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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914341
Clone id YMU001_000057_G12
Library
Length 448
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000057_G12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTCCTTTAAATGTGAACCTCTAAAATCCAATTTGATTAATCAACAGGAGTAAGGCCT
TTATACTTTGCTTATGAAGAGCATTAAAAAATAGGTGAGTTTTCTGAAATTTGACTCTGT
ACAAATGATGATCCCAGCCATTCACAACACCAGCTTCGCTCGATAAGAAGTTGCCGCACA
TAAAGAGATATGCAAAGAAGCCACACCAAAAAATAAAAAGAGGCAATTCTTCAAATTGGG
CTATGTTTGCGAGTGATTCAGACACTCAACCGAACTGTCGATAAGAGTGTGTGAGGCCAC
TGCTGAGAGCCCATATATCACAAGCCATGATTGCCCCACTCTTAGACCCCAAAAGCATCC
ATGAGTCGCAATATACCGCATCATGTCCACCTTGAGCGGCGGTGCCAAAGCTGTTTGCCC
TAATTTTCATAGCTGTTACTCTGAATGG
■■Homology search results ■■ -
sp_hit_id P12679
Definition sp|P12679|PABB_KLEAE Para-aminobenzoate synthase component 1 OS=Klebsiella aerogenes
Align length 31
Score (bit) 32.0
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914341|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_G12.
         (448 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12679|PABB_KLEAE Para-aminobenzoate synthase component 1 OS=...    32   1.2  
sp|O01811|MEC6_CAEEL Mechanosensory abnormality protein 6 OS=Cae...    30   6.1  

>sp|P12679|PABB_KLEAE Para-aminobenzoate synthase component 1
           OS=Klebsiella aerogenes GN=pabB PE=1 SV=1
          Length = 451

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = -1

Query: 208 WCGFFAYLFMCGNFLSS-EAGVVNGWDHHLY 119
           WCG   YL  CGN  SS     +  W  HLY
Sbjct: 388 WCGSIGYLSFCGNMDSSITIRTLTAWQGHLY 418


>sp|O01811|MEC6_CAEEL Mechanosensory abnormality protein 6
           OS=Caenorhabditis elegans GN=mec-6 PE=1 SV=2
          Length = 377

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -1

Query: 406 GTAAQGGHDAVYCDSWMLLGSKSGAIMACDIWALSSGLTHSY 281
           G         V+ D  ML+GS  G ++ CD       LTHSY
Sbjct: 341 GATISASSSVVFTDEQMLIGSSFGRLLHCD-------LTHSY 375
tr_hit_id Q6BZG4
Definition tr|Q6BZG4|Q6BZG4_DEBHA DEHA2A01540p OS=Debaryomyces hansenii
Align length 91
Score (bit) 37.0
E-value 0.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914341|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_G12.
         (448 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6BZG4|Q6BZG4_DEBHA DEHA2A01540p OS=Debaryomyces hansenii GN=...    37   0.50 
tr|A3CM21|A3CM21_STRSV Putative uncharacterized protein OS=Strep...    35   1.4  
tr|A7I2B5|A7I2B5_CAMHC D12 class N6 adenine-specific DNA methylt...    35   1.9  
tr|B0W162|B0W162_CULQU Putative uncharacterized protein OS=Culex...    35   1.9  
tr|Q04ZE5|Q04ZE5_LEPBL Putative uncharacterized protein OS=Lepto...    34   3.2  
tr|Q04R36|Q04R36_LEPBJ Putative uncharacterized protein OS=Lepto...    34   3.2  
tr|Q6FB61|Q6FB61_ACIAD Putative metabolite transporter (MFS supe...    33   7.2  
tr|Q9M2C1|Q9M2C1_ARATH Putative uncharacterized protein F23N14_3...    33   7.2  
tr|Q81KH7|Q81KH7_BACAN Putative uncharacterized protein OS=Bacil...    33   9.4  
tr|Q6HCB2|Q6HCB2_BACHK Putative uncharacterized protein OS=Bacil...    33   9.4  
tr|B1UPC0|B1UPC0_BACAN Putative uncharacterized protein OS=Bacil...    33   9.4  
tr|B1GEP7|B1GEP7_BACAN Putative uncharacterized protein OS=Bacil...    33   9.4  
tr|B1EVT8|B1EVT8_BACAN Putative uncharacterized protein OS=Bacil...    33   9.4  
tr|B0QHR7|B0QHR7_BACAN Putative uncharacterized protein OS=Bacil...    33   9.4  
tr|B0PZD9|B0PZD9_BACAN Putative uncharacterized protein OS=Bacil...    33   9.4  
tr|B0ANL4|B0ANL4_BACAN Putative uncharacterized protein OS=Bacil...    33   9.4  
tr|Q4PP95|Q4PP95_LYSTE Delta-9 desaturase 2 OS=Lysiphlebus testa...    33   9.4  

>tr|Q6BZG4|Q6BZG4_DEBHA DEHA2A01540p OS=Debaryomyces hansenii
           GN=DEHA2A01540g PE=4 SV=2
          Length = 716

 Score = 37.0 bits (84), Expect = 0.50
 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
 Frame = -2

Query: 345 LRVGQSWLVI-YG-LSAVASHTLIDSSVECLNHSQT*PNLKNCLFLFFGVASLHISL--- 181
           LRVG    +  YG L     + L D S E   H  T PN ++ L L  G+  +H S+   
Sbjct: 40  LRVGPELEICGYGCLDHFLENDLYDHSWEMYGHILTNPNTQDIL-LDVGMPIIHKSIKYN 98

Query: 180 CAATSYRAKLVL*MAGIIICTESNFRKLTYF 88
           C   SY  K++L    + +  + N+R++ YF
Sbjct: 99  CRLLSYNGKILLIRPKLYLANDGNYREMRYF 129


>tr|A3CM21|A3CM21_STRSV Putative uncharacterized protein
           OS=Streptococcus sanguinis (strain SK36) GN=SSA_0795
           PE=4 SV=1
          Length = 121

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 13/37 (35%), Positives = 25/37 (67%)
 Frame = -1

Query: 232 EELPLFIFWCGFFAYLFMCGNFLSSEAGVVNGWDHHL 122
           E++ LF+F  G F +L+  GN ++++ GV   W++H+
Sbjct: 14  EQVFLFVFNSGIFVWLWKSGNEIANQLGVTAAWENHV 50


>tr|A7I2B5|A7I2B5_CAMHC D12 class N6 adenine-specific DNA
           methyltransferase OS=Campylobacter hominis (strain ATCC
           BAA-381 / LMG 19568 / NCTC 13146 / CH001A)
           GN=CHAB381_1100 PE=4 SV=1
          Length = 363

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -1

Query: 172 NFLSSEAGVVNGWDHHLYRVKFQKTHLFFNALHKQSIKALLLLINQIGF 26
           N +S  +G+  GW+  +Y  K +    FF+ + K   K +L+  N  GF
Sbjct: 266 NEISQVSGIAQGWNKSVYNKKTRAAEAFFDLISKLKAKFVLISFNNEGF 314


>tr|B0W162|B0W162_CULQU Putative uncharacterized protein OS=Culex
           quinquefasciatus GN=CpipJ_CPIJ000823 PE=4 SV=1
          Length = 896

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +2

Query: 182 KEICKEATPKNKKRQFFKLGYVCE*FRHSTELSIRVCEATAESPYITS-HDCPTLRPQKH 358
           KE+  +A  + KKR+  ++  + +  + +TELS R  E T   P ++S     +LR Q H
Sbjct: 411 KEMALKAELEQKKRELEQIAKMTQSMKKNTELSRRNTEVTTAQPKVSSVSSADSLRSQSH 470

Query: 359 P 361
           P
Sbjct: 471 P 471


>tr|Q04ZE5|Q04ZE5_LEPBL Putative uncharacterized protein
           OS=Leptospira borgpetersenii serovar Hardjo-bovis
           (strain L550) GN=LBL_2137 PE=4 SV=1
          Length = 221

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = -1

Query: 319 DIWALSSGLTHSYRQFG*VSESLANIAQFEELPLFIFWCGFFAYLFMCGNFLSSEAGVVN 140
           +I+  S  +  +Y  F  + +S  N  QF E+P+FI  CG   + F+ G  +  + G+V 
Sbjct: 22  NIFLFSGVILWAYVYFALIVDS--NRKQFVEMPVFIA-CGNIVWEFLWGFVIQEDMGIVL 78

Query: 139 GWDHHLYRVKFQKTHLFFNALHKQSIKALLLLIN 38
            W    Y++ F    L F  +++   K   + I+
Sbjct: 79  NWG---YKIAFLLDVLIFYNIYRFGQKQFKMSIS 109


>tr|Q04R36|Q04R36_LEPBJ Putative uncharacterized protein
           OS=Leptospira borgpetersenii serovar Hardjo-bovis
           (strain JB197) GN=LBJ_2143 PE=4 SV=1
          Length = 221

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = -1

Query: 319 DIWALSSGLTHSYRQFG*VSESLANIAQFEELPLFIFWCGFFAYLFMCGNFLSSEAGVVN 140
           +I+  S  +  +Y  F  + +S  N  QF E+P+FI  CG   + F+ G  +  + G+V 
Sbjct: 22  NIFLFSGVILWAYVYFALIVDS--NRKQFVEMPVFIA-CGNIVWEFLWGFVIQEDMGIVL 78

Query: 139 GWDHHLYRVKFQKTHLFFNALHKQSIKALLLLIN 38
            W    Y++ F    L F  +++   K   + I+
Sbjct: 79  NWG---YKIAFLLDVLIFYNIYRFGQKQFKMSIS 109


>tr|Q6FB61|Q6FB61_ACIAD Putative metabolite transporter (MFS
           superfamily) OS=Acinetobacter sp. (strain ADP1)
           GN=ACIAD1870 PE=4 SV=1
          Length = 387

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = -1

Query: 445 FRVTAMKIRANSFGTAAQGGHDAVYCDSWMLLGSKSGAIMACDIWALSSG 296
           F + AM++   +F    QG   A+Y   W  LG  SG+I+A   W + +G
Sbjct: 309 FHLIAMRVIFKNFSAQQQGRGQALYSTMWG-LGVASGSILAGQFWQMYTG 357


>tr|Q9M2C1|Q9M2C1_ARATH Putative uncharacterized protein F23N14_30
           (Fragment) OS=Arabidopsis thaliana GN=F23N14_30 PE=4
           SV=1
          Length = 224

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 12/22 (54%), Positives = 19/22 (86%)
 Frame = +2

Query: 182 KEICKEATPKNKKRQFFKLGYV 247
           ++ICKEATPKNKK +++ +G +
Sbjct: 114 EQICKEATPKNKKGRYYGVGSI 135


>tr|Q81KH7|Q81KH7_BACAN Putative uncharacterized protein OS=Bacillus
           anthracis GN=BA_5020 PE=4 SV=1
          Length = 65

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -2

Query: 216 LFFGVASLHISLCAATSYRAKLVL*MAGIIICTESNFRK 100
           +F+G+  L++SL   TS   K ++ + GI+ C  SNF K
Sbjct: 19  MFWGLVMLNVSLFEHTSETIKYIILITGIVFCIISNFFK 57


>tr|Q6HCB2|Q6HCB2_BACHK Putative uncharacterized protein OS=Bacillus
           thuringiensis subsp. konkukian GN=BT9727_4502 PE=4 SV=1
          Length = 68

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -2

Query: 216 LFFGVASLHISLCAATSYRAKLVL*MAGIIICTESNFRK 100
           +F+G+  L++SL   TS   K ++ + GI+ C  SNF K
Sbjct: 22  MFWGLVMLNVSLFEHTSETIKYIILITGIVFCIISNFFK 60