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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914397
Clone id YMU001_000058_D11
Library
Length 526
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000058_D11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATCTTGATCCCCTTTTAAGGGCCAATTGTTTGAGAGTGCCCGTTGTGCATTGACGTTGTC
CATTTTTCTTTTTTTGCTATCCTGCATGCCAAAGCGCCTGGCTTTACGATTCGCAACCAG
ACGATGTGATTAAAAGCATCATGACCATCCATAAGAGGAAAAATCCTCAGGATATACAAG
AAACAAAGTTTCACTCACTGGAGTCGAAAGGGTGACTTCGGGTACCCATTCAGAGCGCCA
TTCAATCTTGTGTTGCAGGCAGATGTCCTTCATAAGTTTCAATTTGATCTTTCCACTCGG
AGGTTGCATTGACATGAGCTCAATAATCTGTTTATGGACGGTACATGAGACAAACTTATA
GTTTTGGATTCTCGTCTATCTTACTGTGAATGCATGACATACTTCTCTGCTGACTCCACA
ATCGGGTTTTATTTCATTTGCAGCAACAGTGAACTCCTTGCCGTACTTTATGGTGAGCAT
GTCTTTGGCTTCAGTCAATTCTGGTAAATCGGAACATCGCGGTGCA
■■Homology search results ■■ -
sp_hit_id A2C3L3
Definition sp|A2C3L3|FOLD_PROM1 Bifunctional protein folD OS=Prochlorococcus marinus (strain NATL1A)
Align length 36
Score (bit) 33.1
E-value 0.77
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914397|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_D11.
         (513 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A2C3L3|FOLD_PROM1 Bifunctional protein folD OS=Prochlorococcu...    33   0.77 
sp|Q46K05|FOLD_PROMT Bifunctional protein folD OS=Prochlorococcu...    32   1.7  
sp|A6NCI8|CB078_HUMAN Uncharacterized protein C2orf78 OS=Homo sa...    32   1.7  
sp|P31381|FUN26_YEAST Nucleoside transporter FUN26 OS=Saccharomy...    30   6.7  
sp|Q54I39|IST1L_DICDI IST1-like protein OS=Dictyostelium discoid...    30   8.5  

>sp|A2C3L3|FOLD_PROM1 Bifunctional protein folD OS=Prochlorococcus
           marinus (strain NATL1A) GN=folD PE=3 SV=1
          Length = 303

 Score = 33.1 bits (74), Expect = 0.77
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -2

Query: 506 RCSDLPELTEAKDMLTIKYGKEFTVAANEIKPDCGV 399
           R  DLP LT+  D+L +  GK + +  N +  +C V
Sbjct: 191 RTKDLPSLTKEADLLVVAAGKPYLIGKNHVSENCVV 226


>sp|Q46K05|FOLD_PROMT Bifunctional protein folD OS=Prochlorococcus
           marinus (strain NATL2A) GN=folD PE=3 SV=1
          Length = 303

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 506 RCSDLPELTEAKDMLTIKYGKEFTVAANEIKPDCGV 399
           +  DLP LT+  D+L +  GK + +  N +  +C V
Sbjct: 191 KTKDLPSLTKEADLLVVAAGKPYLIGENHVSENCVV 226


>sp|A6NCI8|CB078_HUMAN Uncharacterized protein C2orf78 OS=Homo
           sapiens GN=C2orf78 PE=4 SV=2
          Length = 892

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
 Frame = -2

Query: 362 TRIQNYKFVSCT------VHKQIIELMSMQPPSGKIKLKLMKDICLQHKIEWRSEWVPEV 201
           +R   YK  SC+      V   +  L S+  P  +    L++D  LQ +  WR   VPE 
Sbjct: 780 SRPSAYKTSSCSSLQREPVSTAVTSLRSLPKPQNQF---LIQDFSLQPR-PWRKPTVPEP 835

Query: 200 TLSTPVSE 177
            +STP++E
Sbjct: 836 VMSTPITE 843


>sp|P31381|FUN26_YEAST Nucleoside transporter FUN26 OS=Saccharomyces
           cerevisiae GN=FUN26 PE=1 SV=1
          Length = 517

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 400 TPQSGFISFAATVNSLPYFMVSMSLASVNSGKSEHRGA 513
           TP+  FI     V ++P F++  ++ S +SG  EH G+
Sbjct: 407 TPRKTFIYSLLRVAAIPLFLMFTAITSSSSGDEEHNGS 444


>sp|Q54I39|IST1L_DICDI IST1-like protein OS=Dictyostelium discoideum
           GN=DDB_G0289029 PE=3 SV=1
          Length = 369

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 1/104 (0%)
 Frame = -2

Query: 494 LPELTEAKDMLTIKYGKEFTVAANEIKPDCGVSREVCHAFTVR*TRIQNYKFVSCTVHKQ 315
           +PEL + K+ L  KYGK     AN            CH               S  V+ +
Sbjct: 114 IPELEQIKNQLKAKYGKGLENEAN------------CHC--------------STHVNPK 147

Query: 314 IIELMSMQPPSGKIKLKLMKDICLQHKIEW-RSEWVPEVTLSTP 186
           I+  +S   P   I  + + +I  +  ++W  S++ P   L  P
Sbjct: 148 IVHKLSYATPDPSIIFQTLSEIAEKFNVDWCGSDYPPPPQLIMP 191
tr_hit_id A9RUY0
Definition tr|A9RUY0|A9RUY0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 109
Score (bit) 84.7
E-value 2.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914397|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_D11.
         (513 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RUY0|A9RUY0_PHYPA Predicted protein (Fragment) OS=Physcomit...    85   2e-15
tr|A9SHB4|A9SHB4_PHYPA Predicted protein (Fragment) OS=Physcomit...    82   1e-14
tr|B4FSB7|B4FSB7_MAIZE Putative uncharacterized protein OS=Zea m...    81   3e-14
tr|A7L4A9|A7L4A9_CARPA Putative uncharacterized protein OS=Caric...    81   3e-14
tr|Q6Z4T7|Q6Z4T7_ORYSJ Os08g0175200 protein OS=Oryza sativa subs...    79   1e-13
tr|B0FZD6|B0FZD6_CARPA Putative uncharacterized protein OS=Caric...    79   1e-13
tr|A7L4A4|A7L4A4_CARPA Putative uncharacterized protein OS=Caric...    79   1e-13
tr|A3BQ54|A3BQ54_ORYSJ Putative uncharacterized protein OS=Oryza...    79   1e-13
tr|A2YRR3|A2YRR3_ORYSI Putative uncharacterized protein OS=Oryza...    79   1e-13
tr|A7QLT5|A7QLT5_VITVI Chromosome chr18 scaffold_121, whole geno...    78   3e-13
tr|A5B547|A5B547_VITVI Putative uncharacterized protein OS=Vitis...    78   3e-13
tr|Q7XA80|Q7XA80_ARATH At1g34220 (Putative uncharacterized prote...    77   6e-13
tr|Q3LHL2|Q3LHL2_SOLTU Putative uncharacterized protein PPS5 OS=...    75   1e-12
tr|Q9XIC8|Q9XIC8_ARATH F23M19.10 OS=Arabidopsis thaliana GN=At1g...    73   7e-12
tr|A7R7M9|A7R7M9_VITVI Chromosome undetermined scaffold_1894, wh...    72   2e-11
tr|A7R1D0|A7R1D0_VITVI Chromosome undetermined scaffold_345, who...    72   2e-11
tr|A7P388|A7P388_VITVI Chromosome chr1 scaffold_5, whole genome ...    70   5e-11
tr|B4F8A8|B4F8A8_MAIZE Putative uncharacterized protein OS=Zea m...    70   6e-11
tr|O81804|O81804_ARATH Putative uncharacterized protein AT4g3573...    69   2e-10
tr|A9PE92|A9PE92_POPTR Putative uncharacterized protein OS=Popul...    68   3e-10
tr|Q651Q1|Q651Q1_ORYSJ Putative uncharacterized protein OSJNBa00...    67   7e-10
tr|Q5N7L3|Q5N7L3_ORYSJ cDNA clone:006-208-H01, full insert seque...    67   7e-10
tr|Q0IZV3|Q0IZV3_ORYSJ Os09g0547200 protein OS=Oryza sativa subs...    67   7e-10
tr|B8BE42|B8BE42_ORYSI Putative uncharacterized protein OS=Oryza...    67   7e-10
tr|B8A7P0|B8A7P0_ORYSI Putative uncharacterized protein OS=Oryza...    67   7e-10
tr|B4FY70|B4FY70_MAIZE Putative uncharacterized protein OS=Zea m...    67   7e-10
tr|Q9C6L2|Q9C6L2_ARATH Putative uncharacterized protein F2J7.16 ...    66   9e-10
tr|Q8L995|Q8L995_ARATH Putative uncharacterized protein OS=Arabi...    66   9e-10
tr|A7PEB8|A7PEB8_VITVI Chromosome chr11 scaffold_13, whole genom...    66   9e-10
tr|A5BVM7|A5BVM7_VITVI Putative uncharacterized protein OS=Vitis...    66   9e-10

>tr|A9RUY0|A9RUY0_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_119725 PE=4 SV=1
          Length = 195

 Score = 84.7 bits (208), Expect = 2e-15
 Identities = 43/109 (39%), Positives = 60/109 (55%)
 Frame = -2

Query: 512 APRCSDLPELTEAKDMLTIKYGKEFTVAANEIKPDCGVSREVCHAFTVR*TRIQNYKFVS 333
           +PRCSDLPEL + + +   KYGKEF  AA E++PDCGV+R                    
Sbjct: 96  SPRCSDLPELLQIRQLFAAKYGKEFAAAAAELRPDCGVNR-------------------- 135

Query: 332 CTVHKQIIELMSMQPPSGKIKLKLMKDICLQHKIEWRSEWVPEVTLSTP 186
                +IIE +S++ PSG++KLKLMK+I  +H ++W      E  L  P
Sbjct: 136 -----RIIEKLSVRAPSGELKLKLMKEIAAEHDVDWDPTATEEELLKAP 179


>tr|A9SHB4|A9SHB4_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_130020 PE=4 SV=1
          Length = 215

 Score = 82.4 bits (202), Expect = 1e-14
 Identities = 40/98 (40%), Positives = 57/98 (58%)
 Frame = -2

Query: 512 APRCSDLPELTEAKDMLTIKYGKEFTVAANEIKPDCGVSREVCHAFTVR*TRIQNYKFVS 333
           +PRCSDLPEL + + +   KYGKEF  AA E++PDCGV+R                    
Sbjct: 96  SPRCSDLPELLQIRQLFAAKYGKEFAAAAAELRPDCGVNR-------------------- 135

Query: 332 CTVHKQIIELMSMQPPSGKIKLKLMKDICLQHKIEWRS 219
                +IIE +S++ PSG++KLKL+K+I  +H + W S
Sbjct: 136 -----RIIEKLSVRAPSGEVKLKLLKEIAAEHSVSWDS 168


>tr|B4FSB7|B4FSB7_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 511

 Score = 81.3 bits (199), Expect = 3e-14
 Identities = 41/96 (42%), Positives = 56/96 (58%)
 Frame = -2

Query: 512 APRCSDLPELTEAKDMLTIKYGKEFTVAANEIKPDCGVSREVCHAFTVR*TRIQNYKFVS 333
           APRC+DLPEL + + M   KYGKEF  AA+E+ PDCGV+R                    
Sbjct: 115 APRCADLPELIQVQMMFATKYGKEFVAAASELMPDCGVNR-------------------- 154

Query: 332 CTVHKQIIELMSMQPPSGKIKLKLMKDICLQHKIEW 225
                QIIEL+S++PP    KLKL+K+I  +H+++W
Sbjct: 155 -----QIIELLSIRPPPVHAKLKLLKEIAEEHEVDW 185


>tr|A7L4A9|A7L4A9_CARPA Putative uncharacterized protein OS=Carica
           papaya PE=4 SV=1
          Length = 528

 Score = 80.9 bits (198), Expect = 3e-14
 Identities = 40/96 (41%), Positives = 58/96 (60%)
 Frame = -2

Query: 512 APRCSDLPELTEAKDMLTIKYGKEFTVAANEIKPDCGVSREVCHAFTVR*TRIQNYKFVS 333
           APRC+DLPEL + + +  IKYGKEF  AA E+ PDCGV+R                    
Sbjct: 113 APRCADLPELLQVQMLFAIKYGKEFVSAAAELMPDCGVNR-------------------- 152

Query: 332 CTVHKQIIELMSMQPPSGKIKLKLMKDICLQHKIEW 225
                Q+IEL+S++ PS ++KLKL+K+I  +H+++W
Sbjct: 153 -----QLIELLSIRAPSSELKLKLLKEIAEEHELDW 183


>tr|Q6Z4T7|Q6Z4T7_ORYSJ Os08g0175200 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0054L03.38 PE=4 SV=1
          Length = 561

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 40/96 (41%), Positives = 55/96 (57%)
 Frame = -2

Query: 512 APRCSDLPELTEAKDMLTIKYGKEFTVAANEIKPDCGVSREVCHAFTVR*TRIQNYKFVS 333
           APRC+DLPEL + + M   KYGKEF  AA E+ PDCGV+R                    
Sbjct: 117 APRCADLPELMQVQMMFATKYGKEFVAAATELMPDCGVNR-------------------- 156

Query: 332 CTVHKQIIELMSMQPPSGKIKLKLMKDICLQHKIEW 225
                QIIEL+S++ P   +K+KL+K+I  +H+I+W
Sbjct: 157 -----QIIELLSIRAPPVDVKMKLLKEIAEEHEIDW 187


>tr|B0FZD6|B0FZD6_CARPA Putative uncharacterized protein OS=Carica
           papaya PE=4 SV=1
          Length = 528

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 39/96 (40%), Positives = 57/96 (59%)
 Frame = -2

Query: 512 APRCSDLPELTEAKDMLTIKYGKEFTVAANEIKPDCGVSREVCHAFTVR*TRIQNYKFVS 333
           APRC+DLPEL + + +   KYGKEF  AA E+ PDCGV+R                    
Sbjct: 113 APRCADLPELLQVQMLFATKYGKEFVSAAAELMPDCGVNR-------------------- 152

Query: 332 CTVHKQIIELMSMQPPSGKIKLKLMKDICLQHKIEW 225
                Q+IEL+S++ PS ++KLKL+K+I  +H+++W
Sbjct: 153 -----QLIELLSIRAPSSELKLKLLKEIAEEHELDW 183


>tr|A7L4A4|A7L4A4_CARPA Putative uncharacterized protein OS=Carica
           papaya PE=4 SV=1
          Length = 533

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 39/96 (40%), Positives = 57/96 (59%)
 Frame = -2

Query: 512 APRCSDLPELTEAKDMLTIKYGKEFTVAANEIKPDCGVSREVCHAFTVR*TRIQNYKFVS 333
           APRC+DLPEL + + +   KYGKEF  AA E+ PDCGV+R                    
Sbjct: 113 APRCADLPELLQVQMLFATKYGKEFVSAAAELMPDCGVNR-------------------- 152

Query: 332 CTVHKQIIELMSMQPPSGKIKLKLMKDICLQHKIEW 225
                Q+IEL+S++ PS ++KLKL+K+I  +H+++W
Sbjct: 153 -----QLIELLSIRAPSSELKLKLLKEIAEEHELDW 183


>tr|A3BQ54|A3BQ54_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_025176 PE=4 SV=1
          Length = 1569

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 40/96 (41%), Positives = 55/96 (57%)
 Frame = -2

Query: 512  APRCSDLPELTEAKDMLTIKYGKEFTVAANEIKPDCGVSREVCHAFTVR*TRIQNYKFVS 333
            APRC+DLPEL + + M   KYGKEF  AA E+ PDCGV+R                    
Sbjct: 1125 APRCADLPELMQVQMMFATKYGKEFVAAATELMPDCGVNR-------------------- 1164

Query: 332  CTVHKQIIELMSMQPPSGKIKLKLMKDICLQHKIEW 225
                 QIIEL+S++ P   +K+KL+K+I  +H+I+W
Sbjct: 1165 -----QIIELLSIRAPPVDVKMKLLKEIAEEHEIDW 1195


>tr|A2YRR3|A2YRR3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_28007 PE=4 SV=1
          Length = 561

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 40/96 (41%), Positives = 55/96 (57%)
 Frame = -2

Query: 512 APRCSDLPELTEAKDMLTIKYGKEFTVAANEIKPDCGVSREVCHAFTVR*TRIQNYKFVS 333
           APRC+DLPEL + + M   KYGKEF  AA E+ PDCGV+R                    
Sbjct: 117 APRCADLPELMQVQMMFATKYGKEFVAAATELMPDCGVNR-------------------- 156

Query: 332 CTVHKQIIELMSMQPPSGKIKLKLMKDICLQHKIEW 225
                QIIEL+S++ P   +K+KL+K+I  +H+I+W
Sbjct: 157 -----QIIELLSIRAPPVDVKMKLLKEIAEEHEIDW 187


>tr|A7QLT5|A7QLT5_VITVI Chromosome chr18 scaffold_121, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00001776001
           PE=4 SV=1
          Length = 539

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 39/96 (40%), Positives = 55/96 (57%)
 Frame = -2

Query: 512 APRCSDLPELTEAKDMLTIKYGKEFTVAANEIKPDCGVSREVCHAFTVR*TRIQNYKFVS 333
           APRC+DLPEL + + ++  KYGKEF  AA E+ PDCGV R                    
Sbjct: 113 APRCADLPELLQVQMLMASKYGKEFVAAATELMPDCGVCR-------------------- 152

Query: 332 CTVHKQIIELMSMQPPSGKIKLKLMKDICLQHKIEW 225
                Q+IEL+S++ PS  +KLKL+K+I  +H ++W
Sbjct: 153 -----QLIELLSVRAPSPDVKLKLLKEIAEEHGLDW 183