BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914351|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_H10.
         (351 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P32493|NCA1_YEAST Nuclear control of ATPase messenger RNA exp...    31   1.7  
sp|O76202|USP_CHOFU Protein ultraspiracle homolog OS=Choristoneu...    30   3.7  
sp|Q9WTR1|TRPV2_MOUSE Transient receptor potential cation channe...    30   3.7  
sp|Q68FD9|K1549_MOUSE UPF0606 protein KIAA1549 OS=Mus musculus G...    30   3.7  
sp|Q14789|GOGB1_HUMAN Golgin subfamily B member 1 OS=Homo sapien...    30   4.8  
sp|Q9WUD2|TRPV2_RAT Transient receptor potential cation channel ...    29   8.2  

>sp|P32493|NCA1_YEAST Nuclear control of ATPase messenger RNA
           expression protein, mitochondrial OS=Saccharomyces
           cerevisiae GN=NCA1 PE=1 SV=2
          Length = 518

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -3

Query: 190 FNILCQPNYSHKQPCSPYQASTLTPAQAALSNN-SPTKLSNS*HPLI 53
           +NILC+   +   P SP   + L    AA++N   P +  NS HP++
Sbjct: 239 YNILCKVEANENPPYSPTLVTALENLLAAINNRFFPGRCENSLHPIV 285


>sp|O76202|USP_CHOFU Protein ultraspiracle homolog OS=Choristoneura
           fumiferana GN=USP PE=2 SV=1
          Length = 472

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = -3

Query: 169 NYSHKQPCSPYQASTLTPAQAALSNNSPTKLSNS*HPLIGYHCSRDLQQFHIK 11
           N++   P  P Q  + +PA AA+    PT+   S + +    CS D+Q  +++
Sbjct: 19  NWARPAPPGPPQPQSASPAPAAMLQQLPTQSMQSLNHIPTVDCSLDMQWLNLE 71


>sp|Q9WTR1|TRPV2_MOUSE Transient receptor potential cation channel
           subfamily V member 2 OS=Mus musculus GN=Trpv2 PE=1 SV=2
          Length = 756

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +2

Query: 140 WRARLFVGIIWLTEYVEVCCSVLALATCLKNML 238
           WR RLF+ I ++  Y E+   V AL T L  +L
Sbjct: 452 WRRRLFIWISFMDSYFEILFLVQALLTVLSQVL 484


>sp|Q68FD9|K1549_MOUSE UPF0606 protein KIAA1549 OS=Mus musculus
           GN=Kiaa1549 PE=1 SV=2
          Length = 1799

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
 Frame = -2

Query: 212 ELILSSILQHTLSTKLFPQTALLSIPSVHTDSSTSCSLQQQSHKI----KQFLTSPHRLP 45
           +L++SS + H LS+          IPS H DSS S +  Q S          LTSP  +P
Sbjct: 388 DLVMSSSMIHLLSSV---------IPSTHFDSSFSLTANQNSPSFPAGKPSLLTSPSLVP 438

Query: 44  LQQRPA 27
             Q  A
Sbjct: 439 SAQSSA 444


>sp|Q14789|GOGB1_HUMAN Golgin subfamily B member 1 OS=Homo sapiens
           GN=GOLGB1 PE=1 SV=2
          Length = 3259

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = -2

Query: 176 STKLFPQTALLSIPSVHTDSSTSCSLQQQSHKIKQFLTSPHRLPLQQRPAA 24
           ++KL       ++ S  T       LQQ+S +I QFL   +RLPLQQ   A
Sbjct: 402 NSKLLQDKNEQAVQSAQTIQQLEDQLQQKSKEISQFL---NRLPLQQHETA 449


>sp|Q9WUD2|TRPV2_RAT Transient receptor potential cation channel
           subfamily V member 2 OS=Rattus norvegicus GN=Trpv2 PE=1
           SV=2
          Length = 761

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 140 WRARLFVGIIWLTEYVEVCCSVLALATCLKNML 238
           WR RLF+ I ++  Y E+   + AL T L  +L
Sbjct: 457 WRRRLFIWISFMDSYFEILFLLQALLTVLSQVL 489

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914351|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_H10.
         (351 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4RUT5|Q4RUT5_TETNG Chromosome 12 SCAF14993, whole genome sho...    34   4.1  
tr|B5VPJ0|B5VPJ0_YEAS6 YMR064Wp-like protein OS=Saccharomyces ce...    33   5.4  

>tr|Q4RUT5|Q4RUT5_TETNG Chromosome 12 SCAF14993, whole genome
           shotgun sequence OS=Tetraodon nigroviridis
           GN=GSTENG00028649001 PE=4 SV=1
          Length = 1439

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = -2

Query: 248 CYSKAYFSSK*QELILSSILQHTLSTKLFPQTA--LLSIPSVHTDSSTSCSLQQQSHKIK 75
           C  + +F +  Q  +L  + Q T     F  TA   L +P  HT SS S         ++
Sbjct: 165 CIGRRFFQASSQAALLRELRQKTQEVSNFHHTASQALRVPPPHTPSSDSRGSASPDSPLQ 224

Query: 74  QFLTSP 57
            +LTSP
Sbjct: 225 SYLTSP 230


>tr|B5VPJ0|B5VPJ0_YEAS6 YMR064Wp-like protein OS=Saccharomyces
           cerevisiae (strain AWRI1631) GN=AWRI1631_132030 PE=4
           SV=1
          Length = 518

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -3

Query: 190 FNILCQPNYSHKQPCSPYQASTLTPAQAALSNN-SPTKLSNS*HPLI 53
           ++ILC+   +   PCSP   + L    AA++N   P +  NS HP++
Sbjct: 239 YHILCKVEANENPPCSPTLVTALENLLAAINNRFFPGRCENSLHPIV 285