BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914410|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_F01.
         (608 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q4R7H3|CCD99_MACFA Coiled-coil domain-containing protein 99 O...    33   1.5  
sp|Q96EA4|CCD99_HUMAN Coiled-coil domain-containing protein 99 O...    32   1.9  
sp|P56653|4HBT_PSEUC 4-hydroxybenzoyl-CoA thioesterase OS=Pseudo...    32   3.3  
sp|Q08DR9|CCD99_BOVIN Coiled-coil domain-containing protein 99 O...    31   4.3  
sp|Q7VZQ2|NUOD_BORPE NADH-quinone oxidoreductase subunit D OS=Bo...    31   5.6  
sp|Q90511|EI2BB_FUGRU Translation initiation factor eIF-2B subun...    30   7.4  
sp|Q21YC4|NUOD_RHOFD NADH-quinone oxidoreductase subunit D OS=Rh...    30   9.6  

>sp|Q4R7H3|CCD99_MACFA Coiled-coil domain-containing protein 99
           OS=Macaca fascicularis GN=CCDC99 PE=2 SV=1
          Length = 605

 Score = 32.7 bits (73), Expect = 1.5
 Identities = 21/68 (30%), Positives = 37/68 (54%)
 Frame = +2

Query: 326 KTIDVEVIRLLECHIGLYIYATTEVNSILQFKPGTCKNEMMTIVCEWESTTFAIERTIDV 505
           K  + E  RL     GL +    E  + LQ +   C+NEMMT+   +E   + ++R +++
Sbjct: 12  KLKEAEEERLKAAQYGLQL---VESQNELQNQLDKCRNEMMTMTESYEQEKYTLQREVEL 68

Query: 506 EAIRILES 529
           ++ R+LES
Sbjct: 69  KS-RMLES 75


>sp|Q96EA4|CCD99_HUMAN Coiled-coil domain-containing protein 99
           OS=Homo sapiens GN=CCDC99 PE=1 SV=1
          Length = 605

 Score = 32.3 bits (72), Expect = 1.9
 Identities = 20/65 (30%), Positives = 36/65 (55%)
 Frame = +2

Query: 335 DVEVIRLLECHIGLYIYATTEVNSILQFKPGTCKNEMMTIVCEWESTTFAIERTIDVEAI 514
           + E  RL     GL +    E  + LQ +   C+NEMMT+   +E   + ++R +++++ 
Sbjct: 15  EAEEERLKAAQYGLQL---VESQNELQNQLDKCRNEMMTMTESYEQEKYTLQREVELKS- 70

Query: 515 RILES 529
           R+LES
Sbjct: 71  RMLES 75


>sp|P56653|4HBT_PSEUC 4-hydroxybenzoyl-CoA thioesterase
           OS=Pseudomonas sp. (strain CBS-3) PE=1 SV=1
          Length = 141

 Score = 31.6 bits (70), Expect = 3.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 218 KCRCLPSRHTMVTASLVHTPILNCKVAFSC 129
           KC   P R T+V   +V TPI++C  +F C
Sbjct: 41  KCGLPPWRQTVVERGIVGTPIVSCNASFVC 70


>sp|Q08DR9|CCD99_BOVIN Coiled-coil domain-containing protein 99
           OS=Bos taurus GN=CCDC99 PE=2 SV=1
          Length = 603

 Score = 31.2 bits (69), Expect = 4.3
 Identities = 15/45 (33%), Positives = 29/45 (64%)
 Frame = +2

Query: 395 EVNSILQFKPGTCKNEMMTIVCEWESTTFAIERTIDVEAIRILES 529
           E  + LQ +   C+NEMMT+   +E   + ++R +++++ R+LES
Sbjct: 32  ESQNELQNQLDKCRNEMMTLTESYEQEKYTLQREVELKS-RMLES 75


>sp|Q7VZQ2|NUOD_BORPE NADH-quinone oxidoreductase subunit D
           OS=Bordetella pertussis GN=nuoD PE=3 SV=1
          Length = 418

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
 Frame = +2

Query: 332 IDVEVIRLLECHIGLYIYAT---TEVNSILQFKPGTCKNEMMTIVCEWESTTFAIERTID 502
           +D EVI+  + HIGL   AT    E  + +Q  P   + + ++++C   +   AIE+ + 
Sbjct: 28  LDGEVIQRADPHIGLLHRATEKLAEHKTFIQALPYMDRLDYVSMMCNEHAYVMAIEKLLG 87

Query: 503 VEA 511
           +EA
Sbjct: 88  IEA 90


>sp|Q90511|EI2BB_FUGRU Translation initiation factor eIF-2B subunit
           beta OS=Fugu rubripes GN=eif2b2 PE=3 SV=1
          Length = 355

 Score = 30.4 bits (67), Expect = 7.4
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
 Frame = -1

Query: 272 LSHTKSMISSTPIVLSICKCRCLPSRHTMVTASLVH-TPILNCKVAF--SCRIP----LF 114
           +S    +I  T  VL+    R +   HT+  A+  H TP++ C   F  S + P     F
Sbjct: 230 MSRVNKVIIGTQTVLANGGLRAVNGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDTF 289

Query: 113 NSF*SPHVVVP 81
           + F SPH V+P
Sbjct: 290 HKFVSPHEVLP 300


>sp|Q21YC4|NUOD_RHOFD NADH-quinone oxidoreductase subunit D
           OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC
           BAA-621 / T118) GN=nuoD PE=3 SV=1
          Length = 417

 Score = 30.0 bits (66), Expect = 9.6
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
 Frame = +2

Query: 332 IDVEVIRLLECHIGLYIYAT---TEVNSILQFKPGTCKNEMMTIVCEWESTTFAIERTID 502
           +D EVI+  + HIGL   AT    E  + +Q  P   + + M+++C   +   A+E+ + 
Sbjct: 28  LDGEVIQRADPHIGLLHRATEKLAETKTYIQALPYMDRLDYMSMMCNESAYCLAVEKMLG 87

Query: 503 VE 508
           +E
Sbjct: 88  LE 89

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914410|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_F01.
         (608 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A1ZW79|A1ZW79_9SPHI Putative uncharacterized protein OS=Micro...    34   7.5  
tr|B3M198|B3M198_DROAN GF17830 OS=Drosophila ananassae GN=GF1783...    33   9.8  
tr|A0CPE4|A0CPE4_PARTE Chromosome undetermined scaffold_23, whol...    33   9.8  

>tr|A1ZW79|A1ZW79_9SPHI Putative uncharacterized protein
           OS=Microscilla marina ATCC 23134 GN=M23134_04498 PE=4
           SV=1
          Length = 103

 Score = 33.9 bits (76), Expect = 7.5
 Identities = 18/64 (28%), Positives = 32/64 (50%)
 Frame = +2

Query: 401 NSILQFKPGTCKNEMMTIVCEWESTTFAIERTIDVEAIRILESHTVVHIYPTTEVKYSFL 580
           N I+QF        +M    EWE   +A+   ID EA++  E+  VV I    E+++  +
Sbjct: 15  NKIIQFTDQNGNANLMFTPTEWEDLYYAMGAVIDDEAMKQEETDKVVAIITVKEIEFEEV 74

Query: 581 LNTL 592
           ++ +
Sbjct: 75  MDRM 78


>tr|B3M198|B3M198_DROAN GF17830 OS=Drosophila ananassae GN=GF17830
           PE=4 SV=1
          Length = 217

 Score = 33.5 bits (75), Expect = 9.8
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
 Frame = +1

Query: 109 ELNNGILQLNATLQ--FKMGVCTKEAVTI---VCLDGRQRHLQIDRTIG-----VEEIML 258
           EL  G+   N  +Q  FK  V  +        VC+ G QRH    R+IG     VE++ +
Sbjct: 34  ELQIGLKNYNPQIQKRFKGSVLLQNIARPQLKVCVFGNQRHCDEARSIGVDFLDVEDLKI 93

Query: 259 LVCDKFYSSR 288
           L CDK Y+ R
Sbjct: 94  LGCDKKYAKR 103


>tr|A0CPE4|A0CPE4_PARTE Chromosome undetermined scaffold_23, whole
            genome shotgun sequence OS=Paramecium tetraurelia
            GN=GSPATT00009052001 PE=4 SV=1
          Length = 2387

 Score = 33.5 bits (75), Expect = 9.8
 Identities = 38/159 (23%), Positives = 54/159 (33%), Gaps = 24/159 (15%)
 Frame = +2

Query: 161  GCVLRRQSP*CVWMG---DNDICKSTGRLVSKK----SCFWCVINFTVQDVQK*EMTTFA 319
            GC LR Q+P C+      D+  C +     + K     C   V N    D+ + E     
Sbjct: 1246 GCALRAQTP-CIVASPSTDSSSCSTAALTFNSKLNQFGCTQLVGNVYRYDMYEYECKLLI 1304

Query: 320  IDKTIDVEVIRLLECHIGLYIYAT----------------TEVNSILQFKPGTC-KNEMM 448
              +    E +    C     IY T                T VN   +     C K E  
Sbjct: 1305 ATEMSGCENLNFNACIKSTSIYLTLMCAWINQRCQQINDFTNVNDCTKLNKYACMKVEKN 1364

Query: 449  TIVCEWESTTFAIERTIDVEAIRILESHTVVHIYPTTEV 565
             ++C+W+ T F +  T         ES T   I PTT +
Sbjct: 1365 DLICKWDDTNFCLAST---------ESSTCASISPTTPI 1394