BP914439 [AcEST]

BP914439
Clone id	YMU001_000058_H08
Library	YMU01
Length	552
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000058_H08.
Accession	BP914439
Tissue type	prothallium
Developmental stage	-
Contig ID	CL2748Contig1
Sequence	TTTTTTTTCAGTGCAAAGAACAATTTTATTAAGCTAGGACGAAACTTTACCTTCATAACA CTCACACTTGTACAAAATCGTGTATGAATCCCATTCAGTTACAATGCTCTAGATAGTGAG GCTTTAATGTAAACCCACAAAGCGTATCATAAATTTGCATAATCAAATATGTACCAAAAG AAATCTTGATTATATCTCTTACATCATTTGATCCGACAATGATGACTATATCCTTTATTG GTACAGCAGTTCCGAGATAATGTCTATATCCCTGTTATATGCAGGCTGAGGCTGAACCAA CCGCAGATTTATTGGAGTCATCAGAACCTTTATTAGTATAGCAATAGCAAATCTATGTCC CTATCATGAGCGGGTAGAAGCTGGAGCTATCATGTAACCCATACAAGTCAAAAAGCCTAT CATAATAAAGTGAACAACTAACTACAATTGTGTATCAAATGTAGAATGACCCAGCATGGT CAAGAAAAACAAGAATGAATAAACTCTAAACTGTTTTAAGCCAAAGCATACTCATATGAG CAGTTACAACTG
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP914439\|Adiantum capillus-veneris mRNA, clone: YMU001_000058_H08. (552 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B1C6T5
Definition	tr\|B1C6T5\|B1C6T5_9FIRM Putative uncharacterized protein OS=Anaerofustis stercorihominis DSM 17244
Align length	54
Score (bit)	34.7
E-value	3.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP914439\|Adiantum capillus-veneris mRNA, clone: YMU001_000058_H08. (552 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B1C6T5\|B1C6T5_9FIRM Putative uncharacterized protein OS=Anaer... 35 3.4 >tr\|B1C6T5\|B1C6T5_9FIRM Putative uncharacterized protein OS=Anaerofustis stercorihominis DSM 17244 GN=ANASTE_00432 PE=4 SV=1 Length = 659 Score = 34.7 bits (78), Expect = 3.4 Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 8/54 (14%) Frame = -3 Query: 235 KDIVIIVGSNDVRDIIKISFGTYLIMQI----YD----TLCGFTLKPHYLEHCN 98 K++ + +G N++R+++ + G + ++ YD T+ GFTL P+YL+ N Sbjct: 195 KEVFVTLGDNNIRNVVSVILGHEFVSKMIEVDYDDEPLTVKGFTLSPNYLDRQN 248