BP914388
Clone id YMU001_000058_D01
Library
Length 524
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000058_D01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGGTACTCCAGATGCATTGCGGCAGCTACTAATGTGTCCAGGATGGCTGGTGGTCCAGTT
TACTTTTGAGGCAAGCATCTGCAGTGGATTGAGGTGGTAAATGGTAAAGCTCTACCTTGT
TTATACATAGAAAGCTGAAGCAGTTATCAGTTTTTGAAAGTCATTTCTCGCAAAGTTGAC
AGTCTTTTGCGTGGAACTTTTGGTCAAGGAGAAGTGTACAGCTTGGAACCTTGCCATGCT
GGCAAACCATTTGACGACTCCTTGATGTTTTAACGAATTGAAAGATTCCATTTAAGTTTT
CATGAAATCAAGTATAAGGTGGATGCCGGAAGAGCTTTGCTCTTGGCCTCTTTGACCTAA
AGAAATATAGTGCTTTTTAGCATGGAGCACAAGGTTTTGTTGGTGCTCTTAGCTTGCCCA
CTGGGTTGCGGGTGGTAGGGTGCTGATTTCCTCAATGTGCCATCATGATAGAGCAATGTA
ACTCATTCTTAATCGACATTCCAAAATTGTCAAAGATTCATAGA
■■Homology search results ■■ -
sp_hit_id Q24292
Definition sp|Q24292|DS_DROME Protein dachsous OS=Drosophila melanogaster
Align length 49
Score (bit) 32.3
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914388|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_D01.
(524 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q24292|DS_DROME Protein dachsous OS=Drosophila melanogaster G... 32 1.4
sp|Q28E95|SH3R1_XENTR Putative E3 ubiquitin-protein ligase SH3RF... 30 9.1

>sp|Q24292|DS_DROME Protein dachsous OS=Drosophila melanogaster GN=ds
PE=1 SV=3
Length = 3503

Score = 32.3 bits (72), Expect = 1.4
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = -3

Query: 456 IEEISTLPPATQWAS*EHQQNLVLHAKKHYISLGQRGQEQSSSGIHLIL 310
IE + +LPPAT+ + NL++ AK H GQ ++SS +HLI+
Sbjct: 1612 IELVKSLPPATEDVEKGGRFNLIIGAKDH----GQPEPKKSSLNLHLIV 1656


>sp|Q28E95|SH3R1_XENTR Putative E3 ubiquitin-protein ligase SH3RF1
OS=Xenopus tropicalis GN=sh3rf1 PE=2 SV=1
Length = 861

Score = 29.6 bits (65), Expect = 9.1
Identities = 30/103 (29%), Positives = 38/103 (36%), Gaps = 11/103 (10%)
Frame = -2

Query: 457 H*GNQHPTTRNPVGKLRAPTK--PCAPC*KALYFFRSKRPRAKLF---------RHPPYT 311
H G Q R+P P + P PC KALY + K P F R
Sbjct: 115 HGGQQRIQARSP------PVRGVPQLPCAKALYNYEGKEPGDLKFNKGDIIVLRRQVDEN 168

Query: 310 *FHENLNGIFQFVKTSRSRQMVCQHGKVPSCTLLLDQKFHAKD 182
+H +NGI F T+ + + P C L D F KD
Sbjct: 169 WYHGEINGIHGFFPTNFVQIIKPLPQPPPQCKALYD--FEVKD 209


tr_hit_id A5BWP0
Definition tr|A5BWP0|A5BWP0_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 51
Score (bit) 38.1
E-value 0.27
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914388|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_D01.
(524 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5BWP0|A5BWP0_VITVI Putative uncharacterized protein OS=Vitis... 38 0.27
tr|Q0D712|Q0D712_ORYSJ Os07g0410500 protein OS=Oryza sativa subs... 37 0.78
tr|A5C426|A5C426_VITVI Putative uncharacterized protein OS=Vitis... 37 0.78
tr|Q2R664|Q2R664_ORYSJ Retrotransposon protein, putative, unclas... 36 1.0
tr|Q9LMV1|Q9LMV1_ARATH F5M15.26 OS=Arabidopsis thaliana PE=4 SV=1 36 1.3
tr|Q6L4N0|Q6L4N0_ORYSJ Putative uncharacterized protein P0530H10... 36 1.3
tr|Q53KZ1|Q53KZ1_ORYSJ Retrotransposon protein, putative, unclas... 36 1.3
tr|Q53JT7|Q53JT7_ORYSJ Retrotransposon protein, putative, unclas... 36 1.3
tr|Q53J76|Q53J76_ORYSJ Retrotransposon protein, putative, unclas... 36 1.3
tr|Q2QTE2|Q2QTE2_ORYSJ Retrotransposon protein, putative, unclas... 36 1.3
tr|A5AS76|A5AS76_VITVI Putative uncharacterized protein OS=Vitis... 36 1.3
tr|Q7XWW3|Q7XWW3_ORYSJ OSJNBb0058J09.16 protein OS=Oryza sativa ... 35 1.7
tr|Q75H60|Q75H60_ORYSJ Putative reverse transcriptase OS=Oryza s... 35 1.7
tr|Q6UUB2|Q6UUB2_ORYSJ Putative uncharacterized protein OS=Oryza... 35 1.7
tr|Q6AU29|Q6AU29_ORYSJ Putative integrase (Retrotransposon prote... 35 1.7
tr|Q2R3E6|Q2R3E6_ORYSJ Os11g0524800 protein OS=Oryza sativa subs... 35 1.7
tr|Q10GV1|Q10GV1_ORYSJ Retrotransposon protein, putative, Ty3-gy... 35 1.7
tr|A5BSX2|A5BSX2_VITVI Putative uncharacterized protein OS=Vitis... 35 1.7
tr|A5BAW1|A5BAW1_VITVI Putative uncharacterized protein OS=Vitis... 35 1.7
tr|A5ANF4|A5ANF4_VITVI Putative uncharacterized protein OS=Vitis... 35 1.7
tr|A5AMM8|A5AMM8_VITVI Putative uncharacterized protein OS=Vitis... 35 1.7
tr|A5C3U5|A5C3U5_VITVI Putative uncharacterized protein OS=Vitis... 35 2.3
tr|A5C0A7|A5C0A7_VITVI Putative uncharacterized protein OS=Vitis... 35 2.3
tr|A5BY14|A5BY14_VITVI Putative uncharacterized protein OS=Vitis... 35 2.3
tr|A5BRN3|A5BRN3_VITVI Putative uncharacterized protein OS=Vitis... 35 2.3
tr|B4P2W3|B4P2W3_DROYA GE15963 OS=Drosophila yakuba GN=GE15963 P... 35 2.3
tr|Q8S6W4|Q8S6W4_ORYSA Putative pol polyprotein OS=Oryza sativa ... 35 3.0
tr|Q8LM84|Q8LM84_ORYSJ Putative retroelement OS=Oryza sativa sub... 35 3.0
tr|Q53NA3|Q53NA3_ORYSJ Retrotransposon protein, putative, unclas... 35 3.0
tr|Q2R4I0|Q2R4I0_ORYSJ Retrotransposon protein, putative, unclas... 35 3.0

>tr|A5BWP0|A5BWP0_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_027782 PE=4 SV=1
Length = 887

Score = 38.1 bits (87), Expect = 0.27
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = -1

Query: 446 SAPYHPQPSGQAKSTNKTLCSMLKSTIFL*VKEAKSKALPASTLYLIS*KL 294
S P++PQ +GQAK+TNKTL + LK + ++AK K + LI KL
Sbjct: 782 STPHYPQTNGQAKATNKTLITALKKRL----EQAKGKWVEELPYVLIRKKL 828


>tr|Q0D712|Q0D712_ORYSJ Os07g0410500 protein OS=Oryza sativa subsp.
japonica GN=Os07g0410500 PE=4 SV=1
Length = 563

Score = 36.6 bits (83), Expect = 0.78
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = -1

Query: 446 SAPYHPQPSGQAKSTNKTLCSMLKSTI 366
+ PYHPQ SGQAK+ NK + ++L++T+
Sbjct: 532 ATPYHPQTSGQAKTLNKQIKNILQNTV 558


>tr|A5C426|A5C426_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_012467 PE=4 SV=1
Length = 799

Score = 36.6 bits (83), Expect = 0.78
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = -1

Query: 446 SAPYHPQPSGQAKSTNKTLCSMLKSTIFL*VKEAKSK 336
S P +PQ +GQAK+TNKTL + LK + +EAK K
Sbjct: 730 STPRYPQSNGQAKATNKTLLNALKKML----EEAKGK 762


>tr|Q2R664|Q2R664_ORYSJ Retrotransposon protein, putative,
unclassified OS=Oryza sativa subsp. japonica
GN=LOC_Os11g22130 PE=4 SV=1
Length = 268

Score = 36.2 bits (82), Expect = 1.0
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = -1

Query: 446 SAPYHPQPSGQAKSTNKTLCSMLKSTI 366
+APYHPQ SGQA+ +NK + ++L+ T+
Sbjct: 101 AAPYHPQTSGQAEMSNKQIKNILQKTV 127


>tr|Q9LMV1|Q9LMV1_ARATH F5M15.26 OS=Arabidopsis thaliana PE=4 SV=1
Length = 1838

Score = 35.8 bits (81), Expect = 1.3
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = -1

Query: 455 LRKSAPYHPQPSGQAKSTNKTLCSMLKSTI 366
L KS P +PQ +GQA++TNKT+ S LK +
Sbjct: 1640 LNKSTPRYPQGNGQAEATNKTILSGLKKRL 1669


>tr|Q6L4N0|Q6L4N0_ORYSJ Putative uncharacterized protein P0530H10.3
(Putative uncharacterized protein OSJNOa0153K02.5)
OS=Oryza sativa subsp. japonica GN=P0530H10.3 PE=4 SV=1
Length = 903

Score = 35.8 bits (81), Expect = 1.3
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = -1

Query: 446 SAPYHPQPSGQAKSTNKTLCSMLKSTI 366
+ PYHPQ SGQA+++NK + ++L+ TI
Sbjct: 822 ATPYHPQTSGQAETSNKQIKNILQKTI 848


>tr|Q53KZ1|Q53KZ1_ORYSJ Retrotransposon protein, putative,
unclassified OS=Oryza sativa subsp. japonica
GN=LOC_Os11g25720 PE=4 SV=1
Length = 321

Score = 35.8 bits (81), Expect = 1.3
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = -1

Query: 446 SAPYHPQPSGQAKSTNKTLCSMLKSTIFL*VKEAKSKALPASTLY 312
+ PYHPQ SGQA+++NK + ++L+ T+ K K+K A Y
Sbjct: 169 ATPYHPQTSGQAETSNKQIKNILQKTVNEMGKAWKNKLSDALWAY 213


>tr|Q53JT7|Q53JT7_ORYSJ Retrotransposon protein, putative,
unclassified OS=Oryza sativa subsp. japonica
GN=LOC_Os11g23130 PE=4 SV=1
Length = 399

Score = 35.8 bits (81), Expect = 1.3
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = -1

Query: 446 SAPYHPQPSGQAKSTNKTLCSMLKSTI 366
+ PYHPQ SGQA+++NK + ++L+ TI
Sbjct: 127 ATPYHPQTSGQAETSNKQIKNILQKTI 153


>tr|Q53J76|Q53J76_ORYSJ Retrotransposon protein, putative,
unclassified OS=Oryza sativa subsp. japonica
GN=LOC_Os11g22780 PE=4 SV=1
Length = 248

Score = 35.8 bits (81), Expect = 1.3
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = -1

Query: 446 SAPYHPQPSGQAKSTNKTLCSMLKSTIFL*VKEAKSKALPASTLY 312
+ PYHPQ SGQA+++NK + ++L+ T+ K K+K A Y
Sbjct: 29 ATPYHPQTSGQAETSNKQIKNILQKTVDEMGKSWKNKLPDALWAY 73


>tr|Q2QTE2|Q2QTE2_ORYSJ Retrotransposon protein, putative,
unclassified OS=Oryza sativa subsp. japonica
GN=LOC_Os12g19950 PE=4 SV=1
Length = 270

Score = 35.8 bits (81), Expect = 1.3
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = -1

Query: 446 SAPYHPQPSGQAKSTNKTLCSMLKSTI 366
+ PYHPQ SGQA+++NK + ++L+ TI
Sbjct: 127 ATPYHPQTSGQAETSNKQIKNILQKTI 153