BP914404
Clone id YMU001_000058_E07
Library
Length 331
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000058_E07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ACTGTGCATCAATCTTGAAAAGTGCAATTTTGATGTCCAATAGTTTATTTCATGCAACCT
AGCAGCTAATCTTTGAATCTTCCTGTCTTCCGCAAGGACTGCTAGCCCATTGAATGTTAA
GGTTGATGAATCATGTAATGCATCCTCGGAGTCTCCTTCCTCAAGGACAGACAGATCGCC
TCTTCGTACACCAAGAATCCTTTCTTTAACCTCTCTTGAGAAAGGGGCCTTCCGTTGTTT
AACTACTCCAATCCCTTTCATCCAAATCTCACGTCTCTTTGGCACTTCTTGAATCTCATC
ATCTACAAACTTGTCTATTTCTGCTGTCGGC
■■Homology search results ■■ -
sp_hit_id O45379
Definition sp|O45379|ARL3_CAEEL ADP-ribosylation factor-like protein 3 OS=Caenorhabditis elegans
Align length 55
Score (bit) 33.5
E-value 0.34
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914404|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_E07.
(331 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O45379|ARL3_CAEEL ADP-ribosylation factor-like protein 3 OS=C... 33 0.34
sp|Q9SA76|PPR64_ARATH Pentatricopeptide repeat-containing protei... 30 2.9
sp|P43892|KCY1_HAEIN Cytidylate kinase 1 OS=Haemophilus influenz... 30 3.8
sp|Q0BGD7|RGMG1_BURCM Putative ribose/galactose/methyl galactosi... 29 8.4
sp|P37278|ATCL_SYNE7 Probable calcium-transporting ATPase OS=Syn... 29 8.4

>sp|O45379|ARL3_CAEEL ADP-ribosylation factor-like protein 3
OS=Caenorhabditis elegans GN=arl-3 PE=1 SV=1
Length = 184

Score = 33.5 bits (75), Expect = 0.34
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = -2

Query: 252 IGVVKQRKAPFSREVKERILGV-RRGDLSVLEEGDSEDALHDSSTLTFNGLAVLA 91
I V+K K+P RE++ +LG+ G ++L++ SED H + T FN V A
Sbjct: 4 IDVLKSFKSPSGREIRILLLGLDNAGKTTILKQLSSEDVQHVTPTKGFNVKTVAA 58


>sp|Q9SA76|PPR64_ARATH Pentatricopeptide repeat-containing protein
At1g30610, chloroplastic OS=Arabidopsis thaliana
GN=EMB2279 PE=2 SV=1
Length = 1006

Score = 30.4 bits (67), Expect = 2.9
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = -2

Query: 111 NGLAVLAEDRKIQRLAARLHEINYWTSKLHFSR 13
+GL +LAE+R+I+RLA HEI +SKL +R
Sbjct: 361 DGLDLLAEERRIERLANERHEIR--SSKLSGTR 391


>sp|P43892|KCY1_HAEIN Cytidylate kinase 1 OS=Haemophilus influenzae
GN=cmk1 PE=3 SV=1
Length = 231

Score = 30.0 bits (66), Expect = 3.8
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = -2

Query: 330 PTAEIDKFVDDEIQEVPKRREIWMKGIGVVKQRKAPFSREVKERILGVRRGDLSVLEEGD 151
P A++ F+D +E KRR ++ G + A E+KER R +++ L+ D
Sbjct: 134 PNAQVKLFLDASAEERAKRRYKQLQNKG-INGNFAQILAEIKERDFRDRNREVAPLKPAD 192

Query: 150 SEDALHDSSTLTFN 109
+ L DS+TL+ +
Sbjct: 193 -DALLLDSTTLSID 205


>sp|Q0BGD7|RGMG1_BURCM Putative ribose/galactose/methyl galactoside
import ATP-binding protein 1 OS=Burkholderia ambifaria
(strain ATCC BAA-244 / AMMD) GN=Bamb_1228 PE=3 SV=1
Length = 517

Score = 28.9 bits (63), Expect = 8.4
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -2

Query: 213 EVKERILGVRRGDLSVLEEGDSEDALHDSSTLTFNGLAVLAEDRKIQRLA 64
EV I G R D + GD+ ++ +G+A L+EDRK LA
Sbjct: 312 EVARAIFGAERPDAGSILLGDTPVEINSPREAIRHGIAYLSEDRKKDGLA 361


>sp|P37278|ATCL_SYNE7 Probable calcium-transporting ATPase
OS=Synechococcus elongatus (strain PCC 7942) GN=pacL
PE=3 SV=2
Length = 926

Score = 28.9 bits (63), Expect = 8.4
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = -2

Query: 261 MKGIGVVKQRKAPFSREVKERILGVRRGDLSVLEEGDSEDA---LHDSSTLTFNGLAVLA 91
+KG+ R +R+ + + G+ GDL +LE GD A L +S+ L A+
Sbjct: 129 LKGMAAPLVRVRRDNRDQEIPVAGLVPGDLILLEAGDQVPADARLVESANLQVKESALTG 188

Query: 90 EDRKIQRLA 64
E +Q+LA
Sbjct: 189 EAEAVQKLA 197


tr_hit_id B3MAN7
Definition tr|B3MAN7|B3MAN7_DROAN GF20137 OS=Drosophila ananassae
Align length 43
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914404|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_E07.
(331 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3MAN7|B3MAN7_DROAN GF20137 OS=Drosophila ananassae GN=GF2013... 34 3.2
tr|A9SN69|A9SN69_PHYPA Predicted protein OS=Physcomitrella paten... 34 4.2
tr|A3GGN1|A3GGN1_PICST Predicted protein OS=Pichia stipitis GN=P... 33 5.5
tr|Q64AU3|Q64AU3_9ARCH Putative uncharacterized protein OS=uncul... 33 5.5
tr|A1SYC9|A1SYC9_PSYIN ABC transporter for sugar (Aldose) ATP-bi... 33 9.4
tr|Q5UZ31|Q5UZ31_HALMA ATP-dependent RNA helicase homolog eIF-4A... 33 9.4

>tr|B3MAN7|B3MAN7_DROAN GF20137 OS=Drosophila ananassae GN=GF20137
PE=4 SV=1
Length = 632

Score = 34.3 bits (77), Expect = 3.2
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = -2

Query: 171 SVLEEGDSEDALHDSSTLTFNGLAVLAEDRKIQRLAARLHEIN 43
++LEE D + +LH S +T NG V+A K +R++ H +N
Sbjct: 271 NILEEYDLKSSLHKSVIVTDNGANVVAAFNKYKRISCACHNLN 313


>tr|A9SN69|A9SN69_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_81652 PE=4 SV=1
Length = 799

Score = 33.9 bits (76), Expect = 4.2
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = -2

Query: 306 VDDEIQEVPKRREIWMKGIGVVKQRKAPFSREVKERILGVRRGDLSVLEE 157
VDDEI K E W + +++ K P RE RI RG VLEE
Sbjct: 422 VDDEIGGSMKTSEFWASAVSTIQEGKLP--REALLRIAATIRGRTGVLEE 469


>tr|A3GGN1|A3GGN1_PICST Predicted protein OS=Pichia stipitis
GN=PICST_52580 PE=4 SV=1
Length = 551

Score = 33.5 bits (75), Expect = 5.5
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Frame = -2

Query: 207 KERILGVRRGDLSVLEEGDSEDALHDSSTLTFNGLAV-----LAEDRKIQRLAARLHEIN 43
+ER +G + GD+ EEGDSE++ + + + NG V L D+ +RL + E+N
Sbjct: 389 EERFVG-KNGDIKEDEEGDSENSNNTITENSANGSPVKDEDELVSDKNKKRLVSVSLELN 447

Query: 42 YWTSKLHFSRL 10
++LH + L
Sbjct: 448 DEAARLHLATL 458


>tr|Q64AU3|Q64AU3_9ARCH Putative uncharacterized protein
OS=uncultured archaeon GZfos28G7 GN=GZ28G7_47 PE=4 SV=1
Length = 431

Score = 33.5 bits (75), Expect = 5.5
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = -2

Query: 294 IQEVPKRREIWMKGIGVVKQRKAPFSREV---KERILGVRRGDLSVLEEGDSEDALHDSS 124
++E+ +RE+ +KG +K ++ FSR +R G+RRGD+ LE+G A +
Sbjct: 288 VEELKGKREVKVKGGKKIKVIRS-FSRNAILDTDRKYGLRRGDVVFLEDGSGGGA-STAE 345

Query: 123 TLTFNGLAVLAEDRKIQRLAA 61
L G+A + +++ AA
Sbjct: 346 LLASKGVAAVIYGKELSHFAA 366


>tr|A1SYC9|A1SYC9_PSYIN ABC transporter for sugar (Aldose)
ATP-binding protein OS=Psychromonas ingrahamii (strain
37) GN=Ping_2787 PE=3 SV=1
Length = 495

Score = 32.7 bits (73), Expect = 9.4
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -2

Query: 213 EVKERILGVRRGDLSVLEEGDSEDALHDSSTLTFNGLAVLAEDRKIQRLAARL 55
EV E I G+R+ D + D ++ S NG+A++ EDRK Q L +
Sbjct: 298 EVAEAIFGIRKIDSGEIYINDQLADINSSEKAVKNGIALVPEDRKEQGLVLEM 350


>tr|Q5UZ31|Q5UZ31_HALMA ATP-dependent RNA helicase homolog eIF-4A
OS=Haloarcula marismortui GN=eif4A PE=4 SV=1
Length = 852

Score = 32.7 bits (73), Expect = 9.4
Identities = 23/99 (23%), Positives = 45/99 (45%)
Frame = -2

Query: 306 VDDEIQEVPKRREIWMKGIGVVKQRKAPFSREVKERILGVRRGDLSVLEEGDSEDALHDS 127
+ D I EV K R +K +GV + A S ++I +G D +++
Sbjct: 231 IRDAINEVIKDRLSQLKELGVTNKSSADISEREIQQI------------QGQLRDLMNND 278

Query: 126 STLTFNGLAVLAEDRKIQRLAARLHEINYWTSKLHFSRL 10
+ + G+++LAE RK++ + + + + +F RL
Sbjct: 279 QSEGYQGMSLLAEIRKLRTAVTYVETQSVESLRRYFERL 317