BP914431
Clone id YMU001_000058_G11
Library
Length 567
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000058_G11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTTCCACAAAGAGGTGGAAGCGAGGTAAGAAAGATGTCACAGATAGTTTCGACATGTCTG
GGCATGAGAATGTTGCCACTGGTGACGAGACTCATGATAGGCTTCCGTCAGAGCCTGACT
ATAACTCATCACCTGGTAACTTTGCTGGTAGTGGTGATATGAATTATACTGCTGATACAC
CTGAGCTTTTCTACAATCACCATAGCACCTCAAGCTTTCCTGGACAATTACGAGATGATA
GTGTGCTGCCCCTCATTGATATTCCGGCCTCCATTCAGTCCTCTTGTACAAATATGCAGA
GTCACCCGATGGGTTGGGAAATGTACAGATAGAAGTGGGTTTGCATTACAGATCACCACT
CATTCCTAATCTTTGGGTAATGCAGAGCTGGTCCAGAGAAAGTTTTGTTGGATTGCTCAG
TGCTCATCCTTGCTGAGTGATGTTTTGACAGGCTTGATACACCCATTGTTGTTTAAGGTC
TGTTGAGACAGAACTTGATGACGCAAGTCATCTCTCGAATTGCACTGAAGGTGAGCACAT
ACAATTCTATTTATGAGTTGATCTTCT
■■Homology search results ■■ -
sp_hit_id Q54EQ9
Definition sp|Q54EQ9|Y1586_DICDI Putative uncharacterized protein DDB_G0291608 OS=Dictyostelium discoideum
Align length 37
Score (bit) 30.8
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914431|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_G11.
(567 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54EQ9|Y1586_DICDI Putative uncharacterized protein DDB_G0291... 31 4.9
sp|A1L2E4|RML1B_DANRE RNA methyltransferase-like protein 1B OS=D... 31 4.9
sp|Q06R72|YCF1_JASNU Putative membrane protein ycf1 OS=Jasminum ... 30 8.3
sp|Q10639|PHSG_MYCTU Glycogen phosphorylase OS=Mycobacterium tub... 30 8.3
sp|Q7U078|PHSG_MYCBO Glycogen phosphorylase OS=Mycobacterium bov... 30 8.3

>sp|Q54EQ9|Y1586_DICDI Putative uncharacterized protein DDB_G0291608
OS=Dictyostelium discoideum GN=DDB_G0291608 PE=4 SV=1
Length = 919

Score = 30.8 bits (68), Expect = 4.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3

Query: 102 LPSEPDYNSSPGNFAGSGDMNYTADTPELFYNHHSTS 212
+P P Y SSP G G N+ PE+ Y ++ T+
Sbjct: 672 MPHSPHYGSSPNLNGGKGSNNFLQSIPEVPYGNNLTN 708


>sp|A1L2E4|RML1B_DANRE RNA methyltransferase-like protein 1B
OS=Danio rerio GN=rnmtl1b PE=2 SV=2
Length = 445

Score = 30.8 bits (68), Expect = 4.9
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2

Query: 263 SGLHSVLLYKYAESPDGLGNVQIEVGLHYRSPLIPNL 373
+G HSVLL K L ++ +G H+R P+IPNL
Sbjct: 254 AGCHSVLLTKGCVDIWELKVLRAAMGAHFRLPIIPNL 290


>sp|Q06R72|YCF1_JASNU Putative membrane protein ycf1 OS=Jasminum
nudiflorum GN=ycf1-A PE=3 SV=1
Length = 1933

Score = 30.0 bits (66), Expect = 8.3
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3

Query: 27 KKDVTDSFD-MSGHENVATGDETHDRLPSEP-DYNSSPGNFAGSGDMNYTADTPELFY 194
KKD FD +S + N A D DR P D N N G+GD+ YT TP+ Y
Sbjct: 1361 KKDSRSLFDKLSFNSNTAFFDLLVDRARGMPIDIN----NLTGTGDIPYTEKTPDRKY 1414


>sp|Q10639|PHSG_MYCTU Glycogen phosphorylase OS=Mycobacterium
tuberculosis GN=glgP PE=3 SV=1
Length = 863

Score = 30.0 bits (66), Expect = 8.3
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2

Query: 260 YSGLHSVLLYKYAESPDGLGNVQIEVGLHYRSPLIPNLWVMQSWSRESFVGL 415
YSG +L + +S LG I VGL+YRS W E++ L
Sbjct: 129 YSGGLGILAGDHLKSASDLGVPLIAVGLYYRSGYFRQSLTADGWQHETYPSL 180


>sp|Q7U078|PHSG_MYCBO Glycogen phosphorylase OS=Mycobacterium bovis
GN=glgP PE=3 SV=1
Length = 863

Score = 30.0 bits (66), Expect = 8.3
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2

Query: 260 YSGLHSVLLYKYAESPDGLGNVQIEVGLHYRSPLIPNLWVMQSWSRESFVGL 415
YSG +L + +S LG I VGL+YRS W E++ L
Sbjct: 129 YSGGLGILAGDHLKSASDLGVPLIAVGLYYRSGYFRQSLTADGWQHETYPSL 180


tr_hit_id A9SDN8
Definition tr|A9SDN8|A9SDN8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 121
Score (bit) 46.6
E-value 0.001
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914431|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_G11.
(567 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SDN8|A9SDN8_PHYPA Predicted protein OS=Physcomitrella paten... 47 0.001
tr|A9SDY8|A9SDY8_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.031
tr|A7UXU9|A7UXU9_BACUN Putative uncharacterized protein OS=Bacte... 35 2.9
tr|B6R8E1|B6R8E1_9RHOB Cysteine-rich domain protein OS=Pseudovib... 35 3.7
tr|Q79LN3|Q79LN3_STAAU Biofilm-associated surface protein OS=Sta... 34 6.4
tr|A7I6P4|A7I6P4_METB6 Response regulator receiver OS=Methanoreg... 34 6.4

>tr|A9SDN8|A9SDN8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_164383 PE=4 SV=1
Length = 1271

Score = 46.6 bits (109), Expect = 0.001
Identities = 43/121 (35%), Positives = 53/121 (43%), Gaps = 15/121 (12%)
Frame = +3

Query: 3 STKRWKRGKKDVTDSFDMSGHENVATGDETHDRLPSEPDYNS--------SPGNFAGSGD 158
STKRWK+ KKD ++ E+ A ET PS + S SP S D
Sbjct: 1117 STKRWKKPKKD-----NVENSEHCANAYETGS--PSGAEEPSGIGLVDLLSPDGLGVSID 1169

Query: 159 MN--YTADTPELFYNHHSTSSFP-----GQLRDDSVLPLIDIPASIQSSCTNMQSHPMGW 317
+ Y+A EL YN S+ + P G RDD LP I + I S HPMGW
Sbjct: 1170 NSAIYSAGRTELVYNKSSSLTSPRVLNNGLSRDDGDLPFITLLPGIDS------GHPMGW 1223

Query: 318 E 320
E
Sbjct: 1224 E 1224


>tr|A9SDY8|A9SDY8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_78085 PE=4 SV=1
Length = 1094

Score = 41.6 bits (96), Expect = 0.031
Identities = 42/131 (32%), Positives = 54/131 (41%), Gaps = 9/131 (6%)
Frame = +3

Query: 3 STKRWKRGKKDVTDSFDMSGHENVATGDETHDRLPSEP--DYNSSPGNFAGSGDMN--YT 170
STKRWK+ KKD D+ + + D L D +S G G D + Y+
Sbjct: 941 STKRWKKPKKDNADNSEYCTNAYEIGSSNGADDLSGLGLLDLHSFDG-IGGFMDNSAIYS 999

Query: 171 ADTPELFYNHHSTSSFP-----GQLRDDSVLPLIDIPASIQSSCTNMQSHPMGWEMYR*K 335
ELFYN + + + P G DD LP I +P I + HPM WE K
Sbjct: 1000 TGRTELFYNKNISLTSPRVFSNGISVDDGDLPFITLPLGIDA------GHPMDWEGINAK 1053

Query: 336 WVCITDHHSFL 368
DH S L
Sbjct: 1054 --TFWDHDSHL 1062


>tr|A7UXU9|A7UXU9_BACUN Putative uncharacterized protein
OS=Bacteroides uniformis ATCC 8492 GN=BACUNI_00118 PE=4
SV=1
Length = 263

Score = 35.0 bits (79), Expect = 2.9
Identities = 24/62 (38%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +3

Query: 30 KDVTDSFDMSGHENVATGDETHDRLPSEPDYNSSPGNFAG-SGDMNYTADTPELFYNHHS 206
K V D + H NVA G T P DY S FAG SG T D EL H++
Sbjct: 46 KTVVDKLGFATHHNVAVGSATWACHPDTQDYGSEA--FAGISGGWQVTEDKHELQMRHNN 103

Query: 207 TS 212
S
Sbjct: 104 VS 105


>tr|B6R8E1|B6R8E1_9RHOB Cysteine-rich domain protein OS=Pseudovibrio
sp. JE062 GN=PJE062_5243 PE=4 SV=1
Length = 271

Score = 34.7 bits (78), Expect = 3.7
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3

Query: 87 ETHDRLPSEPDYNSSPGNFAGSGDMNYTADTPELFYNHHSTSSFPGQLRDDSVLPLIDIP 266
E D L + PD+ + G FAG +D P LF + ++ + GQ+ SV+ L I
Sbjct: 123 EVSDLLLAAPDFAQNLGGFAGKVAFLDVSDAPNLFGSQVASRALLGQMEQVSVVDLPQIC 182

Query: 267 AS 272
AS
Sbjct: 183 AS 184


>tr|Q79LN3|Q79LN3_STAAU Biofilm-associated surface protein
OS=Staphylococcus aureus GN=bap PE=4 SV=1
Length = 2276

Score = 33.9 bits (76), Expect = 6.4
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3

Query: 24 GKKDVTDSFDMSGH-ENVATGDETHDRLPSEPDYNSSPGNFAGSGDMNYTADTPELFYNH 200
G D +DS D SG+ +N GD S+ D NS GN +G+GD + + D + N
Sbjct: 2159 GAGDTSDSDDNSGNGDNSGAGDN------SDSDDNSDNGNNSGAGDNSDSDDNSD---NE 2209

Query: 201 HSTSSFPGQLRDDS 242
++SS + DS
Sbjct: 2210 DNSSSNKDSINQDS 2223


>tr|A7I6P4|A7I6P4_METB6 Response regulator receiver OS=Methanoregula
boonei (strain 6A8) GN=Mboo_0887 PE=4 SV=1
Length = 1074

Score = 33.9 bits (76), Expect = 6.4
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +3

Query: 51 DMSGHENVATGDETHDRLPSEPDYNSSPGN-----FAGSGDMNYTADTP 182
D G E + GD+T LP PD PG+ AG G+ + T +TP
Sbjct: 951 DDPGEETLQPGDDTEADLPETPDNEDEPGDEAGEEEAGEGETDETDETP 999