BP914426
Clone id YMU001_000058_G06
Library
Length 605
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000058_G06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CACGGCTCGGGGCCTGTGCAGATTGACACAGTACAATGATAGATGAGCTATGATACATAT
AATGTATGCACAAAATGAGCCAGAGTGTATGAGCTAAGCTTTACTTACTACAGAAGCATA
TATGGATGGCTAGCTGATTCTGAATTTACAACAACAAAATCCAGTCAAATTGATGCATTC
TTGAATGGCGGATCAGTGCCAACATTTCATCGACAGGCTTATCAACATTAGAATACACGA
CCAGGATGCTCGTCCACCAAAGAAGAGAATGGGTGATTTTGAAGGCGCAGAAAAGAGATC
AGCCCTTACCACGAAACAGACAGGACCCACAAGGGAGAAGGTGCACTAGCCGCATTGGGC
GATTTTCCTAATTGCAGCCGCGATCCCTATCTGTATATACAGTTCCATGATAGTTTTCAA
AAAGAACAGCGCTGAAGACCTTCGGTTCGTAAGCTCAGGAAAGATAACAGCTTAAAACCA
CAGCACTGGTATAGATGCTACAATTTTCGTGGGGCCCGGTAGGGGACTTACTCTTCAGGA
AGAAAATAGTTTGTTCAGGCATAACGCTGGGCAGAGAGGAAATATCCTTAAAAGATCTAT
CAGAC
■■Homology search results ■■ -
sp_hit_id Q8WIT2
Definition sp|Q8WIT2|MATK_STEPS Maturase K OS=Stewartia pseudocamellia
Align length 33
Score (bit) 30.4
E-value 7.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914426|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_G06.
(605 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8WIT2|MATK_STEPS Maturase K OS=Stewartia pseudocamellia GN=m... 30 7.3
sp|Q8WIU9|MATK_GORLA Maturase K OS=Gordonia lasianthus GN=matK P... 30 7.3
sp|Q95ND4|EGF_FELCA Pro-epidermal growth factor OS=Felis silvest... 30 7.3
sp|Q8WIV4|MATK_CYRRA Maturase K OS=Cyrilla racemiflora GN=matK P... 30 9.5

>sp|Q8WIT2|MATK_STEPS Maturase K OS=Stewartia pseudocamellia GN=matK
PE=3 SV=1
Length = 508

Score = 30.4 bits (67), Expect = 7.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2

Query: 362 IFLIAAAIPICIYSSMIVFKKNSAEDLRFVSSG 460
+FL IC Y S+ VF +N + LR +SSG
Sbjct: 210 LFLFLYNFHICEYESIFVFLRNQSSHLRSISSG 242


>sp|Q8WIU9|MATK_GORLA Maturase K OS=Gordonia lasianthus GN=matK PE=3
SV=1
Length = 508

Score = 30.4 bits (67), Expect = 7.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2

Query: 362 IFLIAAAIPICIYSSMIVFKKNSAEDLRFVSSG 460
+FL IC Y S+ VF +N + LR +SSG
Sbjct: 210 LFLFLYNFHICEYESIFVFLRNQSSHLRSISSG 242


>sp|Q95ND4|EGF_FELCA Pro-epidermal growth factor OS=Felis silvestris
catus GN=EGF PE=2 SV=1
Length = 1210

Score = 30.4 bits (67), Expect = 7.3
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -1

Query: 413 LSWNCIYR*GSRLQLGKSPNAASAPSPLWVLSVSW*GLISFLRLQNHPFSSLVDEHPGRV 234
+SW C G LQL K AAS P P + + S I +R + SL+ + G V
Sbjct: 454 VSWECGCFPGYDLQLDKKSCAASGPQPFLLFANS--QDIRHVRFDGTDYGSLLSQQMGMV 511

Query: 233 F 231
F
Sbjct: 512 F 512


>sp|Q8WIV4|MATK_CYRRA Maturase K OS=Cyrilla racemiflora GN=matK PE=3
SV=1
Length = 513

Score = 30.0 bits (66), Expect = 9.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2

Query: 362 IFLIAAAIPICIYSSMIVFKKNSAEDLRFVSSG 460
+FL +C Y S+ VF +N + LR +SSG
Sbjct: 210 LFLFLYNFHVCEYESIFVFLRNQSSHLRSISSG 242


tr_hit_id Q7MB06
Definition tr|Q7MB06|Q7MB06_PHOLL Similar to proton antiporter efflux pump. Putative transmembrane protein OS=Photorhabdus luminescens subsp. laumondii
Align length 102
Score (bit) 36.2
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914426|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_G06.
(605 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7MB06|Q7MB06_PHOLL Similar to proton antiporter efflux pump.... 36 1.5
tr|B6VKF7|B6VKF7_9ENTR Putative transmembrane-transport protein ... 36 1.5
tr|A6D0X5|A6D0X5_9VIBR Putative uncharacterized protein OS=Vibri... 36 2.0

>tr|Q7MB06|Q7MB06_PHOLL Similar to proton antiporter efflux pump.
Putative transmembrane protein OS=Photorhabdus
luminescens subsp. laumondii GN=plu3561 PE=4 SV=1
Length = 510

Score = 36.2 bits (82), Expect = 1.5
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Frame = -3

Query: 492 IPVLWF*AVIFPELTNRRSSALFFLKTIMELYIQIGIAAAIRKIAQCG-------*CTFS 334
+P+L F ++ PE +++ + ++ + +GI AI+ +A G +
Sbjct: 185 VPLLIFGPMLLPESDKKQTGIIDVYSVLLSIVAMVGIVYAIKHLASDGFEISVILELSVG 244

Query: 333 LVGPVCFVVRADLFSAPSKSPILFFGGRASWSCILMLISLSM 208
L+ V FV R P LF G + S I+ L+SL++
Sbjct: 245 LIAGVLFVRRQQRLPVPLMDLSLFRNGMFTGSIIVNLLSLAL 286


>tr|B6VKF7|B6VKF7_9ENTR Putative transmembrane-transport protein
OS=Photorhabdus asymbiotica subsp. asymbiotica ATCC
43949 GN=PA-RVA2-4299 PE=4 SV=1
Length = 510

Score = 36.2 bits (82), Expect = 1.5
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Frame = -3

Query: 492 IPVLWF*AVIFPELTNRRSSALFFLKTIMELYIQIGIAAAIRKIAQCG*CT-------FS 334
+P+L F ++ PE +++ + ++ + +GI AI+ +A G T
Sbjct: 185 VPLLIFGPMLLPESDKKQTGIIDVYSVLLSIIAMVGIVYAIKHLASDGFETSVILELSVG 244

Query: 333 LVGPVCFVVRADLFSAPSKSPILFFGGRASWSCILMLISLSM 208
LV V FV R S P LF G + S ++ L+SL++
Sbjct: 245 LVAGVLFVRRQRSLSVPLMDLSLFRNGVFTGSIMVNLLSLAL 286


>tr|A6D0X5|A6D0X5_9VIBR Putative uncharacterized protein OS=Vibrio
shilonii AK1 GN=VSAK1_25925 PE=4 SV=1
Length = 252

Score = 35.8 bits (81), Expect = 2.0
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -2

Query: 295 LFCAFKITHSLLWWTSILVVYS--NVDKPVDEMLALIRHSRMHQFDW 161
LF +++TH L+ T + YS N+D V+E A +S HQFDW
Sbjct: 125 LFAGYEVTHGLVMLTGVRHTYSKFNIDIGVNEYDAPSINSSGHQFDW 171