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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914334
Clone id YMU001_000057_G04
Library
Length 553
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000057_G04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTANGATCAAACCAAAAACTTGCGCAACACCTCAATTACAATTAATGAAATTGACAGGA
GCTGATCCAGCCATTTCTTTAATGGTGGAGGACCCAGCAGACATGCATTGAAAGCATGTA
AAAAGCCACTCCTGACAGAAAGAATCAAGAATCCTCCTAAACCCTAGTACCCAAATAGAA
AGTGAAATGTTTGCGACCTCTCAATACATACATAAGTGCGGTGCAGGGATGGCTGGATAC
TCTACAAGAATAAATTGAATACAGAGAATCTCGGGTAAAGATGGCGACGACTAAAGGCTG
CTAAACTAGGCTTTATGTACTCATCCCGCATCTGCACTTAGATCACTTGGCCTGTGCAGA
AATCTGGACAACTCAACACGATATGTACACTTGCCTGCAGCCCTACCGGCAACACTTCAG
AGAGGGGAAAGACTACTCGTACACAGGCTGAGGCAGGTCATCAGATACCGTGCCGATTGA
AATCGGCCAATACCTGTTCGGCCATTGCCCACATAATCTTCATTGCGCCCCTATTGCTGC
TGCAGTCCGCTGC
■■Homology search results ■■ -
sp_hit_id Q4QQW8
Definition sp|Q4QQW8|PLBL2_RAT Putative phospholipase B-like 2 OS=Rattus norvegicus
Align length 84
Score (bit) 34.7
E-value 0.32
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914334|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_G04.
         (553 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q4QQW8|PLBL2_RAT Putative phospholipase B-like 2 OS=Rattus no...    35   0.32 
sp|Q3TCN2|PLBL2_MOUSE Putative phospholipase B-like 2 OS=Mus mus...    33   0.71 
sp|P0C568|L_MOKV Large structural protein OS=Mokola virus GN=L P...    32   2.7  

>sp|Q4QQW8|PLBL2_RAT Putative phospholipase B-like 2 OS=Rattus
           norvegicus GN=RDCR-0918-3 PE=1 SV=2
          Length = 585

 Score = 34.7 bits (78), Expect = 0.32
 Identities = 22/84 (26%), Positives = 38/84 (45%)
 Frame = +2

Query: 191 LRPLNTYISAVQGWLDTLQE*IEYRESRVKMATTKGC*TRLYVLIPHLHLDHLACAEIWT 370
           ++PL   +  + G L+ L+  +   ++  K +   G  + L  L+P  H D L     W 
Sbjct: 205 IKPLGFLLLQISGDLEDLEPALN--KTNTKPSVGSGSCSALIKLLPGSH-DLLVAHNTWN 261

Query: 371 TQHDMYTCLQPYRQHFREGKDYSY 442
           +  +M   ++ YR  FREG    Y
Sbjct: 262 SYQNMLRIIKKYRLQFREGPQEEY 285


>sp|Q3TCN2|PLBL2_MOUSE Putative phospholipase B-like 2 OS=Mus
           musculus PE=1 SV=2
          Length = 594

 Score = 33.5 bits (75), Expect = 0.71
 Identities = 22/84 (26%), Positives = 38/84 (45%)
 Frame = +2

Query: 191 LRPLNTYISAVQGWLDTLQE*IEYRESRVKMATTKGC*TRLYVLIPHLHLDHLACAEIWT 370
           ++PL   +  + G L+ L+  +   ++  K +   G  + L  L+P  H D L     W 
Sbjct: 214 IKPLGFLLLQISGDLEDLEPALN--KTNTKPSLGSGSCSALIKLLPGGH-DLLVAHNTWN 270

Query: 371 TQHDMYTCLQPYRQHFREGKDYSY 442
           +  +M   ++ YR  FREG    Y
Sbjct: 271 SYQNMLRIIKKYRLQFREGPQEEY 294


>sp|P0C568|L_MOKV Large structural protein OS=Mokola virus GN=L PE=3
            SV=1
          Length = 2127

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +1

Query: 391  LPAALPATLQRGERLLVHRLRQVIRYRAD 477
            +PAA P T++ G R ++  L+QV+RY  D
Sbjct: 1487 VPAAYPTTMEEGNRSVLCYLQQVLRYERD 1515
tr_hit_id A3IEN3
Definition tr|A3IEN3|A3IEN3_9BACI Putative uncharacterized protein OS=Bacillus sp. B14905
Align length 44
Score (bit) 33.9
E-value 6.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914334|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_G04.
         (553 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A3IEN3|A3IEN3_9BACI Putative uncharacterized protein OS=Bacil...    34   6.0  
tr|Q6RCF3|Q6RCF3_9CAUD Putative uncharacterized protein OS=Vibri...    33   10.0 

>tr|A3IEN3|A3IEN3_9BACI Putative uncharacterized protein OS=Bacillus
           sp. B14905 GN=BB14905_11105 PE=4 SV=1
          Length = 286

 Score = 33.9 bits (76), Expect = 6.0
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
 Frame = +2

Query: 314 YVLIPHLHLDHLACAEIWT-----TQHDMYT-CLQPYRQHFREG 427
           YV+  HLHLDH  C E++T      Q D +   LQ Y ++ ++G
Sbjct: 116 YVVASHLHLDHAGCLELFTNATIIVQEDEFNGTLQTYARNVKDG 159


>tr|Q6RCF3|Q6RCF3_9CAUD Putative uncharacterized protein OS=Vibrio
           phage VP2 PE=4 SV=1
          Length = 594

 Score = 33.1 bits (74), Expect = 10.0
 Identities = 20/63 (31%), Positives = 34/63 (53%)
 Frame = -3

Query: 248 LVEYPAIPAPHLCMY*EVANISLSIWVLGFRRILDSFCQEWLFTCFQCMSAGSSTIKEMA 69
           L   PA+ AP   +  EV N ++++WV   R+++ +   EW  T  +  +A   TI + A
Sbjct: 64  LFRLPAVDAPSNDVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTA-YDTIGDDA 122

Query: 68  GSA 60
           G+A
Sbjct: 123 GAA 125