BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914347|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_H06.
         (557 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P50436|GLYA_METTM Serine hydroxymethyltransferase OS=Methanob...    31   4.7  
sp|P44902|MOBB_HAEIN Molybdopterin-guanine dinucleotide biosynth...    30   6.1  
sp|Q54PA9|PRPSA_DICDI Ribose-phosphate pyrophosphokinase A OS=Di...    30   8.0  
sp|Q8K9K1|FLGJ_BUCAP Putative flagellar protein flgJ homolog OS=...    30   8.0  

>sp|P50436|GLYA_METTM Serine hydroxymethyltransferase
           OS=Methanobacterium thermoautotrophicum (strain Marburg
           / DSM 2133) GN=glyA PE=3 SV=1
          Length = 424

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +3

Query: 402 TIQVCKALFEPDHPNLQHHKALLAVFGYYFLLRDAQGPKGKCEVP 536
           TI++ K LF  +H N+Q    ++A    +F   D   P    EVP
Sbjct: 74  TIELSKKLFRAEHANVQPTSGVVANLACFFATADVGDPMMAMEVP 118


>sp|P44902|MOBB_HAEIN Molybdopterin-guanine dinucleotide
           biosynthesis protein B OS=Haemophilus influenzae GN=mobB
           PE=1 SV=1
          Length = 178

 Score = 30.4 bits (67), Expect = 6.1
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = +3

Query: 150 QQPKPSLIDVLSQDQLDNLGVKSLTEAVLPDDIPVDMIH--EMLKNCPKVREHTLTAARL 323
           + PKP  +D L+Q     L    L E    + IP  ++H  EM K  P++ E+ L  A  
Sbjct: 86  ETPKPVSLDYLAQQFDRTLTDLVLVEGFKQEPIPKILLHRQEMTKPLPEIDEYVLAVA-- 143

Query: 324 GHAMGMTNFP 353
                 TN+P
Sbjct: 144 ------TNYP 147


>sp|Q54PA9|PRPSA_DICDI Ribose-phosphate pyrophosphokinase A
           OS=Dictyostelium discoideum GN=prsA PE=1 SV=1
          Length = 317

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
 Frame = +3

Query: 177 VLSQDQLDNLGVKSLTEAVLPDDIPVDMIHEMLKNCPKVR----EHTLTAA 317
           VLS D +  L   SLTE V+ + IP     E    CPK++     HTL+ A
Sbjct: 252 VLSGDAIQKLNESSLTELVITNTIP---HAEKAAKCPKIKTINIAHTLSEA 299


>sp|Q8K9K1|FLGJ_BUCAP Putative flagellar protein flgJ homolog
           OS=Buchnera aphidicola subsp. Schizaphis graminum
           GN=flgJ PE=3 SV=1
          Length = 106

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -1

Query: 233 DSFS*RFYTQVVQLVL*ENIYKRGLGLLHVKIE 135
           DS   RFYT++    + + I KRG+GL H+ ++
Sbjct: 63  DSNQSRFYTEIYDQKISKEIAKRGIGLTHIILQ 95

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914347|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_H06.
         (557 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A4QIB9|A4QIB9_CORGB Putative uncharacterized protein OS=Coryn...    36   1.2  
tr|A2BSG4|A2BSG4_PROMS Putative ADP-heptose synthase OS=Prochlor...    36   1.2  
tr|Q6A5X1|Q6A5X1_PROAC DeaD/DeaH box helicase OS=Propionibacteri...    35   3.6  
tr|Q3Z7R3|Q3Z7R3_DEHE1 Sensor protein OS=Dehalococcoides ethenog...    33   7.9  
tr|A0DI53|A0DI53_PARTE Chromosome undetermined scaffold_51, whol...    33   7.9  

>tr|A4QIB9|A4QIB9_CORGB Putative uncharacterized protein
           OS=Corynebacterium glutamicum (strain R) GN=cgR_2962
           PE=4 SV=1
          Length = 523

 Score = 36.2 bits (82), Expect = 1.2
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
 Frame = +3

Query: 72  SHMINH----EVPRLAKTKHKTKFSLNFHMQQPKPSLIDVLSQDQLDNLGVKSLTEAVLP 239
           +H +N      VP L K  ++T  +L F  Q+P  S +D L +     + +  L ++V P
Sbjct: 238 AHRLNQYSAQSVPALTKRFNETNKAL-FDGQKPHASQLDWLKKKSRHVIMMLDLEQSVRP 296

Query: 240 DDIPVDMIHEMLKNCPKVREHTL 308
           +D+P +   E+L   P+ R++ L
Sbjct: 297 NDLPQEEFQEILDQTPQNRKYRL 319


>tr|A2BSG4|A2BSG4_PROMS Putative ADP-heptose synthase
           OS=Prochlorococcus marinus (strain AS9601) GN=rfaE PE=4
           SV=1
          Length = 501

 Score = 36.2 bits (82), Expect = 1.2
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
 Frame = +3

Query: 90  EVPRLAKTKHKTKFSLNFHMQQPKPSLIDVL--SQDQLDNLGVKSLTEAVLPDDIPVDMI 263
           ++    KT HKTK S+ FH  +   +  ++L  S+D L N   K   +A+   +I VD +
Sbjct: 114 DIKETIKTLHKTKKSIFFHAGEISYASSELLTISEDNLKNKREKEFLKALERQNITVDCL 173

Query: 264 HEMLKNCPK 290
            E  KN  K
Sbjct: 174 REASKNIKK 182


>tr|Q6A5X1|Q6A5X1_PROAC DeaD/DeaH box helicase OS=Propionibacterium
           acnes GN=PPA2135 PE=4 SV=1
          Length = 892

 Score = 34.7 bits (78), Expect = 3.6
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
 Frame = +3

Query: 42  DDPKGKRKVMSH-----MINHEVPRLAKTKHKTKFSLNFHMQQPKPSLIDVLSQDQLDNL 206
           DDPK +RKV  H      +N+      K    T  +L+  M+  +  L+++L +D+    
Sbjct: 444 DDPKKRRKVQRHKPPEGFVNYSEETFTKLIESTPETLHARMRITEAMLLNLLQRDEDTAR 503

Query: 207 GVKSLTEAVLP 239
            V+ L EA  P
Sbjct: 504 AVQHLVEAATP 514


>tr|Q3Z7R3|Q3Z7R3_DEHE1 Sensor protein OS=Dehalococcoides
           ethenogenes (strain 195) GN=DET1016 PE=4 SV=1
          Length = 1258

 Score = 33.5 bits (75), Expect = 7.9
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
 Frame = +3

Query: 57  KRKVMSHMINHEVPRLAKTKHKTK-----FSLNFHMQQPKPSLIDVL--SQDQLDNLGVK 215
           KRK    ++     R   T  ++      + L F  +Q       +L  S D+L NL V+
Sbjct: 502 KRKQAEELLRESEARFRSTFDQSPIGAAIYDLGFKYRQVNDKFCKMLDYSDDELTNLSVR 561

Query: 216 SLTEAVLPDDIPVDMIH-EMLKN 281
            +T    PDD P D+IH   LKN
Sbjct: 562 DITH---PDDWPKDLIHLNQLKN 581


>tr|A0DI53|A0DI53_PARTE Chromosome undetermined scaffold_51, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00017091001 PE=4 SV=1
          Length = 520

 Score = 33.5 bits (75), Expect = 7.9
 Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +3

Query: 114 KHKTKFSLNFHMQQPKPSLIDVLSQDQLDNLGVKSLTEAVLPDDIPVDMIHEMLKNCPK- 290
           +   +  +N  ++Q    L D+L   Q +N  ++SL +  LP ++PV +  E+     + 
Sbjct: 434 ERNVEIEINLDVEQISYKLDDILKFQQQENSSLQSLKQLTLPVEVPVRLAKELDARFQRS 493

Query: 291 VREHTLTAARLGHAM 335
           +R+  +   R+G  M
Sbjct: 494 IRQLQIKQVRIGEQM 508