4e-12
tr|Q8VY20|Q8VY20_ARATH Putative uncharacterized protein At4g1474... 74 5e-12
tr|Q683C3|Q683C3_ARATH Putative uncharacterized protein At4g1474... 74 5e-12
tr|O23330|O23330_ARATH Putative uncharacterized protein dl3410c ... 74 5e-12
tr|Q9LUI0|Q9LUI0_ARATH Emb|CAB10253.1 OS=Arabidopsis thaliana GN... 74 6e-12
tr|B6UEV0|B6UEV0_MAIZE Putative uncharacterized protein OS=Zea m... 72 2e-11
tr|Q75GL2|Q75GL2_ORYSJ Expressed protein (With alternative splic... 70 5e-11
tr|Q2QMH5|Q2QMH5_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 70 5e-11
tr|Q0IM29|Q0IM29_ORYSJ Os12g0604200 protein OS=Oryza sativa subs... 70 5e-11
tr|A3AKP0|A3AKP0_ORYSJ Putative uncharacterized protein OS=Oryza... 70 5e-11
tr|A2ZMG6|A2ZMG6_ORYSI Putative uncharacterized protein OS=Oryza... 70 5e-11
tr|A2XJW6|A2XJW6_ORYSI Putative uncharacterized protein OS=Oryza... 70 5e-11
tr|Q9LWR6|Q9LWR6_ORYSJ Putative uncharacterized protein P0431F01... 69 2e-10
tr|A2ZQZ7|A2ZQZ7_ORYSJ Putative uncharacterized protein OS=Oryza... 69 2e-10
tr|A2WMF2|A2WMF2_ORYSI Putative uncharacterized protein OS=Oryza... 69 2e-10
tr|Q6ID74|Q6ID74_ARATH At4g32785 OS=Arabidopsis thaliana GN=At4g... 64 5e-09
tr|Q2A9B0|Q2A9B0_BRAOL Putative uncharacterized protein OS=Brass... 53 1e-05
tr|A7R2D2|A7R2D2_VITVI Chromosome undetermined scaffold_419, who... 51 3e-05
tr|Q2A9D6|Q2A9D6_BRAOL Putative uncharacterized protein OS=Brass... 49 2e-04
tr|Q2A9S6|Q2A9S6_BRAOL Putative uncharacterized protein OS=Brass... 49 2e-04
tr|Q5U1F1|Q5U1F1_ARATH At4g17350 OS=Arabidopsis thaliana PE=2 SV=1 47 5e-04
tr|Q0WP49|Q0WP49_ARATH Putative uncharacterized protein At4g1735... 47 5e-04

>tr|A7PUE8|A7PUE8_VITVI Chromosome chr7 scaffold_31, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00023774001
PE=4 SV=1
Length = 472

Score = 79.3 bits (194), Expect = 1e-13
Identities = 37/81 (45%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Frame = -2

Query: 530 VKSQSKCMGITKSKKRNVRDVVMNLPAWPGRDVPDGVDERQYFGIK-TDHGVIELECKNK 354
+KS+ ITK KK V +VV ++PAWPGR + +G ++R YFG+K T GV+E EC+N+
Sbjct: 385 MKSRHVAGTITKKKKIVVLEVVKDMPAWPGRHLLEGGEQRHYFGLKTTPRGVVEFECRNQ 444

Query: 353 TEYRLWTEGITHLLSSAQHQR 291
EY +WT+G+ LL+ +R
Sbjct: 445 REYDIWTQGVERLLTIVAERR 465


>tr|A5BJ67|A5BJ67_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_035443 PE=4 SV=1
Length = 477

Score = 79.3 bits (194), Expect = 1e-13
Identities = 37/81 (45%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Frame = -2

Query: 530 VKSQSKCMGITKSKKRNVRDVVMNLPAWPGRDVPDGVDERQYFGIK-TDHGVIELECKNK 354
+KS+ ITK KK V +VV ++PAWPGR + +G ++R YFG+K T GV+E EC+N+
Sbjct: 390 MKSRHVAGTITKKKKIVVLEVVKDMPAWPGRHLLEGGEQRHYFGLKTTPRGVVEFECRNQ 449

Query: 353 TEYRLWTEGITHLLSSAQHQR 291
EY +WT+G+ LL+ +R
Sbjct: 450 REYDIWTQGVERLLTIVAERR 470


>tr|A7NWT2|A7NWT2_VITVI Chromosome chr5 scaffold_2, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00020047001
PE=4 SV=1
Length = 461

Score = 78.6 bits (192), Expect = 2e-13
Identities = 37/77 (48%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = -2

Query: 530 VKSQSKCMGITKSKKRNVRDVVMNLPAWPGRDVPDGVDERQYFGIKT-DHGVIELECKNK 354
+KS+ ITK KK V +V ++PAWPGR + +G + R+YFG+KT GVIE EC+N+
Sbjct: 376 MKSRHVAGTITKKKKNVVLEVCKDMPAWPGRHLLEGGEHRRYFGLKTIQRGVIEFECRNQ 435

Query: 353 TEYRLWTEGITHLLSSA 303
EY +WT G++ LL+ A
Sbjct: 436 REYDIWTHGVSRLLTVA 452


>tr|Q9M1W0|Q9M1W0_ARATH Putative uncharacterized protein F16M2_150
OS=Arabidopsis thaliana GN=F16M2_150 PE=4 SV=1
Length = 486

Score = 77.0 bits (188), Expect = 6e-13
Identities = 39/92 (42%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Frame = -2

Query: 533 IVKSQSKCMG--ITKSKKRNVRDVVMNLPAWPGRDVPDGVDERQYFGIKTD-HGVIELEC 363
++K +SK +G TK KK V +V ++PAW GRD+ +G D+ YFG+KT+ VIE EC
Sbjct: 393 VLKMKSKHVGGTFTKKKKHMVLEVRKDIPAWAGRDLFNG-DKHHYFGLKTETKRVIEFEC 451

Query: 362 KNKTEYRLWTEGITHLLSSAQHQRPL*KMHQW 267
+N+ EY +WT+G++ LL+ A ++ M +W
Sbjct: 452 RNQREYEIWTQGVSRLLAIAAEKKQKSSMSKW 483


>tr|Q9LKC2|Q9LKC2_ARATH Genomic DNA, chromosome 5, BAC clone:F6B6
(At5g43870) OS=Arabidopsis thaliana GN=At5g43870 PE=2
SV=1
Length = 453

Score = 77.0 bits (188), Expect = 6e-13
Identities = 40/84 (47%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Frame = -2

Query: 533 IVKSQSKCMG--ITKSKKRNVRDVVMNLPAWPGRDVPDGVDERQYFGIKT-DHGVIELEC 363
I+K++SK + ITK KK V +V LPAWPGR++ +G + +YFG+KT + VIE EC
Sbjct: 367 ILKTKSKHVAGTITKKKKNVVVGLVKGLPAWPGREMLEGGENLRYFGLKTVEKRVIEFEC 426

Query: 362 KNKTEYRLWTEGITHLLSSAQHQR 291
K++ EY LWT+G++ LLS A ++
Sbjct: 427 KSQREYDLWTQGVSMLLSIASDRK 450


>tr|Q8W4K5|Q8W4K5_ARATH Putative uncharacterized protein At3g63300;
F16M2_150 (Putative uncharacterized protein At3g63300)
OS=Arabidopsis thaliana GN=At3g63300/F16M2_150 PE=2 SV=1
Length = 498

Score = 77.0 bits (188), Expect = 6e-13
Identities = 39/92 (42%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Frame = -2

Query: 533 IVKSQSKCMG--ITKSKKRNVRDVVMNLPAWPGRDVPDGVDERQYFGIKTD-HGVIELEC 363
++K +SK +G TK KK V +V ++PAW GRD+ +G D+ YFG+KT+ VIE EC
Sbjct: 405 VLKMKSKHVGGTFTKKKKHMVLEVRKDIPAWAGRDLFNG-DKHHYFGLKTETKRVIEFEC 463

Query: 362 KNKTEYRLWTEGITHLLSSAQHQRPL*KMHQW 267
+N+ EY +WT+G++ LL+ A ++ M +W
Sbjct: 464 RNQREYEIWTQGVSRLLAIAAEKKQKSSMSKW 495


>tr|Q3EAF3|Q3EAF3_ARATH Uncharacterized protein At3g63300.2
OS=Arabidopsis thaliana GN=At3g63300 PE=4 SV=1
Length = 382

Score = 77.0 bits (188), Expect = 6e-13
Identities = 39/92 (42%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Frame = -2

Query: 533 IVKSQSKCMG--ITKSKKRNVRDVVMNLPAWPGRDVPDGVDERQYFGIKTD-HGVIELEC 363
++K +SK +G TK KK V +V ++PAW GRD+ +G D+ YFG+KT+ VIE EC
Sbjct: 289 VLKMKSKHVGGTFTKKKKHMVLEVRKDIPAWAGRDLFNG-DKHHYFGLKTETKRVIEFEC 347

Query: 362 KNKTEYRLWTEGITHLLSSAQHQRPL*KMHQW 267
+N+ EY +WT+G++ LL+ A ++ M +W
Sbjct: 348 RNQREYEIWTQGVSRLLAIAAEKKQKSSMSKW 379


>tr|A9T2K8|A9T2K8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_59252 PE=4 SV=1
Length = 400

Score = 76.6 bits (187), Expect = 7e-13
Identities = 35/75 (46%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Frame = -2

Query: 530 VKSQSKCM--GITKSKKRNVRDVVMNLPAWPGRDVPDGVDERQYFGIKTDHGVIELECKN 357
V+ QSK M +TK+KK + V N+ AWPGR++ +G + R+YF ++T G +E EC+N
Sbjct: 317 VRLQSKHMRGALTKNKKSIIFQVFSNIRAWPGRNILEGSENRRYFALRTSSGDMEFECRN 376

Query: 356 KTEYRLWTEGITHLL 312
K E+++WTEGI+ LL
Sbjct: 377 KEEHQVWTEGISRLL 391


>tr|A7P593|A7P593_VITVI Chromosome chr4 scaffold_6, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00032444001
PE=4 SV=1
Length = 386

Score = 74.3 bits (181), Expect = 4e-12
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Frame = -2

Query: 530 VKSQSKCMG--ITKSKKRNVRDVVMNLPAWPGRDVPDGVDERQYFGIKTDHGVIELECKN 357
VK +SK M TK KK V V ++PAWPGR+ + ++R YFGIKTD +IE EC+N
Sbjct: 305 VKMKSKHMAGTFTKKKKCVVSGVYCDIPAWPGREREESSEQRAYFGIKTDDRIIEFECRN 364

Query: 356 KTEYRLWTEGITHLL 312
++ ++W EGI ++L
Sbjct: 365 NSDKQMWAEGIQYML 379


>tr|Q8VY20|Q8VY20_ARATH Putative uncharacterized protein At4g14740
OS=Arabidopsis thaliana GN=At4g14740 PE=2 SV=1
Length = 475

Score = 73.9 bits (180), Expect = 5e-12
Identities = 36/84 (42%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Frame = -2

Query: 533 IVKSQSKCMG--ITKSKKRNVRDVVMNLPAWPGRDVPDGVDERQYFGIKT-DHGVIELEC 363
++K +S+ +G TK KK V DV+ N+PAWPGR + +G D+ +YFG+KT G +E E
Sbjct: 389 MLKMKSRHVGGTFTKKKKNIVLDVIKNVPAWPGRHLLEGGDDLRYFGLKTVMRGDVEFEV 448

Query: 362 KNKTEYRLWTEGITHLLSSAQHQR 291
K++ EY +WT+G++ LL A ++
Sbjct: 449 KSQREYEMWTQGVSRLLVLAAERK 472