BP914424 |
Clone id |
YMU001_000058_G04 |
Library |
YMU01 |
Length |
592 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000058_G04. |
Accession |
BP914424 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CGTGCCAAAAGGCCAATTCCCGAGAGGCACGGCATGACAACCTCAGTTAAGACAAGGTCC ACTTTAGTGCTTTGATCCATCAAAAGCTCCCATGCCAGTAGCCCATTAGCAGCAGATGTG ACTTCATAGCAACAATTTCGAAGCAGAGCACTAACGACATGCTGGGTTGCATCATCATCC TCCACAAGCAGCACACGAAGCTGCTGCTGTGGAAGGAATCTTTCCCAGCGAATGACAGAG GGCTGCTGCGGTAGAGCTTGCTGCTGATAAAGCTGTGCTTGTCTCACTCCTTGTGAGACT GCCTGTTGAAGAGCCCTGCTCCTGGCCATGGAGGCGTCATCCTTGGTGCCCTCACCCCTC ACTTCCTCAACACTTTGTTTCCATGGCTCTGGTTCGCCATGATCTGTATCAGCTAGAGTG TCACCAGACTCTATGAAATCTGCCTTATGTCCCTGTGTGCCTTCATTACGAGAATCACCA TTTTCTGTTTCTGGATCATCAGATCCTTTAAGAGAACGTGAGCTGCCGTCATCTAAAACA TTCCCATGTCCAGCTTCTACTGATAAACCTCTGACTTGCAAATTCCCATCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q10N34 |
Definition |
sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica |
Align length |
78 |
Score (bit) |
110.0 |
E-value |
4.0e-24 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8A2Q1 |
Definition |
tr|B8A2Q1|B8A2Q1_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
177 |
Score (bit) |
114.0 |
E-value |
5.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914424|Adiantum capillus-veneris mRNA, clone: YMU001_000058_G04. (592 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8A2Q1|B8A2Q1_MAIZE Putative uncharacterized protein OS=Zea m... 114 5e-24 tr|Q2PEF7|Q2PEF7_9ARAE Pseudo-response regulator 37 homologue OS... 110 5e-23 tr|Q10N33|Q10N33_ORYSJ Two-component response regulator-like PRR... 110 5e-23 tr|Q10N32|Q10N32_ORYSJ Two-component response regulator-like PRR... 110 5e-23 tr|Q10N31|Q10N31_ORYSJ Two-component response regulator-like PRR... 110 5e-23 tr|A9SIB9|A9SIB9_PHYPA Circadian clock protein PRR2 OS=Physcomit... 110 5e-23 tr|A3AGR4|A3AGR4_ORYSJ Putative uncharacterized protein OS=Oryza... 110 5e-23 tr|Q2PEF4|Q2PEF4_LEMGI Pseudo-response regulator 37 homologue OS... 109 1e-22 tr|A7NZB2|A7NZB2_VITVI Chromosome chr6 scaffold_3, whole genome ... 109 1e-22 tr|B6SHA1|B6SHA1_MAIZE Two-component response regulator-like PRR... 107 5e-22 tr|A7Q402|A7Q402_VITVI Chromosome chr13 scaffold_48, whole genom... 105 1e-21 tr|A9SIC5|A9SIC5_PHYPA Circadian clock protein PRR4 OS=Physcomit... 103 6e-21 tr|A9U170|A9U170_PHYPA Circadian clock protein PRR1 (Fragment) O... 102 1e-20 tr|B8ALJ0|B8ALJ0_ORYSI Putative uncharacterized protein OS=Oryza... 101 3e-20 tr|Q2PEF3|Q2PEF3_LEMGI Pseudo-response regulator 59 homologue OS... 99 2e-19 tr|Q4PRK6|Q4PRK6_ARATH Pseudo response regulator 3 OS=Arabidopsi... 98 3e-19 tr|Q4PRK5|Q4PRK5_ARATH Pseudo response regulator 3 OS=Arabidopsi... 98 4e-19 tr|Q2PEF6|Q2PEF6_9ARAE Pseudo-response regulator 59 homologue OS... 96 2e-18 tr|Q56XM1|Q56XM1_ARATH Putative uncharacterized protein At2g4679... 94 4e-18 tr|B8B6B7|B8B6B7_ORYSI Putative uncharacterized protein OS=Oryza... 93 1e-17 tr|A7QEV3|A7QEV3_VITVI Chromosome chr16 scaffold_86, whole genom... 93 1e-17 tr|A7PXT9|A7PXT9_VITVI Chromosome chr15 scaffold_37, whole genom... 92 2e-17 tr|A5BJJ5|A5BJJ5_VITVI Putative uncharacterized protein OS=Vitis... 92 2e-17 tr|Q2RAB7|Q2RAB7_ORYSJ CCT motif family protein, expressed OS=Or... 92 3e-17 tr|Q2PEF2|Q2PEF2_LEMGI Pseudo-response regulator 95 homologue OS... 91 6e-17 tr|Q2HTB9|Q2HTB9_MEDTR Response regulator receiver; CCT OS=Medic... 88 4e-16 tr|Q2PEF5|Q2PEF5_9ARAE Pseudo-response regulator 95 homologue OS... 87 5e-16 tr|A7PST4|A7PST4_VITVI Chromosome chr8 scaffold_29, whole genome... 85 3e-15 tr|B4FWH6|B4FWH6_MAIZE Putative uncharacterized protein OS=Zea m... 84 8e-15 tr|Q0J041|Q0J041_ORYSJ Os09g0532400 protein OS=Oryza sativa subs... 82 2e-14
>tr|B8A2Q1|B8A2Q1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 766
Score = 114 bits (284), Expect = 5e-24 Identities = 73/177 (41%), Positives = 89/177 (50%), Gaps = 1/177 (0%) Frame = -3
Query: 530 DGSSRS-LKGSDDPETENGDSRNEGTQGHKADFIESGDTLADTDHGEPEPWKQSVEEVRG 354 DG SR + G + ENG + E ++ E + LA+ H P P Q V+E + Sbjct: 10 DGPSRKDVLGIGNAALENGHHQAEADAD---EWREKEEDLANNGHSAPPPGMQQVDEHKE 66
Query: 353 EGTKDDASMARSRALQQAVSQGVRXXXXXXXXXXXXXPSVIRWERFLPQQQLRVLLVEDD 174 E + I WERFLP + LRVLLVE+D Sbjct: 67 EQRQS-----------------------------------IHWERFLPVKTLRVLLVEND 91
Query: 173 DATQHVVSALLRNCCYEVTSAANGLLAWELLMDQSTKVDLVLTEVVMPCLSGIGLLA 3 D+T+ VVSALLR CCYEV A NGL AW L D +DLVLTEV MPCLSGIGLL+ Sbjct: 92 DSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEVFMPCLSGIGLLS 148
>tr|Q2PEF7|Q2PEF7_9ARAE Pseudo-response regulator 37 homologue OS=Lemna paucicostata GN=LpPRRH37 PE=2 SV=1 Length = 617
Score = 110 bits (276), Expect = 5e-23 Identities = 54/76 (71%), Positives = 65/76 (85%) Frame = -3
Query: 233 IRWERFLPQQQLRVLLVEDDDATQHVVSALLRNCCYEVTSAANGLLAWELLMDQSTKVDL 54 I WERFLP + L+VLLVE+DD+T+HVV+ALLRNC YEVT+ ANGL AW++L + S VD+ Sbjct: 66 IGWERFLPVKSLKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKVLENLSNNVDI 125
Query: 53 VLTEVVMPCLSGIGLL 6 VLTEVVMP LSGIGLL Sbjct: 126 VLTEVVMPSLSGIGLL 141
>tr|Q10N33|Q10N33_ORYSJ Two-component response regulator-like PRR73, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g17570 PE=4 SV=1 Length = 745
Score = 110 bits (276), Expect = 5e-23 Identities = 54/78 (69%), Positives = 63/78 (80%) Frame = -3
Query: 236 VIRWERFLPQQQLRVLLVEDDDATQHVVSALLRNCCYEVTSAANGLLAWELLMDQSTKVD 57 ++RWERFLP + LRVLLVE+DD+T+ VVSALLR CCYEV A NGL AW+ L D +D Sbjct: 69 IVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHID 128
Query: 56 LVLTEVVMPCLSGIGLLA 3 LVLTEVVMP LSGIGLL+ Sbjct: 129 LVLTEVVMPRLSGIGLLS 146
>tr|Q10N32|Q10N32_ORYSJ Two-component response regulator-like PRR73, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g17570 PE=4 SV=1 Length = 533
Score = 110 bits (276), Expect = 5e-23 Identities = 54/78 (69%), Positives = 63/78 (80%) Frame = -3
Query: 236 VIRWERFLPQQQLRVLLVEDDDATQHVVSALLRNCCYEVTSAANGLLAWELLMDQSTKVD 57 ++RWERFLP + LRVLLVE+DD+T+ VVSALLR CCYEV A NGL AW+ L D +D Sbjct: 69 IVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHID 128
Query: 56 LVLTEVVMPCLSGIGLLA 3 LVLTEVVMP LSGIGLL+ Sbjct: 129 LVLTEVVMPRLSGIGLLS 146
>tr|Q10N31|Q10N31_ORYSJ Two-component response regulator-like PRR73, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g17570 PE=4 SV=1 Length = 473
Score = 110 bits (276), Expect = 5e-23 Identities = 54/78 (69%), Positives = 63/78 (80%) Frame = -3
Query: 236 VIRWERFLPQQQLRVLLVEDDDATQHVVSALLRNCCYEVTSAANGLLAWELLMDQSTKVD 57 ++RWERFLP + LRVLLVE+DD+T+ VVSALLR CCYEV A NGL AW+ L D +D Sbjct: 69 IVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHID 128
Query: 56 LVLTEVVMPCLSGIGLLA 3 LVLTEVVMP LSGIGLL+ Sbjct: 129 LVLTEVVMPRLSGIGLLS 146
>tr|A9SIB9|A9SIB9_PHYPA Circadian clock protein PRR2 OS=Physcomitrella patens subsp. patens GN=PpPRR2 PE=4 SV=1 Length = 1143
Score = 110 bits (276), Expect = 5e-23 Identities = 53/75 (70%), Positives = 64/75 (85%) Frame = -3
Query: 227 WERFLPQQQLRVLLVEDDDATQHVVSALLRNCCYEVTSAANGLLAWELLMDQSTKVDLVL 48 WE FL +++LRVLLVEDDDAT+HVV ALLRNC YEVTS ANG LAW LL + ++ DLVL Sbjct: 174 WESFLLKRKLRVLLVEDDDATRHVVGALLRNCNYEVTSVANGSLAWGLLEEANSNFDLVL 233
Query: 47 TEVVMPCLSGIGLLA 3 T+VVMPCLSG+G+L+ Sbjct: 234 TDVVMPCLSGVGILS 248
>tr|A3AGR4|A3AGR4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_009986 PE=4 SV=1 Length = 789
Score = 110 bits (276), Expect = 5e-23 Identities = 54/78 (69%), Positives = 63/78 (80%) Frame = -3
Query: 236 VIRWERFLPQQQLRVLLVEDDDATQHVVSALLRNCCYEVTSAANGLLAWELLMDQSTKVD 57 ++RWERFLP + LRVLLVE+DD+T+ VVSALLR CCYEV A NGL AW+ L D +D Sbjct: 69 IVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHID 128
Query: 56 LVLTEVVMPCLSGIGLLA 3 LVLTEVVMP LSGIGLL+ Sbjct: 129 LVLTEVVMPRLSGIGLLS 146
>tr|Q2PEF4|Q2PEF4_LEMGI Pseudo-response regulator 37 homologue OS=Lemna gibba GN=LgPRRH37 PE=2 SV=1 Length = 623
Score = 109 bits (272), Expect = 1e-22 Identities = 53/76 (69%), Positives = 64/76 (84%) Frame = -3
Query: 233 IRWERFLPQQQLRVLLVEDDDATQHVVSALLRNCCYEVTSAANGLLAWELLMDQSTKVDL 54 I WERFLP + L+VLLVE+DD+T+HVV+ALLRNC YEVT+ ANGL AW+ L + S VD+ Sbjct: 66 IGWERFLPVKSLKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKFLENLSNNVDI 125
Query: 53 VLTEVVMPCLSGIGLL 6 VLTEVVMP L+GIGLL Sbjct: 126 VLTEVVMPSLTGIGLL 141
>tr|A7NZB2|A7NZB2_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024444001 PE=4 SV=1 Length = 719
Score = 109 bits (272), Expect = 1e-22 Identities = 67/176 (38%), Positives = 92/176 (52%) Frame = -3
Query: 533 DDGSSRSLKGSDDPETENGDSRNEGTQGHKADFIESGDTLADTDHGEPEPWKQSVEEVRG 354 D G L ++ + G G G G L ++ E EP + E Sbjct: 9 DGGGEGGLVNRENSTWDEGKEVRNGMVGE-------GQGLGSSE--EDEPGSNEIIEDAN 59
Query: 353 EGTKDDASMARSRALQQAVSQGVRXXXXXXXXXXXXXPSVIRWERFLPQQQLRVLLVEDD 174 +G+++ + Q QG S I W+ FLP + L+VLLVE+D Sbjct: 60 KGSEEAIQVHDGLQNSQQQPQG----------------SAINWDSFLPIRSLKVLLVEND 103
Query: 173 DATQHVVSALLRNCCYEVTSAANGLLAWELLMDQSTKVDLVLTEVVMPCLSGIGLL 6 D+T+HVV+ALLRNC YEVT+ ANGL AW++L D + +D+VLTEVVMP +SGIGLL Sbjct: 104 DSTRHVVTALLRNCSYEVTAVANGLQAWKILEDLTNHIDIVLTEVVMPFISGIGLL 159
>tr|B6SHA1|B6SHA1_MAIZE Two-component response regulator-like PRR73 OS=Zea mays PE=2 SV=1 Length = 765
Score = 107 bits (267), Expect = 5e-22 Identities = 53/77 (68%), Positives = 59/77 (76%) Frame = -3
Query: 233 IRWERFLPQQQLRVLLVEDDDATQHVVSALLRNCCYEVTSAANGLLAWELLMDQSTKVDL 54 I WERFLP + LRVLLVE+DD+T+ VVSALLR CCYEV A NGL AW L D +DL Sbjct: 71 IHWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDL 130
Query: 53 VLTEVVMPCLSGIGLLA 3 VLTEV M CLSGIGLL+ Sbjct: 131 VLTEVFMTCLSGIGLLS 147
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