BP914414 |
Clone id |
YMU001_000058_F06 |
Library |
YMU01 |
Length |
537 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000058_F06. |
Accession |
BP914414 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3846Contig1 |
Sequence |
TGGAGTGGTGATGGGAGGGCTCTTTACATGATTGGCGGCTGTTGTGACTTTGTGGAGATT AGCCGCGGTACAGTCAAACATACTTCGCCGAATTCTGGAGAGATATGGGATCCGGCATCG CGAGAATGGACCTTGGTGCCAGAGCTTTGGCCGGGAGAGCTCTTTCAAGACAGACCCAAT GGGAGAGTAGCTGCATTGGGGGGTCGGTTGTATGCGTAGCGGCGAGTGTGGATGACAGAG ATGTTGGCAGAGGAGCTGATGTATTATGAATGTGCTTCCAAGACATGGATGTCCATGGGG TTTGTTCCATTAGACATAGCTGATCGACACCGTTATGAGTCTTCTTGTGTGCATCTGTTA AAGATGGGGGAAGAGCTGTGGGTGATTCATTGGTGGAAGTGGCTGTGCGTGGCTGCGAAG CCGACACTTTTTCAACCATTGTGCTGGTGGACTCTCCCTCATACATTCAAGAGGGGTCTT CCCCTCCATAATGGTGATATGGTGGGTGAGCTGCATGTATGAGAAGTTATACGATGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q86XZ4 |
Definition |
sp|Q86XZ4|SPAS2_HUMAN Spermatogenesis-associated serine-rich protein 2 OS=Homo sapiens |
Align length |
45 |
Score (bit) |
35.8 |
E-value |
0.13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RRU7 |
Definition |
tr|A9RRU7|A9RRU7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
72 |
Score (bit) |
40.8 |
E-value |
0.046 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914414|Adiantum capillus-veneris mRNA, clone: YMU001_000058_F06. (537 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RRU7|A9RRU7_PHYPA Predicted protein OS=Physcomitrella paten... 41 0.046 tr|A7QI74|A7QI74_VITVI Chromosome chr17 scaffold_101, whole geno... 39 0.13 tr|A9SY82|A9SY82_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.39 tr|A9RET8|A9RET8_PHYPA Predicted protein OS=Physcomitrella paten... 37 0.50 tr|Q5U575|Q5U575_XENLA LOC495346 protein OS=Xenopus laevis GN=kl... 37 0.66 tr|A9TF28|A9TF28_PHYPA Predicted protein OS=Physcomitrella paten... 37 0.86 tr|A9S4B0|A9S4B0_PHYPA Predicted protein (Fragment) OS=Physcomit... 37 0.86 tr|B5ME39|B5ME39_HUMAN Putative uncharacterized protein SPATS2 (... 36 1.4 tr|Q6NYM1|Q6NYM1_DANRE Kelch-like 21 (Drosophila) (Klhl21 protei... 35 1.9 tr|A9SV34|A9SV34_PHYPA Predicted protein OS=Physcomitrella paten... 35 1.9 tr|B1H341|B1H341_XENTR LOC100145550 protein (Fragment) OS=Xenopu... 35 2.5 tr|Q0IKU7|Q0IKU7_RAT Myocardium ischemic preconditioning associa... 35 2.5 tr|A8XKP4|A8XKP4_CAEBR CBR-INX-3.1 protein OS=Caenorhabditis bri... 35 2.5 tr|B6KQZ4|B6KQZ4_TOXGO Putative uncharacterized protein OS=Toxop... 35 3.2 tr|Q8ISF7|Q8ISF7_CAEEL 2MDa_1 protein OS=Caenorhabditis elegans ... 35 3.3 tr|Q8ISF6|Q8ISF6_CAEEL 2MDa_2 protein OS=Caenorhabditis elegans ... 35 3.3 tr|Q8ISF4|Q8ISF4_CAEEL 301KDa_1 protein OS=Caenorhabditis elegan... 35 3.3 tr|Q8ISF3|Q8ISF3_CAEEL 301KDa_2 protein OS=Caenorhabditis elegan... 35 3.3 tr|A8X9J3|A8X9J3_CAEBR CBR-TTN-1 protein OS=Caenorhabditis brigg... 35 3.3 tr|A5AXW4|A5AXW4_VITVI Putative uncharacterized protein OS=Vitis... 34 4.3 tr|B4L1T8|B4L1T8_DROMO GI15240 OS=Drosophila mojavensis GN=GI152... 34 4.3 tr|Q06BK5|Q06BK5_MOUSE Kelch family protein Nd1-S2 OS=Mus muscul... 34 5.6 tr|Q0YFC9|Q0YFC9_9DELT Kelch repeat:Kelch (Fragment) OS=Geobacte... 34 5.6 tr|Q9FM30|Q9FM30_ARATH Similarity to unknown protein OS=Arabidop... 34 5.6 tr|A5CB78|A5CB78_VITVI Putative uncharacterized protein OS=Vitis... 34 5.6 tr|B3MZP6|B3MZP6_DROAN GF19087 OS=Drosophila ananassae GN=GF1908... 34 5.6 tr|Q89TJ5|Q89TJ5_BRAJA Bll1942 protein OS=Bradyrhizobium japonic... 33 7.3 tr|B2EPX4|B2EPX4_9BACT Kelch repeat-containing protein OS=bacter... 33 7.3 tr|Q95TT9|Q95TT9_DROME LD24240p OS=Drosophila melanogaster GN=CG... 33 7.3 tr|Q86BQ6|Q86BQ6_DROME CG17754, isoform D OS=Drosophila melanoga... 33 7.3
>tr|A9RRU7|A9RRU7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_118316 PE=4 SV=1 Length = 386
Score = 40.8 bits (94), Expect = 0.046 Identities = 20/72 (27%), Positives = 35/72 (48%) Frame = +1
Query: 94 SGEIWDPASREWTLVPELWPGELFQDRPNGRVAALGGRLYA*RRVWMTEMLAEELMYYEC 273 S E+++P++ WTL+ W E+ RP G A + GRLY + + L Y+ Sbjct: 252 SAEVYNPSANAWTLLEGFWSMEMQTSRPAGPFAVMYGRLYT--------LNGKNLHRYDV 303
Query: 274 ASKTWMSMGFVP 309 + +W + +P Sbjct: 304 TTASWSVVESIP 315
>tr|A7QI74|A7QI74_VITVI Chromosome chr17 scaffold_101, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000121001 PE=4 SV=1 Length = 433
Score = 39.3 bits (90), Expect = 0.13 Identities = 26/98 (26%), Positives = 41/98 (41%) Frame = +1
Query: 16 RALYMIGGCCDFVEISRGTVKHTSPNSGEIWDPASREWTLVPELWPGELFQDRPNGRVAA 195 R Y+IGG G S GE++D R W +P ++PG VA Sbjct: 282 RKFYVIGGI--------GVGNSNSLTCGEVYDLEMRTWREIPNMFPGRNGSAGAPPLVAV 333
Query: 196 LGGRLYA*RRVWMTEMLAEELMYYECASKTWMSMGFVP 309 + LYA + +E+ Y+ A W+++G +P Sbjct: 334 VNNELYA------ADYAEKEVRKYDKARNLWVTVGRLP 365
>tr|A9SY82|A9SY82_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_189687 PE=4 SV=1 Length = 368
Score = 37.7 bits (86), Expect = 0.39 Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 5/103 (4%) Frame = +1
Query: 94 SGEIWDPASREWTLVPELWPGELFQDRPNGR-----VAALGGRLYA*RRVWMTEMLAEEL 258 SGE +D + W +V +WP + +P G+ VA + +LYA + EL Sbjct: 227 SGEYYDESENRWVIVENMWPAA--RTQPPGQTAPPLVAVVKDQLYA------ADASTMEL 278
Query: 259 MYYECASKTWMSMGFVPLDIADRHRYESSCVHLLKMGEELWVI 387 Y + TW +G VP D + + +G+E++VI Sbjct: 279 NAYHKGTNTWRPLGPVPYRSVDASGWG---MGFKAVGDEIFVI 318
>tr|A9RET8|A9RET8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_104453 PE=4 SV=1 Length = 389
Score = 37.4 bits (85), Expect = 0.50 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 4/78 (5%) Frame = +1
Query: 94 SGEIWDPASREWTLVPELWPGELFQDRP----NGRVAALGGRLYA*RRVWMTEMLAEELM 261 S E++D ++ W+ V +WP L P + AL GRLY+ R +E++ Sbjct: 253 SAEVYDSRAKSWSFVDNMWP--LISTEPAVANPSSLVALAGRLYSIR--------GKEVV 302
Query: 262 YYECASKTWMSMGFVPLD 315 Y TW ++ VP D Sbjct: 303 VYSQQQNTWTAVEKVPED 320
>tr|Q5U575|Q5U575_XENLA LOC495346 protein OS=Xenopus laevis GN=klhl21 PE=2 SV=1 Length = 615
Score = 37.0 bits (84), Expect = 0.66 Identities = 22/79 (27%), Positives = 41/79 (51%) Frame = +1
Query: 73 VKHTSPNSGEIWDPASREWTLVPELWPGELFQDRPNGRVAALGGRLYA*RRVWMTEMLAE 252 V+ SP ++++P+ EW +P + Q G +AALGG+LY T L++ Sbjct: 485 VRDDSPEV-DVYNPSKNEWDKIPPM-----IQVHVGGSLAALGGKLYVSGGYDNTFELSD 538
Query: 253 ELMYYECASKTWMSMGFVP 309 + ++ +++W MG +P Sbjct: 539 VVEAFDPETRSWSLMGRLP 557
>tr|A9TF28|A9TF28_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_108027 PE=4 SV=1 Length = 397
Score = 36.6 bits (83), Expect = 0.86 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 2/74 (2%) Frame = +1
Query: 94 SGEIWDPASREWTLVPELWPGELFQD--RPNGRVAALGGRLYA*RRVWMTEMLAEELMYY 267 SGE++DPA WT V +WP +A + G LY +L +E++ Y Sbjct: 261 SGEVFDPARNSWTFVDNMWPFSSPDSDLASPSSLATMAGNLYG--------VLRKEIVVY 312
Query: 268 ECASKTWMSMGFVP 309 W + +P Sbjct: 313 SQERNAWTVVATIP 326
>tr|A9S4B0|A9S4B0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_23835 PE=4 SV=1 Length = 358
Score = 36.6 bits (83), Expect = 0.86 Identities = 29/99 (29%), Positives = 48/99 (48%) Frame = +1
Query: 91 NSGEIWDPASREWTLVPELWPGELFQDRPNGRVAALGGRLYA*RRVWMTEMLAEELMYYE 270 + GEI D + EW ++ +W E + R G+VA L G V+M + + Y+ Sbjct: 229 SDGEIMDLKTGEWRVLKPMW--EEGERRRLGKVAVLSGSKGEPDNVFMLD--GSAIYRYD 284
Query: 271 CASKTWMSMGFVPLDIADRHRYESSCVHLLKMGEELWVI 387 A+ W+ +P + E+SC L+ +G EL+VI Sbjct: 285 VAANRWIREAQLPSTVL----AEASC-RLVPLGGELYVI 318
>tr|B5ME39|B5ME39_HUMAN Putative uncharacterized protein SPATS2 (Fragment) OS=Homo sapiens GN=SPATS2 PE=4 SV=1 Length = 545
Score = 35.8 bits (81), Expect = 1.4 Identities = 19/45 (42%), Positives = 24/45 (53%) Frame = -3
Query: 475 PS*MYEGESTSTMVEKVSASQPRTATSTNESPTALPPSLTDAHKK 341 P Y S + V VS S P A++ + S A PPSLT A+KK Sbjct: 374 PKNSYSTRSRCSSVTSVSLSSPSDASAASSSTCASPPSLTSANKK 418
>tr|Q6NYM1|Q6NYM1_DANRE Kelch-like 21 (Drosophila) (Klhl21 protein) OS=Danio rerio GN=klhl21 PE=2 SV=1 Length = 613
Score = 35.4 bits (80), Expect = 1.9 Identities = 20/70 (28%), Positives = 35/70 (50%) Frame = +1
Query: 100 EIWDPASREWTLVPELWPGELFQDRPNGRVAALGGRLYA*RRVWMTEMLAEELMYYECAS 279 ++++P EW + + Q G V+ALGGRLY T L++ + Y+ +S Sbjct: 485 DVYNPQKNEWDKI-----SPMTQVHVGGSVSALGGRLYVSGGYDNTFELSDVVEVYDPSS 539
Query: 280 KTWMSMGFVP 309 ++W G +P Sbjct: 540 RSWSPAGRLP 549
>tr|A9SV34|A9SV34_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_216023 PE=4 SV=1 Length = 313
Score = 35.4 bits (80), Expect = 1.9 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 5/103 (4%) Frame = +1
Query: 94 SGEIWDPASREWTLVPELWPGELFQDRPNGR-----VAALGGRLYA*RRVWMTEMLAEEL 258 SGE +D + W V +WP + +P G VA + +LYA + EL Sbjct: 172 SGEYYDESEDRWVTVENMWPAA--RTQPPGETAPPLVAVVKDQLYA------ADASTMEL 223
Query: 259 MYYECASKTWMSMGFVPLDIADRHRYESSCVHLLKMGEELWVI 387 Y + TW +G VP D + + +G+E++VI Sbjct: 224 NAYHKGTNTWRPLGPVPYRSVDSSGWG---MGFKAVGDEIFVI 263
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