BP914422
Clone id YMU001_000058_G02
Library
Length 543
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000058_G02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTCAAGGTTGGTTGTTTAAGACCATAGGAAGAGGAAATCAGTTCTACTATGAGTACTCT
CAGTTTTACATCTCACATGTTACATAGAAGTATACTGGTAGGCTTCCTCTCCTAATGAGA
GCGTATAAGGCCAAACATTCATCCCTGATCCAGCGGGTGCCTTTGAGCTTTAGTGATGTA
AAACCTCCAGATCTGACCCAATAGGTACTACTAATGAGCTTGCAAATTGAAGCCCTTGAT
GAGAAGCACAATGAGGTCTCTTATCTGCCTGGTTTGCAACATCAGCTCTATCTTATAATC
GTCCTCTGTCCTGAGCCTTAGACGATGTTGGTTGCTCTTATCCACTTCCACGTAAAATGG
AGGCGTGTAACGAAGCTCCATGCCCAGGAAGGCCTTTGAACCAGGCTTTATTGCTTTGAT
CCGCCTTTTATTGATATCTATTAAGCGCTTTTCAAAGTGCCCTGAGCCTTGACTCAACTT
GGTTGGAGAAGGGTCTCGATTGAGCAAAGCCTCAAACTTGAAGTTTCCTTGTCCCAGCTT
CTT
■■Homology search results ■■ -
sp_hit_id A6Q576
Definition sp|A6Q576|SYA_NITSB Alanyl-tRNA synthetase OS=Nitratiruptor sp. (strain SB155-2)
Align length 70
Score (bit) 33.5
E-value 0.68
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914422|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_G02.
(543 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A6Q576|SYA_NITSB Alanyl-tRNA synthetase OS=Nitratiruptor sp. ... 33 0.68
sp|Q9H324|ATS10_HUMAN A disintegrin and metalloproteinase with t... 30 7.6
sp|Q6GM71|LRWD1_XENLA Leucine-rich repeat and WD repeat-containi... 30 9.9

>sp|A6Q576|SYA_NITSB Alanyl-tRNA synthetase OS=Nitratiruptor sp.
(strain SB155-2) GN=alaS PE=3 SV=1
Length = 850

Score = 33.5 bits (75), Expect = 0.68
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = -1

Query: 444 LIDINKRRIKAIKPGSKAFLGMELRYTPPFYVEVDKSNQHRLRLRTEDDYKIELMLQTRQ 265
L+D + ++ +++KPG K ++ +E PFY E R +R + KI +L T++
Sbjct: 461 LLDESFKKCESLKPGQKGWILLE---ETPFYAESGGQIGDRGEIRLYEGEKIAKVLDTKK 517

Query: 264 IRDLIVLLIK 235
DL + L++
Sbjct: 518 FFDLNMSLVE 527


>sp|Q9H324|ATS10_HUMAN A disintegrin and metalloproteinase with
thrombospondin motifs 10 OS=Homo sapiens GN=ADAMTS10
PE=1 SV=2
Length = 1103

Score = 30.0 bits (66), Expect = 7.6
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3

Query: 315 ALDDVGCSYPLPRKMEACNEAPCP 386
ALDD C P P +EAC+ CP
Sbjct: 922 ALDDSACPQPRPPVLEACHGPTCP 945


>sp|Q6GM71|LRWD1_XENLA Leucine-rich repeat and WD repeat-containing
protein 1 OS=Xenopus laevis GN=lrwd1 PE=2 SV=1
Length = 722

Score = 29.6 bits (65), Expect = 9.9
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1

Query: 88 KYTGRLPLLMRAYKAKHSSLIQRVPLSFSDVKPPDLTQ*VLLMSLQIEALDEKHNEVSYL 267
K T L L K H ++++ LS + DL Q + + ++ LD HN +S L
Sbjct: 3 KLTTELLLKKGLPKCSHLKDLKKLNLSKMQLDLKDLDQKLFSQMVNLDELDISHNTLSDL 62

Query: 268 PG 273
PG
Sbjct: 63 PG 64


tr_hit_id A9RYJ3
Definition tr|A9RYJ3|A9RYJ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 111
Score (bit) 109.0
E-value 8.0e-23
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914422|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_G02.
(543 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9RYJ3|A9RYJ3_PHYPA Predicted protein OS=Physcomitrella paten... 109 8e-23
tr|A9TP35|A9TP35_PHYPA Predicted protein OS=Physcomitrella paten... 102 1e-20
tr|A7Q1D2|A7Q1D2_VITVI Chromosome chr10 scaffold_43, whole genom... 101 2e-20
tr|Q69VA2|Q69VA2_ORYSJ Putative leucine rich repeat protein OS=O... 100 4e-20
tr|Q0D8L5|Q0D8L5_ORYSJ Os07g0148800 protein (Fragment) OS=Oryza ... 100 4e-20
tr|B8B7B1|B8B7B1_ORYSI Putative uncharacterized protein OS=Oryza... 100 4e-20
tr|A3BGK9|A3BGK9_ORYSJ Putative uncharacterized protein OS=Oryza... 100 4e-20
tr|Q0WPR3|Q0WPR3_ARATH Auxin-induced protein (Fragment) OS=Arabi... 97 7e-19
tr|Q00NU6|Q00NU6_ARATH AIR9 protein OS=Arabidopsis thaliana GN=A... 97 7e-19
tr|O82441|O82441_ARATH Putative uncharacterized protein AIR9 (Fr... 97 7e-19
tr|Q676X1|Q676X1_HYAOR LRR (Fragment) OS=Hyacinthus orientalis P... 88 3e-16
tr|O64588|O64588_ARATH Putative uncharacterized protein At2g3468... 88 3e-16

>tr|A9RYJ3|A9RYJ3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_121394 PE=4 SV=1
Length = 1416

Score = 109 bits (273), Expect = 8e-23
Identities = 57/111 (51%), Positives = 83/111 (74%), Gaps = 5/111 (4%)
Frame = -1

Query: 543 KKLGQGNFKFEALLNRDPSPTKLS--QGSGHFEKRLIDINKRRIKAIKPGSKA-FLGMEL 373
+KL G KFEAL +RD SP K QG G E+R++D+NK+R+K +KPGSK F EL
Sbjct: 1292 QKLELGVVKFEALRDRDRSPMKSQNQQGLGSLERRVLDVNKKRVKVVKPGSKTHFASNEL 1351

Query: 372 R--YTPPFYVEVDKSNQHRLRLRTEDDYKIELMLQTRQIRDLIVLLIKGFN 226
R YTPPF+VEV +++QHRL++ + + +++LM+Q+R IRD+IVL+I+GF+
Sbjct: 1352 RGTYTPPFHVEVFRNDQHRLKIVMDSENEVDLMVQSRHIRDVIVLVIRGFS 1402


>tr|A9TP35|A9TP35_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_148415 PE=4 SV=1
Length = 1635

Score = 102 bits (254), Expect = 1e-20
Identities = 53/110 (48%), Positives = 79/110 (71%), Gaps = 5/110 (4%)
Frame = -1

Query: 540 KLGQGNFKFEALLNRDPSPTKLS--QGSGHFEKRLIDINKRRIKAIKPGSKA-FLGMELR 370
KL KFEAL +RD SP K QG G E+R++D+N++R+K +KPGSK F ELR
Sbjct: 1512 KLELAVVKFEALRDRDRSPMKSQNQQGLGSLERRVLDVNRKRVKVVKPGSKTNFASTELR 1571

Query: 369 --YTPPFYVEVDKSNQHRLRLRTEDDYKIELMLQTRQIRDLIVLLIKGFN 226
Y PPF+VEV +++ HR+++ + + ++ELM+Q+R IRD+IVL+I+GF+
Sbjct: 1572 GSYAPPFHVEVFRNDPHRVKIVMDSENEVELMVQSRHIRDIIVLVIRGFS 1621


>tr|A7Q1D2|A7Q1D2_VITVI Chromosome chr10 scaffold_43, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00028406001
PE=4 SV=1
Length = 1717

Score = 101 bits (252), Expect = 2e-20
Identities = 49/107 (45%), Positives = 82/107 (76%), Gaps = 3/107 (2%)
Frame = -1

Query: 543 KKLGQGNFKFEALLNRDPSPTKLSQGSGHFEKRLIDINKRRIKAIKPGSK-AFLGMELR- 370
+KL G+ KFEAL ++D SP K + G G FE+R++++N++R+K +KPGSK +F E+R
Sbjct: 1594 QKLDLGSVKFEALCDKDRSPKK-APGVGSFERRILEVNRKRVKVVKPGSKTSFPTTEIRG 1652

Query: 369 -YTPPFYVEVDKSNQHRLRLRTEDDYKIELMLQTRQIRDLIVLLIKG 232
Y PPF+VE+ +++QHRLR+ + + +++LM+ +R +RD+IVL+I+G
Sbjct: 1653 SYAPPFHVELFRNDQHRLRIVVDSENEVDLMVHSRHLRDVIVLVIRG 1699


>tr|Q69VA2|Q69VA2_ORYSJ Putative leucine rich repeat protein OS=Oryza
sativa subsp. japonica GN=P0022E03.37 PE=4 SV=1
Length = 1689

Score = 100 bits (250), Expect = 4e-20
Identities = 48/107 (44%), Positives = 81/107 (75%), Gaps = 3/107 (2%)
Frame = -1

Query: 543 KKLGQGNFKFEALLNRDPSPTKLSQGSGHFEKRLIDINKRRIKAIKPGSKA-FLGMELR- 370
+KL G+ KFE L ++D +P K +Q GH E+R++++N++RIK +KPGSKA F E+R
Sbjct: 1566 QKLDDGSVKFEVLCDKDRTPKK-AQVMGHLERRILEVNRKRIKVVKPGSKASFPTTEVRG 1624

Query: 369 -YTPPFYVEVDKSNQHRLRLRTEDDYKIELMLQTRQIRDLIVLLIKG 232
Y PPF+VE+ +++QHR ++ + + +++LM+QTR +RD+I+L+I+G
Sbjct: 1625 TYVPPFHVELYRNDQHRFKIVVDGESEVDLMVQTRHMRDVIILVIRG 1671


>tr|Q0D8L5|Q0D8L5_ORYSJ Os07g0148800 protein (Fragment) OS=Oryza
sativa subsp. japonica GN=Os07g0148800 PE=4 SV=1
Length = 376

Score = 100 bits (250), Expect = 4e-20
Identities = 48/107 (44%), Positives = 81/107 (75%), Gaps = 3/107 (2%)
Frame = -1

Query: 543 KKLGQGNFKFEALLNRDPSPTKLSQGSGHFEKRLIDINKRRIKAIKPGSKA-FLGMELR- 370
+KL G+ KFE L ++D +P K +Q GH E+R++++N++RIK +KPGSKA F E+R
Sbjct: 253 QKLDDGSVKFEVLCDKDRTPKK-AQVMGHLERRILEVNRKRIKVVKPGSKASFPTTEVRG 311

Query: 369 -YTPPFYVEVDKSNQHRLRLRTEDDYKIELMLQTRQIRDLIVLLIKG 232
Y PPF+VE+ +++QHR ++ + + +++LM+QTR +RD+I+L+I+G
Sbjct: 312 TYVPPFHVELYRNDQHRFKIVVDGESEVDLMVQTRHMRDVIILVIRG 358


>tr|B8B7B1|B8B7B1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_24899 PE=4 SV=1
Length = 1679

Score = 100 bits (250), Expect = 4e-20
Identities = 48/107 (44%), Positives = 81/107 (75%), Gaps = 3/107 (2%)
Frame = -1

Query: 543 KKLGQGNFKFEALLNRDPSPTKLSQGSGHFEKRLIDINKRRIKAIKPGSKA-FLGMELR- 370
+KL G+ KFE L ++D +P K +Q GH E+R++++N++RIK +KPGSKA F E+R
Sbjct: 1556 QKLDDGSVKFEVLCDKDRTPKK-AQVMGHLERRILEVNRKRIKVVKPGSKASFPTTEVRG 1614

Query: 369 -YTPPFYVEVDKSNQHRLRLRTEDDYKIELMLQTRQIRDLIVLLIKG 232
Y PPF+VE+ +++QHR ++ + + +++LM+QTR +RD+I+L+I+G
Sbjct: 1615 TYVPPFHVELYRNDQHRFKIVVDGESEVDLMVQTRHMRDVIILVIRG 1661


>tr|A3BGK9|A3BGK9_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_022181 PE=4 SV=1
Length = 1813

Score = 100 bits (250), Expect = 4e-20
Identities = 48/107 (44%), Positives = 81/107 (75%), Gaps = 3/107 (2%)
Frame = -1

Query: 543 KKLGQGNFKFEALLNRDPSPTKLSQGSGHFEKRLIDINKRRIKAIKPGSKA-FLGMELR- 370
+KL G+ KFE L ++D +P K +Q GH E+R++++N++RIK +KPGSKA F E+R
Sbjct: 1690 QKLDDGSVKFEVLCDKDRTPKK-AQVMGHLERRILEVNRKRIKVVKPGSKASFPTTEVRG 1748

Query: 369 -YTPPFYVEVDKSNQHRLRLRTEDDYKIELMLQTRQIRDLIVLLIKG 232
Y PPF+VE+ +++QHR ++ + + +++LM+QTR +RD+I+L+I+G
Sbjct: 1749 TYVPPFHVELYRNDQHRFKIVVDGESEVDLMVQTRHMRDVIILVIRG 1795


>tr|Q0WPR3|Q0WPR3_ARATH Auxin-induced protein (Fragment)
OS=Arabidopsis thaliana GN=At2g34680 PE=2 SV=1
Length = 947

Score = 96.7 bits (239), Expect = 7e-19
Identities = 47/108 (43%), Positives = 80/108 (74%), Gaps = 3/108 (2%)
Frame = -1

Query: 543 KKLGQGNFKFEALLNRDPSPTKLSQGSGHFEKRLIDINKRRIKAIKPGSK-AFLGMELR- 370
+KL G KFE L ++DP P K+ G G+ E+R++++N++RIK +KPGSK +F E+R
Sbjct: 824 QKLETGLVKFEVLCDKDPYPKKIV-GEGNLERRMLEMNRKRIKVVKPGSKTSFATTEVRG 882

Query: 369 -YTPPFYVEVDKSNQHRLRLRTEDDYKIELMLQTRQIRDLIVLLIKGF 229
Y PPF+VE +++Q RLR+ + + ++++++Q+R +RD+IVL+I+GF
Sbjct: 883 SYGPPFHVETFRNDQRRLRIVVDSENEVDIVVQSRHLRDVIVLVIRGF 930


>tr|Q00NU6|Q00NU6_ARATH AIR9 protein OS=Arabidopsis thaliana GN=AIR9
PE=2 SV=1
Length = 1708

Score = 96.7 bits (239), Expect = 7e-19
Identities = 47/108 (43%), Positives = 80/108 (74%), Gaps = 3/108 (2%)
Frame = -1

Query: 543 KKLGQGNFKFEALLNRDPSPTKLSQGSGHFEKRLIDINKRRIKAIKPGSK-AFLGMELR- 370
+KL G KFE L ++DP P K+ G G+ E+R++++N++RIK +KPGSK +F E+R
Sbjct: 1585 QKLETGLVKFEVLCDKDPYPKKIV-GEGNLERRMLEMNRKRIKVVKPGSKTSFATTEVRG 1643

Query: 369 -YTPPFYVEVDKSNQHRLRLRTEDDYKIELMLQTRQIRDLIVLLIKGF 229
Y PPF+VE +++Q RLR+ + + ++++++Q+R +RD+IVL+I+GF
Sbjct: 1644 SYGPPFHVETFRNDQRRLRIVVDSENEVDIVVQSRHLRDVIVLVIRGF 1691


>tr|O82441|O82441_ARATH Putative uncharacterized protein AIR9
(Fragment) OS=Arabidopsis thaliana GN=AIR9 PE=2 SV=1
Length = 234

Score = 96.7 bits (239), Expect = 7e-19
Identities = 47/108 (43%), Positives = 80/108 (74%), Gaps = 3/108 (2%)
Frame = -1

Query: 543 KKLGQGNFKFEALLNRDPSPTKLSQGSGHFEKRLIDINKRRIKAIKPGSK-AFLGMELR- 370
+KL G KFE L ++DP P K+ G G+ E+R++++N++RIK +KPGSK +F E+R
Sbjct: 108 QKLETGLVKFEVLCDKDPYPKKIV-GEGNLERRMLEMNRKRIKVVKPGSKTSFATTEVRG 166

Query: 369 -YTPPFYVEVDKSNQHRLRLRTEDDYKIELMLQTRQIRDLIVLLIKGF 229
Y PPF+VE +++Q RLR+ + + ++++++Q+R +RD+IVL+I+GF
Sbjct: 167 SYGPPFHVETFRNDQRRLRIVVDSENEVDIVVQSRHLRDVIVLVIRGF 214