BP914398
Clone id YMU001_000058_D12
Library
Length 490
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000058_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GAATGCAGGAAGTAGTTGAAACCTCCTTGGATGATGCTATGTAGACGTCTATGTTTGATG
CAGTGCTTGATCATACTTTGATGGAGACGGTACCTTCATAATTTATGAGTTCTTGATCAG
GATTTGACGAAGACACATAGCTTCTTAGTTTACGAGTTCTTCCACTGTACGATGGACGGC
AAGATTGATGATGCATTGGGGAGTTTGGTATGGTTAGAGTCTACCACACCTTGATACCTT
GGTACCTTCCTATAGTCTTTACCATGGATGATGAGTGGTCCCTTCCACTACAGTATGATT
GGGGCTTTGCAGGACTTCATAATACTACACAAAGATCGTATGTGAGGGATGCTGATAATT
CTTCAGTTGCAGGACAGGGATTTTGGGACCCATGAACTATATGAGATGCTATGGGATTGT
GTTTCATGTATGCTGAAGTCACTGTGGACTGACATTCGCTGCATCGTTGAGATGTGAATA
GAGCATCTGA
■■Homology search results ■■ -
sp_hit_id Q9XSI2
Definition sp|Q9XSI2|FKBP5_SAGOE FK506-binding protein 5 OS=Saguinus oedipus
Align length 75
Score (bit) 31.2
E-value 2.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914398|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_D12.
(490 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9XSI2|FKBP5_SAGOE FK506-binding protein 5 OS=Saguinus oedipu... 31 2.7
sp|Q25490|APLP_MANSE Apolipophorins OS=Manduca sexta PE=2 SV=1 31 2.7
sp|Q9XSH5|FKBP5_SAIBB FK506-binding protein 5 OS=Saimiri bolivie... 30 4.5
sp|Q4ZG55|GREB1_HUMAN Protein GREB1 OS=Homo sapiens GN=GREB1 PE=... 30 5.8
sp|Q9ERB4|CSPG2_RAT Versican core protein (Fragments) OS=Rattus ... 30 5.9

>sp|Q9XSI2|FKBP5_SAGOE FK506-binding protein 5 OS=Saguinus oedipus
GN=FKBP5 PE=2 SV=2
Length = 457

Score = 31.2 bits (69), Expect = 2.7
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = -1

Query: 301 QSYCSGRDHSSSMVKTIGRYQGIKVW--*TLTIPNSPMHHQSCRPSYS-GRTRKLRSYVS 131
+ + S D + V +IG+ Q IK W T+ + H C+P Y+ G T L S
Sbjct: 65 KKFDSSHDRNEPFVFSIGKGQVIKAWDIGVSTMKKGEICHLLCKPEYAYGATGSLPKIPS 124

Query: 130 SSNP--DQELINYEG 92
++ + EL+N++G
Sbjct: 125 NATLFFEVELLNFKG 139


>sp|Q25490|APLP_MANSE Apolipophorins OS=Manduca sexta PE=2 SV=1
Length = 3305

Score = 31.2 bits (69), Expect = 2.7
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -1

Query: 217 LTIPNSPMHHQSCRP-SYSGRTRKLRSYVSSSNPDQELINYEGTVSIKV 74
+TI ++P SY G+ VS+SN DQE+I+YEG ++ K+
Sbjct: 1570 MTISDAPKRGSGASTISYKGK-------VSNSNLDQEIIDYEGQINFKL 1611


>sp|Q9XSH5|FKBP5_SAIBB FK506-binding protein 5 OS=Saimiri
boliviensis boliviensis GN=FKBP5 PE=1 SV=1
Length = 457

Score = 30.4 bits (67), Expect = 4.5
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = -1

Query: 310 AKPQSYCSGRDHSSSMVKTIGRYQGIKVW--*TLTIPNSPMHHQSCRPSYS-GRTRKLRS 140
A + + S D + V +IG+ Q IK W T+ + H C+P Y+ G T L
Sbjct: 62 ANGKKFDSSHDRNEPFVFSIGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGATGSLPK 121

Query: 139 YVSSSNP--DQELINYEG 92
S++ + EL++++G
Sbjct: 122 IPSNATLFFEVELLDFKG 139


>sp|Q4ZG55|GREB1_HUMAN Protein GREB1 OS=Homo sapiens GN=GREB1 PE=2
SV=1
Length = 1949

Score = 30.0 bits (66), Expect = 5.8
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -3

Query: 335 SLCSIMKSCKAPIIL*WKGPLIIHGKDYRKVPRYQGVVDSNHTKLPNASSILPS-IVQWK 159
S CS+ K+C+ P P++ K Y VV ++ + LP A+S+LPS V W
Sbjct: 1245 SQCSLTKACRQP-------PIVFLPKLV-----YDMVVSTDSSGLPKAASLLPSPSVMWA 1292

Query: 158 NS 153
+S
Sbjct: 1293 SS 1294


>sp|Q9ERB4|CSPG2_RAT Versican core protein (Fragments) OS=Rattus
norvegicus GN=Vcan PE=2 SV=2
Length = 2738

Score = 30.0 bits (66), Expect = 5.9
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 7/46 (15%)
Frame = -1

Query: 226 W*TLTIPNSPMHHQSCRP-------SYSGRTRKLRSYVSSSNPDQE 110
W T P +P H S P S+ G+T K +++ SNP+ E
Sbjct: 841 WKPETYPETPEHFSSGEPDVFPTLPSHDGKTTKWSEFITESNPNTE 886


tr_hit_id B7Q7Z6
Definition tr|B7Q7Z6|B7Q7Z6_IXOSC Metalloendopeptidase OMA1, putative OS=Ixodes scapularis
Align length 74
Score (bit) 35.4
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914398|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_D12.
(490 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7Q7Z6|B7Q7Z6_IXOSC Metalloendopeptidase OMA1, putative OS=Ix... 35 1.4
tr|A2Q9G9|A2Q9G9_ASPNC Contig An01c0280, complete genome. OS=Asp... 34 4.2
tr|Q1M362|Q1M362_RHIL3 Putative ATP-binding component of ABC tra... 33 7.1
tr|A2AWV7|A2AWV7_9POTV Polyprotein OS=Narcissus degeneration vir... 33 9.3
tr|B0UIS2|B0UIS2_METS4 Methyl-accepting chemotaxis sensory trans... 33 9.3
tr|A8UP46|A8UP46_9FLAO 50S ribosomal protein L31 type B OS=Flavo... 33 9.3

>tr|B7Q7Z6|B7Q7Z6_IXOSC Metalloendopeptidase OMA1, putative
OS=Ixodes scapularis GN=IscW_ISCW010389 PE=4 SV=1
Length = 345

Score = 35.4 bits (80), Expect = 1.4
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Frame = +1

Query: 145 LVYEFFHCTMDGKID--------DALGSLVWLESTTP*YLGTFL*SLPWMMSGPFHYSMI 300
L +E HC ++ ++ D L SLVWL + T +PW+++ FHY++
Sbjct: 183 LAHEMAHCLLEHTLEKESLAFVLDKLTSLVWLSALTLVKGDVQAVLVPWLVTRVFHYTVF 242

Query: 301 GALQDFIILHKDRM 342
F+ L DR+
Sbjct: 243 LPQSRFMELESDRL 256


>tr|A2Q9G9|A2Q9G9_ASPNC Contig An01c0280, complete genome.
OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
GN=An01g07830 PE=4 SV=1
Length = 502

Score = 33.9 bits (76), Expect = 4.2
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1

Query: 445 TVTSAYMKHNPIASHIVHGSQNPCPAT-EELSASLTYDLCVVL*SPAKPQSYCSGRDHSS 269
T+ Y HNP AS ++HG++ P + E S SL Y +P Y S D+S
Sbjct: 36 TLQQTYSHHNPYASSMLHGNRAPGEISYEHRSHSLDY-------TPPSSSEYVSSGDYSR 88

Query: 268 SM 263
S+
Sbjct: 89 SL 90


>tr|Q1M362|Q1M362_RHIL3 Putative ATP-binding component of ABC
transporter OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=pRL120755 PE=3 SV=1
Length = 313

Score = 33.1 bits (74), Expect = 7.1
Identities = 22/56 (39%), Positives = 27/56 (48%)
Frame = -2

Query: 237 VSRCGRL*PYQTPQCIINLAVHRTVEELVN*EAMCLRQILIKNS*IMKVPSPSKYD 70
+ R GRL Y TPQ I+ V+ VE + + R LI S IM P PS D
Sbjct: 210 IMRDGRLLQYDTPQEILARPVNEFVESFLGPDRAIKRLSLIVVSMIMTAPEPSNGD 265


>tr|A2AWV7|A2AWV7_9POTV Polyprotein OS=Narcissus degeneration virus
PE=3 SV=1
Length = 3184

Score = 32.7 bits (73), Expect = 9.3
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = -1

Query: 166 SGRTRKLRSYVSSSNPDQELINYEGTVSIKV*SSTASNIDVYIASSKEVSTTSCI 2
S ++++ Y+ S + +N +GT S S +SNI VY+AS EV S +
Sbjct: 1502 SSSQKQIKLYIESKLSFDDFVNAQGTSSNACMISKSSNILVYVASYNEVDQLSTL 1556


>tr|B0UIS2|B0UIS2_METS4 Methyl-accepting chemotaxis sensory
transducer OS=Methylobacterium sp. (strain 4-46)
GN=M446_4355 PE=4 SV=1
Length = 425

Score = 32.7 bits (73), Expect = 9.3
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -1

Query: 283 RDHSSSMVKTIGRYQGIKVW*TLTIPNSPMHHQSCRPSYSGRTRKLRSYVS 131
R + ++ +GRY G+ +W + PMH +S R ++S + R+L Y S
Sbjct: 5 RSANDELIAILGRYAGVGLWDAVLHEGDPMHPKS-RWTWSEQFRRLLGYAS 54


>tr|A8UP46|A8UP46_9FLAO 50S ribosomal protein L31 type B
OS=Flavobacteriales bacterium ALC-1 GN=rpmE2 PE=4 SV=1
Length = 582

Score = 32.7 bits (73), Expect = 9.3
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Frame = -1

Query: 313 PAKPQSYCSGRDHSSS--------MVKTIGRYQ-----GIKVW*TLTIPNSPMHHQSCRP 173
PA+ Q+Y SG D + + VKTI ++ G + P + + R
Sbjct: 23 PAELQAYYSGVDFTKTGTDLYDDLAVKTIAKHTLFLTYGERHQFLYDADEDPFNASNVRL 82

Query: 172 SYSGRTRKLRSYVSSSNPDQ-ELINYEGTVSIKV*SSTASNIDVYIASSKEVSTTS 8
YSG +R Y+S SNP+ + N E + + + D+++ + ++S S
Sbjct: 83 IYSGESRSKTEYLSGSNPNSPQTFNTEHVYPRSLLGNGTAEADLHLLRTCDISVNS 138