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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914384
Clone id YMU001_000058_C09
Library
Length 381
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000058_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCAAAGCCCCGGTGAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTG
TCGGGTAAGTTCCGACCCGCACGAAAGGCGTAACGATCTGGGCGCTGTCTCGGAGAAAGA
CTCGGTGAAATAGACATGTCTGTGAAGATGCGGACTACCCGCACCTGGACAGAAAGACCC
TATGAAGCTTCACTGTTCCCTGCGATTGGATTCGGGCTCTTCTTGCGCAGCTTAGGTGGA
AGGCAAAGAGGGCTCCTTTCCGGAGGGGCCTGAGCCATCAGTGAGATACCACTCTAGAAG
AACTAGAATTCTAACCTTGTGTCAAGAATTACGGACCAAGAGACAGTCCCAGGTAGACAG
TTTCTATGGGGCGTAGGCCTC
■■Homology search results ■■ -
sp_hit_id Q3BAI2
Definition sp|Q3BAI2|YCX91_PHAAO Uncharacterized protein ORF91 OS=Phalaenopsis aphrodite subsp. formosana
Align length 54
Score (bit) 103.0
E-value 2.0e-22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914384|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_C09.
         (381 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q3BAI2|YCX91_PHAAO Uncharacterized protein ORF91 OS=Phalaenop...   103   2e-22
sp|Q9FF80|SUVH1_ARATH Histone-lysine N-methyltransferase, H3 lys...    30   3.7  
sp|Q99ML8|UCN2_MOUSE Urocortin-2 OS=Mus musculus GN=Ucn2 PE=2 SV=1     30   4.8  
sp|Q3ABT4|SYFA_CARHZ Phenylalanyl-tRNA synthetase alpha chain OS...    30   4.8  
sp|Q9BLJ6|BAGS_BOMMO BAG domain-containing protein Samui OS=Bomb...    29   8.2  

>sp|Q3BAI2|YCX91_PHAAO Uncharacterized protein ORF91 OS=Phalaenopsis
           aphrodite subsp. formosana PE=4 SV=1
          Length = 91

 Score =  103 bits (258), Expect = 2e-22
 Identities = 50/54 (92%), Positives = 53/54 (98%)
 Frame = -2

Query: 164 VRVVRIFTDMSISPSLSPRQRPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGF 3
           ++VVRIFTDMSISPSLSPRQ PDRYAFRAGRNLPDKEFRYLRTV+VTAAVHRGF
Sbjct: 1   MQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVLVTAAVHRGF 54


>sp|Q9FF80|SUVH1_ARATH Histone-lysine N-methyltransferase, H3
           lysine-9 specific SUVH1 OS=Arabidopsis thaliana GN=SUVH1
           PE=2 SV=1
          Length = 670

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = -2

Query: 272 QAPPERS--PLCLPPKLRKKSPNPIAGNSEAS*GLSVQVRVVRIFTDMSISPSLSPRQRP 99
           Q PP+ +  P  + P    +SP+   GN+E   G +V+ R+          P   P  RP
Sbjct: 88  QQPPQHASEPSLVTPLRSFRSPDVSNGNAELE-GSTVKRRI----------PKKRPISRP 136

Query: 98  DRYAFRAGRNLPDKE 54
           +   F +G N+ D+E
Sbjct: 137 ENMNFESGINVADRE 151


>sp|Q99ML8|UCN2_MOUSE Urocortin-2 OS=Mus musculus GN=Ucn2 PE=2 SV=1
          Length = 112

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 159 PHLDRKTL*SFTVPCDWIRALLAQLRWKAKR 251
           P+LD + + S  VP   +R LL Q R+KA R
Sbjct: 66  PYLDTRVILSLDVPIGLLRILLEQARYKAAR 96


>sp|Q3ABT4|SYFA_CARHZ Phenylalanyl-tRNA synthetase alpha chain
           OS=Carboxydothermus hydrogenoformans (strain Z-2901 /
           DSM 6008) GN=pheS PE=3 SV=1
          Length = 340

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 17/36 (47%), Positives = 19/36 (52%)
 Frame = -2

Query: 170 VQVRVVRIFTDMSISPSLSPRQRPDRYAFRAGRNLP 63
           VQ R+V IFT M  S +  P    D Y F A  NLP
Sbjct: 113 VQHRIVEIFTSMGFSVATGPEIEKDYYNFEA-LNLP 147


>sp|Q9BLJ6|BAGS_BOMMO BAG domain-containing protein Samui OS=Bombyx
           mori GN=Samui PE=2 SV=1
          Length = 677

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
 Frame = -2

Query: 272 QAPPERSPLCLPPKLRKKSP-----NPIAGNSEAS*GLSVQVRVVRIFTDMSISPSLSPR 108
           Q PP +SP   PP  R+++P        + N   +  LS+Q  V+ + TD+    + +  
Sbjct: 348 QPPPPKSPQQQPPPQREQTPPQPKTQQPSSNDPITQILSIQTDVLNLMTDVE---NFTGT 404

Query: 107 QRPDRYAF 84
           ++  RY F
Sbjct: 405 KKDKRYLF 412
tr_hit_id B0PD28
Definition tr|B0PD28|B0PD28_9FIRM Putative uncharacterized protein OS=Anaerotruncus colihominis DSM 17241
Align length 115
Score (bit) 107.0
E-value 2.0e-22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914384|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_C09.
         (381 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0PD28|B0PD28_9FIRM Putative uncharacterized protein OS=Anaer...   107   2e-22
tr|B0P655|B0P655_9FIRM Putative uncharacterized protein OS=Anaer...   107   3e-22
tr|B0TIE7|B0TIE7_HELMI Putative uncharacterized protein OS=Helio...   105   1e-21
tr|A8SBJ8|A8SBJ8_9FIRM Putative uncharacterized protein OS=Faeca...   102   1e-20
tr|A8S7Q9|A8S7Q9_9FIRM Putative uncharacterized protein OS=Faeca...   102   1e-20
tr|A4EB58|A4EB58_9ACTN Putative uncharacterized protein OS=Colli...   101   2e-20
tr|A0Q208|A0Q208_CLONN Putative uncharacterized protein OS=Clost...   100   5e-20
tr|A0PXN7|A0PXN7_CLONN Putative uncharacterized protein OS=Clost...   100   5e-20
tr|B1BEE0|B1BEE0_CLOBO Putative uncharacterized protein OS=Clost...   100   5e-20
tr|B1BED5|B1BED5_CLOBO Putative uncharacterized protein OS=Clost...   100   5e-20
tr|B1BE06|B1BE06_CLOBO Putative uncharacterized protein OS=Clost...   100   5e-20
tr|B7R8W3|B7R8W3_9THEO Putative uncharacterized protein OS=Carbo...    99   1e-19
tr|A8S6F2|A8S6F2_9FIRM Putative uncharacterized protein OS=Faeca...    99   1e-19
tr|Q877Q8|Q877Q8_CLOTE Putative uncharacterized protein OS=Clost...    98   2e-19
tr|A7DZU9|A7DZU9_CLOSP Hypothetical CTC00065-like protein OS=Clo...    98   2e-19
tr|Q1MP75|Q1MP75_LAWIP Putative uncharacterized protein LI1148 O...    97   3e-19
tr|B1BEC2|B1BEC2_CLOBO Putative uncharacterized protein OS=Clost...    95   1e-18
tr|A1AII0|A1AII0_ECOK1 Putative uncharacterized protein OS=Esche...    94   4e-18
tr|B1RTR7|B1RTR7_CLOPE Putative uncharacterized protein OS=Clost...    93   6e-18
tr|B1RTP7|B1RTP7_CLOPE Putative uncharacterized protein (Fragmen...    93   6e-18
tr|B1RKU9|B1RKU9_CLOPE Putative uncharacterized protein OS=Clost...    93   6e-18
tr|B1RCB4|B1RCB4_CLOPE Putative uncharacterized protein OS=Clost...    93   6e-18
tr|B1BTI8|B1BTI8_CLOPE Putative uncharacterized protein OS=Clost...    93   6e-18
tr|B1BEX7|B1BEX7_CLOPE Putative uncharacterized protein OS=Clost...    93   6e-18
tr|B1BLN6|B1BLN6_CLOPE Putative uncharacterized protein OS=Clost...    92   2e-17
tr|B0MGJ9|B0MGJ9_9FIRM Putative uncharacterized protein OS=Anaer...    91   2e-17
tr|A8SSN6|A8SSN6_9FIRM Putative uncharacterized protein OS=Copro...    91   2e-17
tr|A7B6K2|A7B6K2_RUMGN Putative uncharacterized protein OS=Rumin...    91   2e-17
tr|A7B5W5|A7B5W5_RUMGN Putative uncharacterized protein OS=Rumin...    91   2e-17
tr|A4QMC2|A4QMC2_PINKO ORF82c OS=Pinus koraiensis PE=4 SV=1            91   3e-17

>tr|B0PD28|B0PD28_9FIRM Putative uncharacterized protein
           OS=Anaerotruncus colihominis DSM 17241 GN=ANACOL_02699
           PE=4 SV=1
          Length = 170

 Score =  107 bits (268), Expect = 2e-22
 Identities = 67/115 (58%), Positives = 72/115 (62%)
 Frame = -2

Query: 347 TVSWSVILDTRLEF*FF*SGISLMAQAPPERSPLCLPPKLRKKSPNPIAGNSEAS*GLSV 168
           T+S   I   RLEF    SGI   A A      LCLPP L  K  NPI   S+A  GLSV
Sbjct: 29  TLSPDRIHGRRLEFQHLKSGIPTAAPATLACCLLCLPPILYMKYRNPILSCSKAPWGLSV 88

Query: 167 QVRVVRIFTDMSISPSLSPRQRPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGF 3
             RV  IFT  +ISP    RQ PDRY  RAG+NLPDKEFRYLRTVIVTAAV+RGF
Sbjct: 89  LSRVTGIFTGTTISPGGLLRQCPDRYTIRAGQNLPDKEFRYLRTVIVTAAVYRGF 143


>tr|B0P655|B0P655_9FIRM Putative uncharacterized protein
           OS=Anaerotruncus colihominis DSM 17241 GN=ANACOL_00227
           PE=4 SV=1
          Length = 170

 Score =  107 bits (267), Expect = 3e-22
 Identities = 67/115 (58%), Positives = 72/115 (62%)
 Frame = -2

Query: 347 TVSWSVILDTRLEF*FF*SGISLMAQAPPERSPLCLPPKLRKKSPNPIAGNSEAS*GLSV 168
           T+S   I   RLEF    SGI   A A      LCLPP L  K  NPI   S+A  GLSV
Sbjct: 29  TLSPDRIHGRRLEFQHLKSGIPTPAPATLACCLLCLPPILYMKYRNPILSCSKAPWGLSV 88

Query: 167 QVRVVRIFTDMSISPSLSPRQRPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGF 3
             RV  IFT  +ISP    RQ PDRY  RAG+NLPDKEFRYLRTVIVTAAV+RGF
Sbjct: 89  LSRVTGIFTGTTISPGGLLRQCPDRYTIRAGQNLPDKEFRYLRTVIVTAAVYRGF 143


>tr|B0TIE7|B0TIE7_HELMI Putative uncharacterized protein
           OS=Heliobacterium modesticaldum (strain ATCC 51547 /
           Ice1) GN=Helmi_22630 PE=4 SV=1
          Length = 147

 Score =  105 bits (262), Expect = 1e-21
 Identities = 57/80 (71%), Positives = 62/80 (77%)
 Frame = -2

Query: 242 LPPKLRKKSPNPIAGNSEAS*GLSVQVRVVRIFTDMSISPSLSPRQRPDRYAFRAGRNLP 63
           LPP L K   NP++G S+A  GLSV  +V R FT  SISPS S RQ PDRYAFRAGRNLP
Sbjct: 64  LPPILYKTHQNPMSGYSKALRGLSVLSQVTRFFTGRSISPSPSLRQCPDRYAFRAGRNLP 123

Query: 62  DKEFRYLRTVIVTAAVHRGF 3
           DKEFRYLRTVIVTAAV+ GF
Sbjct: 124 DKEFRYLRTVIVTAAVYWGF 143


>tr|A8SBJ8|A8SBJ8_9FIRM Putative uncharacterized protein
           OS=Faecalibacterium prausnitzii M21/2
           GN=FAEPRAM212_01694 PE=4 SV=1
          Length = 267

 Score =  102 bits (253), Expect = 1e-20
 Identities = 61/115 (53%), Positives = 72/115 (62%)
 Frame = -2

Query: 347 TVSWSVILDTRLEF*FF*SGISLMAQAPPERSPLCLPPKLRKKSPNPIAGNSEAS*GLSV 168
           T+S ++I   RLEF +   GI       P+    C+P  L  +  NPI G S+A  GLSV
Sbjct: 29  TMSPALIQRRRLEFQYRKDGIPTATPQMPKHLFPCVPSILCMQHRNPILGYSKAPWGLSV 88

Query: 167 QVRVVRIFTDMSISPSLSPRQRPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGF 3
             RV  IFT  +ISP    RQ P+ YAF AG+NLPDKEFRYLRTVIVTAAVH GF
Sbjct: 89  LSRVTGIFTGTTISPGGLSRQCPNHYAFHAGQNLPDKEFRYLRTVIVTAAVHWGF 143


>tr|A8S7Q9|A8S7Q9_9FIRM Putative uncharacterized protein
           OS=Faecalibacterium prausnitzii M21/2
           GN=FAEPRAM212_00540 PE=4 SV=1
          Length = 267

 Score =  102 bits (253), Expect = 1e-20
 Identities = 61/115 (53%), Positives = 72/115 (62%)
 Frame = -2

Query: 347 TVSWSVILDTRLEF*FF*SGISLMAQAPPERSPLCLPPKLRKKSPNPIAGNSEAS*GLSV 168
           T+S ++I   RLEF +   GI       P+    C+P  L  +  NPI G S+A  GLSV
Sbjct: 29  TMSPALIQRRRLEFQYRKDGIPTATPQMPKHLFPCVPSILCMQHRNPILGYSKAPWGLSV 88

Query: 167 QVRVVRIFTDMSISPSLSPRQRPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGF 3
             RV  IFT  +ISP    RQ P+ YAF AG+NLPDKEFRYLRTVIVTAAVH GF
Sbjct: 89  LSRVTGIFTGTTISPGGLSRQCPNHYAFHAGQNLPDKEFRYLRTVIVTAAVHWGF 143


>tr|A4EB58|A4EB58_9ACTN Putative uncharacterized protein
           OS=Collinsella aerofaciens ATCC 25986 GN=COLAER_01673
           PE=4 SV=1
          Length = 212

 Score =  101 bits (252), Expect = 2e-20
 Identities = 68/139 (48%), Positives = 75/139 (53%), Gaps = 14/139 (10%)
 Frame = -2

Query: 380 RPTPHRNCLPGTVSWSVILDTRLEF*FF*SGISLMAQ--------------APPERSPLC 243
           R  P  NC PGTV   V             G+ L  +              APP+R   C
Sbjct: 80  RRPPQSNCPPGTVPEPV------------DGLGLGRRSREGSIPRAAPRGLAPPDR---C 124

Query: 242 LPPKLRKKSPNPIAGNSEAS*GLSVQVRVVRIFTDMSISPSLSPRQRPDRYAFRAGRNLP 63
           L P L  +   P+   SE S GLSV  RV RIFT  +ISP    RQRP R AFRAGRNLP
Sbjct: 125 LLPILYTRDQRPMPSCSEGSRGLSVLPRVSRIFTTSAISPGPWSRQRPSRCAFRAGRNLP 184

Query: 62  DKEFRYLRTVIVTAAVHRG 6
           DKEFRYLRTVIVTAAV+RG
Sbjct: 185 DKEFRYLRTVIVTAAVYRG 203


>tr|A0Q208|A0Q208_CLONN Putative uncharacterized protein
           OS=Clostridium novyi (strain NT) GN=NT01CX_0152 PE=4
           SV=1
          Length = 213

 Score =  100 bits (248), Expect = 5e-20
 Identities = 60/106 (56%), Positives = 72/106 (67%), Gaps = 2/106 (1%)
 Frame = -2

Query: 317 RLEF*FF*SGISLMAQAPPERSP--LCLPPKLRKKSPNPIAGNSEAS*GLSVQVRVVRIF 144
           +LEF ++  GI  M   PP+ +P  L LPP L ++  N +   S+A  GLSVQ RV  IF
Sbjct: 107 QLEFQYYQGGIPRMT--PPKLTPWFLSLPPILYRQYRNSMLSYSKALRGLSVQPRVASIF 164

Query: 143 TDMSISPSLSPRQRPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRG 6
           T  +ISP L PRQ  + YA RAGRNLPDKEFRYLRTVIVTAAV+ G
Sbjct: 165 TCTTISPDLLPRQCSNHYAIRAGRNLPDKEFRYLRTVIVTAAVYWG 210


>tr|A0PXN7|A0PXN7_CLONN Putative uncharacterized protein
           OS=Clostridium novyi (strain NT) GN=NT01CX_0251 PE=4
           SV=1
          Length = 213

 Score =  100 bits (248), Expect = 5e-20
 Identities = 60/106 (56%), Positives = 72/106 (67%), Gaps = 2/106 (1%)
 Frame = -2

Query: 317 RLEF*FF*SGISLMAQAPPERSP--LCLPPKLRKKSPNPIAGNSEAS*GLSVQVRVVRIF 144
           +LEF ++  GI  M   PP+ +P  L LPP L ++  N +   S+A  GLSVQ RV  IF
Sbjct: 107 QLEFQYYQGGIPRMT--PPKLTPWLLSLPPILYRQYRNSMLSYSKALRGLSVQPRVASIF 164

Query: 143 TDMSISPSLSPRQRPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRG 6
           T  +ISP L PRQ  + YA RAGRNLPDKEFRYLRTVIVTAAV+ G
Sbjct: 165 TCTTISPDLLPRQCSNHYAIRAGRNLPDKEFRYLRTVIVTAAVYWG 210


>tr|B1BEE0|B1BEE0_CLOBO Putative uncharacterized protein
           OS=Clostridium botulinum C str. Eklund GN=CBC_A1890 PE=4
           SV=1
          Length = 210

 Score =  100 bits (248), Expect = 5e-20
 Identities = 60/106 (56%), Positives = 72/106 (67%), Gaps = 2/106 (1%)
 Frame = -2

Query: 317 RLEF*FF*SGISLMAQAPPERSP--LCLPPKLRKKSPNPIAGNSEAS*GLSVQVRVVRIF 144
           +LEF ++  GI  M   PP+ +P  L LPP L ++  N +   S+A  GLSVQ RV  IF
Sbjct: 107 QLEFQYYQGGIPRMT--PPKLTPWFLSLPPILYRQYRNSMLSYSKALRGLSVQPRVASIF 164

Query: 143 TDMSISPSLSPRQRPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRG 6
           T  +ISP L PRQ  + YA RAGRNLPDKEFRYLRTVIVTAAV+ G
Sbjct: 165 TCTTISPDLLPRQCSNHYAIRAGRNLPDKEFRYLRTVIVTAAVYWG 210


>tr|B1BED5|B1BED5_CLOBO Putative uncharacterized protein
           OS=Clostridium botulinum C str. Eklund GN=CBC_A1888 PE=4
           SV=1
          Length = 182

 Score =  100 bits (248), Expect = 5e-20
 Identities = 60/106 (56%), Positives = 72/106 (67%), Gaps = 2/106 (1%)
 Frame = -2

Query: 317 RLEF*FF*SGISLMAQAPPERSP--LCLPPKLRKKSPNPIAGNSEAS*GLSVQVRVVRIF 144
           +LEF ++  GI  M   PP+ +P  L LPP L ++  N +   S+A  GLSVQ RV  IF
Sbjct: 76  QLEFQYYQGGIPRMT--PPKLTPWFLSLPPILYRQYRNSMLSYSKALRGLSVQPRVASIF 133

Query: 143 TDMSISPSLSPRQRPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRG 6
           T  +ISP L PRQ  + YA RAGRNLPDKEFRYLRTVIVTAAV+ G
Sbjct: 134 TCTTISPDLLPRQCSNHYAIRAGRNLPDKEFRYLRTVIVTAAVYWG 179