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NBDC - LSDB Archive
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BP914405
Clone id YMU001_000058_E08
Library
Length 575
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000058_E08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GTGACTTCTGCCTGCGCTCCTTCTCTTTGGTAACTCTTTTTCGCAGTTCTTTATCTTTTG
CAAAATTCGGACCCTCTCCTCCTTGAGCTTCAATGTTTCAGGATGCTTCTTGTCCAGCTC
ACTTTTCTTTTTGGCAATTCTCTTGTCACAAAGCAGAGCTTCCTTTGTAAACACAGATTG
CTCTTTCTTCTTCTCCTTTACTTCATTCTCCAGCTGCTCCTGAGCCAGATTAGCGTCTGC
AAGGCTTGCCTTCTCAGTTTCCAGCTCTGCTTGGATTCTCTCAATGTCCCTCTCAGTATT
GTACATTTGCCAGAGAAAATACTCGGTTTTCAAGGCTTTCAGTTCACCCTGAAGTCGGAG
ATGTTTTTCTGCTTCTTCTTTCTGCTCTTTTTTCTGCTTCCTTTCTGCAGCTACAGATCT
CTTTTTCTGGTAAGCAAATGCCGACTTTTCCTCAGCAAGCGACTTCTGCATTTCCAGTTC
TTCATAATCTTTTTTGCATTCCTCCGAGCCAGAAATTTGCTCGAACAAAGCTGTGATCTC
TTTAGGGTGTTCGGAAGCTATTGACTCGACATCCC
■■Homology search results ■■ -
sp_hit_id Q9CU62
Definition sp|Q9CU62|SMC1A_MOUSE Structural maintenance of chromosomes protein 1A OS=Mus musculus
Align length 180
Score (bit) 105.0
E-value 2.0e-22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914405|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_E08.
         (575 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9CU62|SMC1A_MOUSE Structural maintenance of chromosomes prot...   105   2e-22
sp|Q14683|SMC1A_HUMAN Structural maintenance of chromosomes prot...   105   2e-22
sp|O97593|SMC1A_BOVIN Structural maintenance of chromosomes prot...   105   2e-22
sp|Q9Z1M9|SMC1A_RAT Structural maintenance of chromosomes protei...   104   3e-22
sp|O93308|SMC1A_XENLA Structural maintenance of chromosomes prot...   101   2e-21
sp|Q8NDV3|SMC1B_HUMAN Structural maintenance of chromosomes prot...    87   5e-17
sp|O94383|SMC1_SCHPO Structural maintenance of chromosomes prote...    79   2e-14
sp|Q920F6|SMC1B_MOUSE Structural maintenance of chromosomes prot...    79   2e-14
sp|P32908|SMC1_YEAST Structural maintenance of chromosomes prote...    70   6e-12
sp|O67124|RAD50_AQUAE Probable DNA double-strand break repair ra...    45   3e-04
sp|A3LYI0|NST1_PICST Stress response protein NST1 OS=Pichia stip...    43   0.001
sp|P26044|RADI_PIG Radixin OS=Sus scrofa GN=RDX PE=2 SV=1              42   0.002
sp|P35241|RADI_HUMAN Radixin OS=Homo sapiens GN=RDX PE=1 SV=1          42   0.002
sp|P58301|RAD50_PYRFU DNA double-strand break repair rad50 ATPas...    42   0.002
sp|Q9PU45|RADI_CHICK Radixin OS=Gallus gallus GN=RDX PE=2 SV=1         42   0.002
sp|Q32LP2|RADI_BOVIN Radixin OS=Bos taurus GN=RDX PE=2 SV=1            42   0.002
sp|P43047|Y864_MYCCT Uncharacterized protein MCAP_0864 OS=Mycopl...    42   0.003
sp|Q7TT50|MRCKB_MOUSE Serine/threonine-protein kinase MRCK beta ...    42   0.003
sp|Q5RDH2|CT2NL_PONAB CTTNBP2 N-terminal-like protein OS=Pongo a...    41   0.004
sp|Q9P2B4|CT2NL_HUMAN CTTNBP2 N-terminal-like protein OS=Homo sa...    41   0.004
sp|Q7TT49|MRCKB_RAT Serine/threonine-protein kinase MRCK beta OS...    41   0.005
sp|Q9D180|YA046_MOUSE Uncharacterized protein ENSP00000361571 ho...    40   0.006
sp|P25386|USO1_YEAST Intracellular protein transport protein USO...    40   0.006
sp|A7EMM3|NST1_SCLS1 Stress response protein nst1 OS=Sclerotinia...    40   0.008
sp|Q91VW5|GOGA4_MOUSE Golgin subfamily A member 4 OS=Mus musculu...    40   0.008
sp|P10587|MYH11_CHICK Myosin-11 OS=Gallus gallus GN=MYH11 PE=1 SV=4    39   0.014
sp|Q6BUT3|NST1_DEBHA Stress response protein NST1 OS=Debaryomyce...    39   0.019
sp|Q80ST9|LCA5_MOUSE Lebercilin OS=Mus musculus GN=Lca5 PE=2 SV=1      39   0.019
sp|A1ST45|IF2_PSYIN Translation initiation factor IF-2 OS=Psychr...    39   0.019
sp|Q99LJ0|CT2NL_MOUSE CTTNBP2 N-terminal-like protein OS=Mus mus...    39   0.019

>sp|Q9CU62|SMC1A_MOUSE Structural maintenance of chromosomes protein
           1A OS=Mus musculus GN=Smc1a PE=1 SV=3
          Length = 1233

 Score =  105 bits (261), Expect = 2e-22
 Identities = 57/180 (31%), Positives = 104/180 (57%)
 Frame = -3

Query: 570 VESIASEHPKEITALFEQISGSEECKKDYEELEMQKSLAEEKSAFAYQKKRSVXXXXXXX 391
           VESIA ++PKE TALFE+IS S E  ++Y++ + +   AEE + F Y +K+++       
Sbjct: 140 VESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEEDTQFNYHRKKNIAAERKEA 199

Query: 390 XXXXXXXXKHLRLQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQL 211
                   ++ RL+ E+   + +  L+++Y+ E +IE++  EL ++   +       +++
Sbjct: 200 KQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKV 259

Query: 210 ENEVKEKKKEQSVFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKEL 31
           E+E+KEKKKE     +E    +K I +K SEL++K P+ +K KE     ++K++  +K L
Sbjct: 260 EDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSL 319


>sp|Q14683|SMC1A_HUMAN Structural maintenance of chromosomes protein
           1A OS=Homo sapiens GN=SMC1A PE=1 SV=2
          Length = 1233

 Score =  105 bits (261), Expect = 2e-22
 Identities = 57/180 (31%), Positives = 104/180 (57%)
 Frame = -3

Query: 570 VESIASEHPKEITALFEQISGSEECKKDYEELEMQKSLAEEKSAFAYQKKRSVXXXXXXX 391
           VESIA ++PKE TALFE+IS S E  ++Y++ + +   AEE + F Y +K+++       
Sbjct: 140 VESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEEDTQFNYHRKKNIAAERKEA 199

Query: 390 XXXXXXXXKHLRLQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQL 211
                   ++ RL+ E+   + +  L+++Y+ E +IE++  EL ++   +       +++
Sbjct: 200 KQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKV 259

Query: 210 ENEVKEKKKEQSVFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKEL 31
           E+E+KEKKKE     +E    +K I +K SEL++K P+ +K KE     ++K++  +K L
Sbjct: 260 EDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSL 319


>sp|O97593|SMC1A_BOVIN Structural maintenance of chromosomes protein
           1A OS=Bos taurus GN=SMC1A PE=1 SV=1
          Length = 1233

 Score =  105 bits (261), Expect = 2e-22
 Identities = 57/180 (31%), Positives = 104/180 (57%)
 Frame = -3

Query: 570 VESIASEHPKEITALFEQISGSEECKKDYEELEMQKSLAEEKSAFAYQKKRSVXXXXXXX 391
           VESIA ++PKE TALFE+IS S E  ++Y++ + +   AEE + F Y +K+++       
Sbjct: 140 VESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEEDTQFNYHRKKNIAAERKEA 199

Query: 390 XXXXXXXXKHLRLQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQL 211
                   ++ RL+ E+   + +  L+++Y+ E +IE++  EL ++   +       +++
Sbjct: 200 KQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKV 259

Query: 210 ENEVKEKKKEQSVFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKEL 31
           E+E+KEKKKE     +E    +K I +K SEL++K P+ +K KE     ++K++  +K L
Sbjct: 260 EDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSL 319


>sp|Q9Z1M9|SMC1A_RAT Structural maintenance of chromosomes protein
           1A OS=Rattus norvegicus GN=Smc1a PE=1 SV=1
          Length = 1233

 Score =  104 bits (260), Expect = 3e-22
 Identities = 57/184 (30%), Positives = 105/184 (57%)
 Frame = -3

Query: 570 VESIASEHPKEITALFEQISGSEECKKDYEELEMQKSLAEEKSAFAYQKKRSVXXXXXXX 391
           VESIA ++PKE TALFE+IS S E  ++Y++ + +   AEE + F Y +K+++       
Sbjct: 140 VESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEEDTQFNYHRKKNIAAERKEA 199

Query: 390 XXXXXXXXKHLRLQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQL 211
                   ++  L+ E+   + +  L+++Y+ E +IE++  EL ++   +       +++
Sbjct: 200 KQEKEEADRYQALKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKV 259

Query: 210 ENEVKEKKKEQSVFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKEL 31
           E+E+KEKKKE     +E    +K I +K SEL++K P+ +K KE     ++K++  +K L
Sbjct: 260 EDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSL 319

Query: 30  PKRR 19
             R+
Sbjct: 320 QNRQ 323


>sp|O93308|SMC1A_XENLA Structural maintenance of chromosomes protein
           1A OS=Xenopus laevis GN=smc1a PE=1 SV=1
          Length = 1232

 Score =  101 bits (252), Expect = 2e-21
 Identities = 57/192 (29%), Positives = 107/192 (55%), Gaps = 7/192 (3%)
 Frame = -3

Query: 570 VESIASEHPKEITALFEQISGSEECKKDYEELEMQKSLAEEKSAFAYQKKRSVXXXXXXX 391
           VESIA ++PKE TALFE+IS S E  ++Y++ + +   AEE + F Y +K+++       
Sbjct: 140 VESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEEDTQFNYHRKKNIAAERKEA 199

Query: 390 XXXXXXXXKHLRLQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQL 211
                   ++ RL+ E+   + +  L+++Y+ E +IE++  EL  +   +       +++
Sbjct: 200 KQEKEEAERYQRLKDEVARAQIQLQLFKLYHNESEIEKLNKELSVKNKGIEKDKKHMDKV 259

Query: 210 ENEVKEKKKEQSVFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQK-------I 52
           E E+K+KKKE     +E    +K I +K +EL++K P+ +K KE     ++K       +
Sbjct: 260 EEELKDKKKELGKMMREQQAIEKEIKEKDAELNQKLPQYIKAKENPSHKIKKFRAAKKSL 319

Query: 51  KNCEKELPKRRS 16
           +N +K+  KR++
Sbjct: 320 QNAQKQYKKRKA 331


>sp|Q8NDV3|SMC1B_HUMAN Structural maintenance of chromosomes protein
           1B OS=Homo sapiens GN=SMC1B PE=1 SV=2
          Length = 1235

 Score = 87.4 bits (215), Expect = 5e-17
 Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 7/190 (3%)
 Frame = -3

Query: 570 VESIASEHPKEITALFEQISGSEECKKDYEELEMQKSLAEEKSAFAYQKKRSVXXXXXXX 391
           VESI+ + PKE T  FE+IS S E   +YEE + +   AEE + F + KK+++       
Sbjct: 140 VESISVKKPKERTQFFEEISTSGELIGEYEEKKRKLQKAEEDAQFNFNKKKNIAAERRQA 199

Query: 390 XXXXXXXXKHLRLQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQL 211
                   ++  L  ELK  K +  L+Q+Y+ E+ I  +  +LE     L+    +    
Sbjct: 200 KLEKEEAERYQSLLEELKMNKIQLQLFQLYHNEKKIHLLNTKLEHVNRDLSVKRESLSHH 259

Query: 210 ENEVKEKKKEQSVFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQK-------I 52
           EN VK +KKE  + T++    +K +   ++ L++K P+ +K KE     L+K       I
Sbjct: 260 ENIVKARKKEHGMLTRQLQQTEKELKSVETLLNQKRPQYIKAKENTSHHLKKLDVAKKSI 319

Query: 51  KNCEKELPKR 22
           K+ EK+  K+
Sbjct: 320 KDSEKQCSKQ 329


>sp|O94383|SMC1_SCHPO Structural maintenance of chromosomes protein
           1 OS=Schizosaccharomyces pombe GN=psm1 PE=1 SV=1
          Length = 1233

 Score = 78.6 bits (192), Expect = 2e-14
 Identities = 47/186 (25%), Positives = 95/186 (51%), Gaps = 3/186 (1%)
 Frame = -3

Query: 573 DVESIASEHPKEITALFEQISGSEECKKDYEELEMQKSLAEEKSAFAYQKKRSVXXXXXX 394
           DVE+IAS+ P E++ L EQISGS E K +Y++ + ++  A   SA ++ KKR +      
Sbjct: 149 DVETIASQSPLELSKLVEQISGSLEYKSEYDKSKDEQDKAVNLSAHSFNKKRGINAELRQ 208

Query: 393 XXXXXXXXXKHLRLQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQ 214
                    ++   + +  + +  Y LW++++ E+ I    AE+   KA        +++
Sbjct: 209 YQEQKTEAERYQSQKEKRDSAQLVYLLWKLFHLEKSISSNMAEVTRLKADSIQLIERRDE 268

Query: 213 LENEVKEKKKEQSVFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRI---LQKIKNC 43
              E+++ K+++    +  L  D+++ K++  +  K PE + + E+ +     L+KI+  
Sbjct: 269 NTKEIEKLKEKEGSIRRNLLAFDRKVRKQEKLIASKRPELISIAEKALESKSNLRKIQRK 328

Query: 42  EKELPK 25
             E+ K
Sbjct: 329 AAEIEK 334


>sp|Q920F6|SMC1B_MOUSE Structural maintenance of chromosomes protein
           1B OS=Mus musculus GN=Smc1b PE=1 SV=1
          Length = 1248

 Score = 78.6 bits (192), Expect = 2e-14
 Identities = 53/178 (29%), Positives = 84/178 (47%)
 Frame = -3

Query: 570 VESIASEHPKEITALFEQISGSEECKKDYEELEMQKSLAEEKSAFAYQKKRSVXXXXXXX 391
           VESI+ + PKE T  FE+IS S E   +YE  + +   AEE + F +  K++V       
Sbjct: 140 VESISMKKPKERTQFFEEISTSGEFIGEYEAKKKKLQKAEEDAQFHFNVKKNVAAERKHA 199

Query: 390 XXXXXXXXKHLRLQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQL 211
                    +  L  ELK  K +  L+Q+Y  E  I  +  ELE    +L+         
Sbjct: 200 KIEKEEAEHYQNLLEELKINKIQLMLFQLYYNEEKINVLNTELEQMDGNLSVVKDTLSHH 259

Query: 210 ENEVKEKKKEQSVFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEK 37
           EN  K KKK+  + T++     K +   ++ L++K P+ +K KE     L+K+   +K
Sbjct: 260 ENIFKAKKKDYGMLTRQLQQTAKELKSVEAILNQKRPQYIKAKENTSHHLKKLDLSKK 317


>sp|P32908|SMC1_YEAST Structural maintenance of chromosomes protein
           1 OS=Saccharomyces cerevisiae GN=SMC1 PE=1 SV=1
          Length = 1225

 Score = 70.5 bits (171), Expect = 6e-12
 Identities = 52/188 (27%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
 Frame = -3

Query: 573 DVESIASEHPKEITALFEQISGSEECKKDYEELEMQKSLAEEKSAFAYQKKRSVXXXXXX 394
           DVE IA++ P E++ +FE++SGS + KK+YEEL+ +     + +  + + +R +      
Sbjct: 153 DVEQIAAQSPVELSRMFEEVSGSIQYKKEYEELKEKIEKLSKSATESIKNRRRIHGELKT 212

Query: 393 XXXXXXXXXKHLRLQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLA--Q 220
                    ++ +   +   L+    LWQ+Y+ E+  E +     T+K S  ++ ++  +
Sbjct: 213 YKEGINKNEEYRKQLDKKNELQKFQALWQLYHLEQQKEEL-----TDKLSALNSEISSLK 267

Query: 219 EQLENEVKEKKKEQSVFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCE 40
            ++ NE+K  ++ +S F KE+ +    I+K+KS+LD       K KE+ V  L+ IK  +
Sbjct: 268 GKINNEMKSLQRSKSSFVKESAV----ISKQKSKLD----YIFKDKEKLVSDLRLIKVPQ 319

Query: 39  KELPKRRS 16
           +   KR S
Sbjct: 320 QAAGKRIS 327


>sp|O67124|RAD50_AQUAE Probable DNA double-strand break repair rad50
           ATPase OS=Aquifex aeolicus GN=rad50 PE=3 SV=1
          Length = 978

 Score = 45.1 bits (105), Expect = 3e-04
 Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
 Frame = -3

Query: 570 VESIASEHPKEITALFEQISGSEECKKDYEELEMQKSLAEEKSAFAYQKKRSVXXXXXXX 391
           V  +ASE  K +    E +    E  KDY   +  K + E+      ++ + +       
Sbjct: 169 VRQLASETFKNLEGKREALKKEYELLKDYTPTK--KEVLEKTLKNLEEELKELKETEEKL 226

Query: 390 XXXXXXXXKHLRLQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQ--E 217
                   +   L+ EL  + T+  L ++ N E+++E+++ +LE  +       +A+  E
Sbjct: 227 RQELKKAEEKDSLERELSQVVTK--LKELENLEKEVEKLREKLEFSRKVAPYVPIAKRIE 284

Query: 216 QLENEVKEKKKEQSVFTKEALLCDKRIAKKKSELDKKHPETLKLKEE---------RVRI 64
           +++ ++ E K  ++  TKE  +    ++  + EL++   E  K KEE         R++ 
Sbjct: 285 EIDKKLTELKVRKNKLTKELAVLKDELSFAQEELNRIEAEKEKFKEEKEREKELEHRLKK 344

Query: 63  LQKIKNCEKELPKRRSA 13
           LQ+IK   KEL +  S+
Sbjct: 345 LQEIKEILKELSQLSSS 361
tr_hit_id A9SLI2
Definition tr|A9SLI2|A9SLI2_PHYPA Condensin complex component SMC1 OS=Physcomitrella patens subsp. patens
Align length 195
Score (bit) 205.0
E-value 2.0e-51
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914405|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_E08.
         (575 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SLI2|A9SLI2_PHYPA Condensin complex component SMC1 OS=Physc...   205   2e-51
tr|Q2QLI0|Q2QLI0_ORYSJ RecF/RecN/SMC N terminal domain containin...   191   3e-47
tr|B8BN83|B8BN83_ORYSI Putative uncharacterized protein OS=Oryza...   191   3e-47
tr|A3CJW5|A3CJW5_ORYSJ Putative uncharacterized protein OS=Oryza...   191   3e-47
tr|B4FN08|B4FN08_MAIZE Putative uncharacterized protein OS=Zea m...   190   4e-47
tr|A7Q1S8|A7Q1S8_VITVI Chromosome chr7 scaffold_44, whole genome...   185   2e-45
tr|Q8GU56|Q8GU56_ORYSA SMC1 protein OS=Oryza sativa GN=smc1 PE=2...   182   1e-44
tr|Q6Q1P4|Q6Q1P4_ARATH Structural maintenance of chromosomes 1 p...   167   5e-40
tr|Q0WSY5|Q0WSY5_ARATH Structural maintenance of chromosomes (SM...   165   2e-39
tr|Q9M1T3|Q9M1T3_ARATH Structural maintenance of chromosomes (SM...   160   6e-38
tr|A5H621|A5H621_SOLLC SMC1 (Fragment) OS=Solanum lycopersicum P...   125   1e-27
tr|B4K7D0|B4K7D0_DROMO GI24164 OS=Drosophila mojavensis GN=GI241...   116   1e-24
tr|B4JIH2|B4JIH2_DROGR GH18490 OS=Drosophila grimshawi GN=GH1849...   116   1e-24
tr|B4MBZ5|B4MBZ5_DROVI GJ14197 OS=Drosophila virilis GN=GJ14197 ...   115   2e-24
tr|B0WY22|B0WY22_CULQU Structural maintenance of chromosomes pro...   114   4e-24
tr|Q178Q7|Q178Q7_AEDAE Structural maintenance of chromosomes smc...   114   5e-24
tr|Q9VCD8|Q9VCD8_DROME SMC1 OS=Drosophila melanogaster GN=SMC1 P...   112   1e-23
tr|Q9N6I4|Q9N6I4_DROME SMC1 protein (Cohesin subunit) OS=Drosoph...   112   1e-23
tr|B4HGH3|B4HGH3_DROSE GM26555 OS=Drosophila sechellia GN=GM2655...   112   1e-23
tr|B3P7A0|B3P7A0_DROER GG11251 OS=Drosophila erecta GN=GG11251 P...   112   1e-23
tr|B4PL25|B4PL25_DROYA GE23444 OS=Drosophila yakuba GN=GE23444 P...   112   2e-23
tr|B4QSF7|B4QSF7_DROSI GD21061 OS=Drosophila simulans GN=GD21061...   110   4e-23
tr|Q298K8|Q298K8_DROPS GA19328 OS=Drosophila pseudoobscura pseud...   110   7e-23
tr|B4G429|B4G429_DROPE GL23399 OS=Drosophila persimilis GN=GL233...   110   7e-23
tr|B4NBN8|B4NBN8_DROWI GK11152 OS=Drosophila willistoni GN=GK111...   107   4e-22
tr|B3MST3|B3MST3_DROAN GF23004 OS=Drosophila ananassae GN=GF2300...   107   4e-22
tr|Q8I954|Q8I954_ANOGA SMC1 protein OS=Anopheles gambiae GN=smc1...   105   2e-21
tr|Q7QD42|Q7QD42_ANOGA AGAP002947-PA OS=Anopheles gambiae GN=AGA...   105   2e-21
tr|A2AFQ5|A2AFQ5_MOUSE Structural maintenance of chromosomes 1A ...   105   2e-21
tr|A0JLM6|A0JLM6_MOUSE Smc1a protein (Fragment) OS=Mus musculus ...   105   2e-21

>tr|A9SLI2|A9SLI2_PHYPA Condensin complex component SMC1
           OS=Physcomitrella patens subsp. patens GN=CPC1502 PE=4
           SV=1
          Length = 1247

 Score =  205 bits (521), Expect = 2e-51
 Identities = 110/195 (56%), Positives = 139/195 (71%), Gaps = 6/195 (3%)
 Frame = -3

Query: 573 DVESIASEHPKEITALFEQISGSEECKKDYEELEMQKSLAEEKSAFAYQKKRSVXXXXXX 394
           DVESIAS++PKE+TALFEQISGSEE KKDYEELE+QK+ AEE + F YQK+++V      
Sbjct: 148 DVESIASKNPKELTALFEQISGSEELKKDYEELEVQKARAEETTVFMYQKRKTVAAERKQ 207

Query: 393 XXXXXXXXXKHLRLQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQ 214
                    KHLRLQGELK LKTEY LWQ++N E+D+    A+L+ E+A+L +    QEQ
Sbjct: 208 KKEQKEEAEKHLRLQGELKELKTEYCLWQLFNIEKDVASTLAQLQRERATLQELYHEQEQ 267

Query: 213 LENEVKEKKKEQSVFTKEALLCDKRIAKKKSELDKK------HPETLKLKEERVRILQKI 52
           LE E+K KK +Q+V  KE+LL DK+ +KKK ELDKK       PE LKLKEE  R+ QKI
Sbjct: 268 LEAEIKAKKMDQAVLIKESLLLDKKSSKKKMELDKKVSCFCSAPELLKLKEEITRLSQKI 327

Query: 51  KNCEKELPKRRSAGR 7
           +NCEK+L K++   R
Sbjct: 328 RNCEKDLEKKKEDKR 342


>tr|Q2QLI0|Q2QLI0_ORYSJ RecF/RecN/SMC N terminal domain containing
           protein, expressed OS=Oryza sativa subsp. japonica
           GN=LOC_Os12g44390 PE=4 SV=2
          Length = 573

 Score =  191 bits (484), Expect = 3e-47
 Identities = 97/191 (50%), Positives = 130/191 (68%)
 Frame = -3

Query: 573 DVESIASEHPKEITALFEQISGSEECKKDYEELEMQKSLAEEKSAFAYQKKRSVXXXXXX 394
           DVESIAS++PKE+TAL EQISGS+E +++Y+ELE QK+ AEEKSA  YQ+KR++      
Sbjct: 155 DVESIASKNPKELTALLEQISGSDELRREYDELEDQKNRAEEKSALIYQEKRTIVMERKQ 214

Query: 393 XXXXXXXXXKHLRLQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQ 214
                     HLRLQ +LK  KTE+ LWQ+Y  E+D E+I+AELE ++ SL       + 
Sbjct: 215 KKAQKEEAENHLRLQQDLKLAKTEHLLWQLYTIEKDAEKIEAELEEDRRSLQQVLEENQS 274

Query: 213 LENEVKEKKKEQSVFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKE 34
            + E+  KKKEQS F K+  LC+K IAKKK ELDKK PE L+LKE+  R+  KIK+C KE
Sbjct: 275 SDYELSAKKKEQSGFLKKMTLCEKSIAKKKLELDKKQPELLRLKEQISRLKSKIKSCNKE 334

Query: 33  LPKRRSAGRSH 1
           + K++   + H
Sbjct: 335 IDKKKDDSKKH 345


>tr|B8BN83|B8BN83_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_39293 PE=4 SV=1
          Length = 1246

 Score =  191 bits (484), Expect = 3e-47
 Identities = 97/191 (50%), Positives = 130/191 (68%)
 Frame = -3

Query: 573 DVESIASEHPKEITALFEQISGSEECKKDYEELEMQKSLAEEKSAFAYQKKRSVXXXXXX 394
           DVESIAS++PKE+TAL EQISGS+E +++Y+ELE QK+ AEEKSA  YQ+KR++      
Sbjct: 155 DVESIASKNPKELTALLEQISGSDELRREYDELEDQKNRAEEKSALIYQEKRTIVMERKQ 214

Query: 393 XXXXXXXXXKHLRLQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQ 214
                     HLRLQ +LK  KTE+ LWQ+Y  E+D E+I+AELE ++ SL       + 
Sbjct: 215 KKAQKEEAENHLRLQQDLKLAKTEHLLWQLYTIEKDAEKIEAELEEDRRSLQQVLEENQS 274

Query: 213 LENEVKEKKKEQSVFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKE 34
            + E+  KKKEQS F K+  LC+K IAKKK ELDKK PE L+LKE+  R+  KIK+C KE
Sbjct: 275 SDYELSAKKKEQSGFLKKMTLCEKSIAKKKLELDKKQPELLRLKEQISRLKSKIKSCNKE 334

Query: 33  LPKRRSAGRSH 1
           + K++   + H
Sbjct: 335 IDKKKDDSKKH 345


>tr|A3CJW5|A3CJW5_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_035587 PE=4 SV=1
          Length = 1224

 Score =  191 bits (484), Expect = 3e-47
 Identities = 97/191 (50%), Positives = 130/191 (68%)
 Frame = -3

Query: 573 DVESIASEHPKEITALFEQISGSEECKKDYEELEMQKSLAEEKSAFAYQKKRSVXXXXXX 394
           DVESIAS++PKE+TAL EQISGS+E +++Y+ELE QK+ AEEKSA  YQ+KR++      
Sbjct: 155 DVESIASKNPKELTALLEQISGSDELRREYDELEDQKNRAEEKSALIYQEKRTIVMERKQ 214

Query: 393 XXXXXXXXXKHLRLQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQ 214
                     HLRLQ +LK  KTE+ LWQ+Y  E+D E+I+AELE ++ SL       + 
Sbjct: 215 KKAQKEEAENHLRLQQDLKLAKTEHLLWQLYTIEKDAEKIEAELEEDRRSLQQVLEENQS 274

Query: 213 LENEVKEKKKEQSVFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKE 34
            + E+  KKKEQS F K+  LC+K IAKKK ELDKK PE L+LKE+  R+  KIK+C KE
Sbjct: 275 SDYELSAKKKEQSGFLKKMTLCEKSIAKKKLELDKKQPELLRLKEQISRLKSKIKSCNKE 334

Query: 33  LPKRRSAGRSH 1
           + K++   + H
Sbjct: 335 IDKKKDDSKKH 345


>tr|B4FN08|B4FN08_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 395

 Score =  190 bits (483), Expect = 4e-47
 Identities = 98/191 (51%), Positives = 131/191 (68%)
 Frame = -3

Query: 573 DVESIASEHPKEITALFEQISGSEECKKDYEELEMQKSLAEEKSAFAYQKKRSVXXXXXX 394
           DVESIAS++PKE+TAL EQISGS+E +++Y+ELE QK+ AEEKSA  YQ+KR++      
Sbjct: 160 DVESIASKNPKELTALLEQISGSDELRREYDELEEQKARAEEKSALVYQEKRTIVMERKQ 219

Query: 393 XXXXXXXXXKHLRLQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQ 214
                    KHLRLQ +LK LKTE++LWQ+Y  E+DIE+I+AEL  ++ SL         
Sbjct: 220 KKVQKEEAEKHLRLQQDLKLLKTEHYLWQLYTIEKDIEKIEAELVEDRESLQQVQEENRS 279

Query: 213 LENEVKEKKKEQSVFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKE 34
            + E+  KKKEQS F K+  L +K I KKK ELDKK PE LKLKE+  R+  KIK+C+KE
Sbjct: 280 SDYELTAKKKEQSAFLKKITLSEKSITKKKLELDKKQPELLKLKEQISRLKSKIKSCKKE 339

Query: 33  LPKRRSAGRSH 1
           + K++   + H
Sbjct: 340 IDKKKDDHKKH 350


>tr|A7Q1S8|A7Q1S8_VITVI Chromosome chr7 scaffold_44, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00028583001
           PE=4 SV=1
          Length = 1205

 Score =  185 bits (469), Expect = 2e-45
 Identities = 99/191 (51%), Positives = 125/191 (65%)
 Frame = -3

Query: 573 DVESIASEHPKEITALFEQISGSEECKKDYEELEMQKSLAEEKSAFAYQKKRSVXXXXXX 394
           DVESIAS++PKE+T L EQISGSE+ KKDYE+LE QK+ AEEKSA  YQKKR++      
Sbjct: 148 DVESIASKNPKELTGLLEQISGSEDLKKDYEDLEEQKARAEEKSALVYQKKRTIVMERKQ 207

Query: 393 XXXXXXXXXKHLRLQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQ 214
                    KHLRLQ +LK+LK E+FLW++ N E+DI +I  +LE E  S  D    QE 
Sbjct: 208 KKEQKEEAEKHLRLQEQLKSLKKEHFLWKLLNIEKDIAKINEDLEAENKSREDVIQEQES 267

Query: 213 LENEVKEKKKEQSVFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKE 34
            E E  + KKEQ+ + KE    +K+I+ K ++LDK  PE LKLKEE  RI  KIK+  KE
Sbjct: 268 CEREASKAKKEQAKYLKEITQFEKKISDKNNKLDKNQPELLKLKEEMSRINSKIKSSRKE 327

Query: 33  LPKRRSAGRSH 1
           L K+R   R H
Sbjct: 328 LDKKREERRKH 338


>tr|Q8GU56|Q8GU56_ORYSA SMC1 protein OS=Oryza sativa GN=smc1 PE=2
           SV=1
          Length = 1264

 Score =  182 bits (462), Expect = 1e-44
 Identities = 96/199 (48%), Positives = 130/199 (65%), Gaps = 8/199 (4%)
 Frame = -3

Query: 573 DVESIASEHPKEITALFEQISGSEECKKDYEELEMQKSLAEEKSAFAYQKKRSVXXXXXX 394
           DVESIAS++PKE+TAL EQISGS+E +++Y+ELE QK+ AEEKSA  YQ+KR++      
Sbjct: 155 DVESIASKNPKELTALLEQISGSDELRREYDELEDQKNRAEEKSALIYQEKRTIVMERKQ 214

Query: 393 XXXXXXXXXKHLRLQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQ 214
                     HLRLQ +LK  KTE+ LWQ+Y  E+D E+I+AELE ++ SL       + 
Sbjct: 215 KKAQKEEAENHLRLQQDLKLAKTEHLLWQLYTIEKDAEKIEAELEEDRRSLQQVLEENQS 274

Query: 213 LENEVKEKKKEQSVFTKEALLCDKRIAKKKSELDKK--------HPETLKLKEERVRILQ 58
            + E+  KKKEQS F K+  LC+K IAKKK ELDK+         PE L+LKE+  R+  
Sbjct: 275 SDYELSAKKKEQSGFLKKMTLCEKSIAKKKLELDKRVSLMWAVVQPELLRLKEQISRLKS 334

Query: 57  KIKNCEKELPKRRSAGRSH 1
           KIK+C KE+ K++   + H
Sbjct: 335 KIKSCNKEIDKKKDDSKKH 353


>tr|Q6Q1P4|Q6Q1P4_ARATH Structural maintenance of chromosomes 1
           protein OS=Arabidopsis thaliana GN=SMC1 PE=2 SV=1
          Length = 1218

 Score =  167 bits (422), Expect = 5e-40
 Identities = 90/191 (47%), Positives = 123/191 (64%)
 Frame = -3

Query: 573 DVESIASEHPKEITALFEQISGSEECKKDYEELEMQKSLAEEKSAFAYQKKRSVXXXXXX 394
           DVESIAS++PKE+T L E+ISGSEE KK+YE LE +K+ AEEK+A  YQKK+++      
Sbjct: 149 DVESIASKNPKELTGLLEEISGSEELKKEYEGLEEKKASAEEKAALIYQKKKTIGNEKKL 208

Query: 393 XXXXXXXXXKHLRLQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQ 214
                    KHLRLQ ELKALK E FLWQ+YN E DIE+   ++++EK++  D     E+
Sbjct: 209 KKAQKEEAEKHLRLQEELKALKRERFLWQLYNIENDIEKANEDVDSEKSNRKDVMRELEK 268

Query: 213 LENEVKEKKKEQSVFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKE 34
            E E  ++K EQ+ + KE    +K+IA+K S+L K  PE L+ KEE  RI  KI+   K+
Sbjct: 269 FEREAGKRKVEQAKYLKEIAQREKKIAEKSSKLGKIQPELLRFKEEIARIKAKIETNRKD 328

Query: 33  LPKRRSAGRSH 1
           + KR+     H
Sbjct: 329 VDKRKKEKGKH 339


>tr|Q0WSY5|Q0WSY5_ARATH Structural maintenance of chromosomes
           (SMC)-like protein (Fragment) OS=Arabidopsis thaliana
           GN=At3g54670 PE=2 SV=1
          Length = 332

 Score =  165 bits (417), Expect = 2e-39
 Identities = 89/184 (48%), Positives = 121/184 (65%)
 Frame = -3

Query: 573 DVESIASEHPKEITALFEQISGSEECKKDYEELEMQKSLAEEKSAFAYQKKRSVXXXXXX 394
           DVESIAS++PKE+T L E+ISGSEE KK+YE LE +K+ AEEK+A  YQKK+++      
Sbjct: 149 DVESIASKNPKELTGLLEEISGSEELKKEYEGLEEKKASAEEKAALIYQKKKTIGNEKKL 208

Query: 393 XXXXXXXXXKHLRLQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQ 214
                    KHLRLQ ELKALK E FLWQ+YN E DIE+   ++++EK++  D     E+
Sbjct: 209 KKAQKEEAEKHLRLQEELKALKRERFLWQLYNIENDIEKANEDVDSEKSNRKDVMRELEK 268

Query: 213 LENEVKEKKKEQSVFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKE 34
            E E  ++K EQ+ + KE    +K+IA+K S+L K  PE L+ KEE  RI  KI+   K+
Sbjct: 269 FEREAGKRKVEQAKYLKEIAQREKKIAEKSSKLGKIQPELLRFKEEIARIKAKIETNRKD 328

Query: 33  LPKR 22
           + KR
Sbjct: 329 VDKR 332


>tr|Q9M1T3|Q9M1T3_ARATH Structural maintenance of chromosomes
           (SMC)-like protein OS=Arabidopsis thaliana GN=T5N23_30
           PE=4 SV=1
          Length = 1265

 Score =  160 bits (404), Expect = 6e-38
 Identities = 90/199 (45%), Positives = 123/199 (61%), Gaps = 8/199 (4%)
 Frame = -3

Query: 573 DVESIASEHPKEITALFEQISGSEECKKDYEELEMQKSLAEEKSAFAYQKKRSVXXXXXX 394
           DVESIAS++PKE+T L E+ISGSEE KK+YE LE +K+ AEEK+A  YQKK+++      
Sbjct: 149 DVESIASKNPKELTGLLEEISGSEELKKEYEGLEEKKASAEEKAALIYQKKKTIGNEKKL 208

Query: 393 XXXXXXXXXKHLRLQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQ 214
                    KHLRLQ ELKALK E FLWQ+YN E DIE+   ++++EK++  D     E+
Sbjct: 209 KKAQKEEAEKHLRLQEELKALKRERFLWQLYNIENDIEKANEDVDSEKSNRKDVMRELEK 268

Query: 213 LENEVKEKKKEQSVFTKEALLCDKRIAKKKSELDK--------KHPETLKLKEERVRILQ 58
            E E  ++K EQ+ + KE    +K+IA+K S+L K          PE L+ KEE  RI  
Sbjct: 269 FEREAGKRKVEQAKYLKEIAQREKKIAEKSSKLGKIVSIPWKSVQPELLRFKEEIARIKA 328

Query: 57  KIKNCEKELPKRRSAGRSH 1
           KI+   K++ KR+     H
Sbjct: 329 KIETNRKDVDKRKKEKGKH 347