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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914440
Clone id YMU001_000058_H09
Library
Length 518
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000058_H09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AAGGCAGTAATACAGCCTATCATAAGTTAGCATCACTACCAGCACTGCAGGGAGAAGAAC
CATGGCCTTCACCATTGGCTAACCACCAAGTGATCTGGCCAAACAGAAGCTCACCAAAAA
ACTCAAAGTTGGTAAAACACCAGAAAAACAAATCAGCCAGACGGGTGAAAAGAGGCTGCC
CAGTGCCTACTTCATGATACAATCGAACGTTTCGACTTTCTCTTCAGAGAAATCTGAGCT
AAATTGCGGGAACCTACAAAAGACAAAGATATGATAAGAAGTCCCTTTAGAGACAGCCTC
AGACAGCTGAACTGTAGACAAATACAGCACAACATTGCTCATATTAACGATTCCCCCATG
AGCAGCTGTGCACATCGACCCATGCTTCTCTCAATGCATCATCACTAAATACCATAGTTG
TCATAGCAATATCCAAATCCATCGTCCACGTCCCATCCCTTTAGCACAGCCAATGCAGCA
CCAGCTTCAGGGTCCCATGGCTTTATACCTTGAAGAGA
■■Homology search results ■■ -
sp_hit_id Q0ZUL9
Definition sp|Q0ZUL9|TLR6_DASNO Toll-like receptor 6 OS=Dasypus novemcinctus
Align length 43
Score (bit) 34.3
E-value 0.36
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914440|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_H09.
         (518 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q0ZUL9|TLR6_DASNO Toll-like receptor 6 OS=Dasypus novemcinctu...    34   0.36 
sp|Q06339|TFC6_YEAST Transcription factor tau 91 kDa subunit OS=...    32   1.4  
sp|Q9EPQ1|TLR1_MOUSE Toll-like receptor 1 OS=Mus musculus GN=Tlr...    31   3.0  
sp|Q15399|TLR1_HUMAN Toll-like receptor 1 OS=Homo sapiens GN=TLR...    31   3.0  
sp|Q5PQ09|F152A_XENLA UPF0326 protein FAM152A OS=Xenopus laevis ...    30   6.8  
sp|Q5XIT6|F152A_RAT UPF0326 protein FAM152A OS=Rattus norvegicus...    30   8.8  
sp|Q5R456|F152A_PONAB UPF0326 protein FAM152A OS=Pongo abelii GN...    30   8.8  
sp|A3QRX8|F152A_PIG UPF0326 protein FAM152A OS=Sus scrofa GN=FAM...    30   8.8  
sp|Q9D291|F152A_MOUSE UPF0326 protein FAM152A OS=Mus musculus GN...    30   8.8  
sp|Q9BSY9|F152A_HUMAN UPF0326 protein FAM152A OS=Homo sapiens GN...    30   8.8  

>sp|Q0ZUL9|TLR6_DASNO Toll-like receptor 6 OS=Dasypus novemcinctus
           GN=TLR6 PE=2 SV=1
          Length = 789

 Score = 34.3 bits (77), Expect = 0.36
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +3

Query: 18  YHKLASLPALQGEEPWPSPLANHQVIWPNRSSPKNSKLVKHQK 146
           YHKL SL A +    WP   + H + W N  +  N KL++ +K
Sbjct: 747 YHKLKSLIAQRTYLEWPKEKSKHGLFWANLRAAINIKLMEEKK 789


>sp|Q06339|TFC6_YEAST Transcription factor tau 91 kDa subunit
           OS=Saccharomyces cerevisiae GN=TFC6 PE=1 SV=1
          Length = 672

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 18/75 (24%), Positives = 29/75 (38%)
 Frame = -3

Query: 372 CTAAHGGIVNMSNVVLYLSTVQLSEAVSKGTSYHIFVFCRFPQFSSDFSEEKVETFDCIM 193
           C A H  +V   + V    T+   E +   T  H+F  C  P  +   ++  + TFD   
Sbjct: 375 CHAPH--LVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFD--- 429

Query: 192 K*ALGSLFSPVWLIC 148
                   SP  ++C
Sbjct: 430 ------FLSPTTVVC 438


>sp|Q9EPQ1|TLR1_MOUSE Toll-like receptor 1 OS=Mus musculus GN=Tlr1
           PE=2 SV=1
          Length = 795

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 12  TAYHKLASLPALQGEEPWPSPLANHQVIWPNRSSPKNSKLV 134
           T YHKL +L + +    WP+    H + W N  +  N KLV
Sbjct: 744 TNYHKLKTLMSRRTYLEWPTEKNKHGLFWANLRASINVKLV 784


>sp|Q15399|TLR1_HUMAN Toll-like receptor 1 OS=Homo sapiens GN=TLR1
           PE=1 SV=3
          Length = 786

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +3

Query: 12  TAYHKLASLPALQGEEPWPSPLANHQVIWPNRSSPKNSKLVKHQK 146
           ++YHKL SL A +    WP   +   + W N  +  N KL +  K
Sbjct: 741 SSYHKLKSLMARRTYLEWPKEKSKRGLFWANLRAAINIKLTEQAK 785


>sp|Q5PQ09|F152A_XENLA UPF0326 protein FAM152A OS=Xenopus laevis
           GN=fam152a PE=2 SV=1
          Length = 192

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 143 EKQISQTGEKRLPSAYFMIQSNVSTFSSEKSELNCG 250
           EK I + G++   +AY ++  N + FSS  SE+ CG
Sbjct: 85  EKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCG 120


>sp|Q5XIT6|F152A_RAT UPF0326 protein FAM152A OS=Rattus norvegicus
           GN=Fam152a PE=2 SV=1
          Length = 194

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 143 EKQISQTGEKRLPSAYFMIQSNVSTFSSEKSELNCG 250
           EK + + G++   +AY ++  N + FSS  SE+ CG
Sbjct: 86  EKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCG 121


>sp|Q5R456|F152A_PONAB UPF0326 protein FAM152A OS=Pongo abelii
           GN=FAM152A PE=2 SV=1
          Length = 194

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 143 EKQISQTGEKRLPSAYFMIQSNVSTFSSEKSELNCG 250
           EK + + G++   +AY ++  N + FSS  SE+ CG
Sbjct: 86  EKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCG 121


>sp|A3QRX8|F152A_PIG UPF0326 protein FAM152A OS=Sus scrofa
           GN=FAM152A PE=2 SV=1
          Length = 194

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 143 EKQISQTGEKRLPSAYFMIQSNVSTFSSEKSELNCG 250
           EK + + G++   +AY ++  N + FSS  SE+ CG
Sbjct: 86  EKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCG 121


>sp|Q9D291|F152A_MOUSE UPF0326 protein FAM152A OS=Mus musculus
           GN=Fam152a PE=2 SV=1
          Length = 194

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 143 EKQISQTGEKRLPSAYFMIQSNVSTFSSEKSELNCG 250
           EK + + G++   +AY ++  N + FSS  SE+ CG
Sbjct: 86  EKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCG 121


>sp|Q9BSY9|F152A_HUMAN UPF0326 protein FAM152A OS=Homo sapiens
           GN=FAM152A PE=2 SV=1
          Length = 194

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 143 EKQISQTGEKRLPSAYFMIQSNVSTFSSEKSELNCG 250
           EK + + G++   +AY ++  N + FSS  SE+ CG
Sbjct: 86  EKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCG 121
tr_hit_id O73655
Definition tr|O73655|O73655_FUGRU Pheromone receptor (Fragment) OS=Fugu rubripes
Align length 101
Score (bit) 38.5
E-value 0.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914440|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_H09.
         (518 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|O73655|O73655_FUGRU Pheromone receptor (Fragment) OS=Fugu rub...    39   0.20 
tr|Q8F633|Q8F633_LEPIN Putative uncharacterized protein OS=Lepto...    33   6.5  
tr|Q72Q37|Q72Q37_LEPIC Putative uncharacterized protein OS=Lepto...    33   6.5  
tr|B6HCE0|B6HCE0_PENCH Pc18g05940 protein OS=Penicillium chrysog...    33   6.5  
tr|B6CJY7|B6CJY7_CERTO Toll-like receptor 1 OS=Cercocebus torqua...    33   8.5  
tr|B6CJY6|B6CJY6_MACMU Toll-like receptor 1 OS=Macaca mulatta PE...    33   8.5  
tr|B3Y611|B3Y611_MACMU Toll-like receptor 1 OS=Macaca mulatta GN...    33   8.5  
tr|B3Y610|B3Y610_MACFA Toll-like receptor 1 OS=Macaca fascicular...    33   8.5  
tr|B0CNH2|B0CNH2_LACBS Predicted protein OS=Laccaria bicolor (st...    33   8.5  
tr|A6RHV2|A6RHV2_BOTFB Predicted protein OS=Botryotinia fuckelia...    33   8.5  

>tr|O73655|O73655_FUGRU Pheromone receptor (Fragment) OS=Fugu
           rubripes GN=Ca10 PE=4 SV=1
          Length = 251

 Score = 38.5 bits (88), Expect = 0.20
 Identities = 28/101 (27%), Positives = 50/101 (49%)
 Frame = -3

Query: 408 LVMMH*EKHGSMCTAAHGGIVNMSNVVLYLSTVQLSEAVSKGTSYHIFVFCRFPQFSSDF 229
           L +    K G   T    G V     V+ L+++Q +  +S      I +   FP  ++ +
Sbjct: 91  LAVFRASKPGGGATLKWFGAVQQRMTVIILTSIQAAICLS-----WILLASPFPHKNTQY 145

Query: 228 SEEKVETFDCIMK*ALGSLFSPVWLICFSGVLPTLSFLVSF 106
           S E++  ++C    A+GS    + L+ + G+L TLSFL++F
Sbjct: 146 SNERI-IYEC----AVGSTVGFILLLSYIGLLATLSFLIAF 181


>tr|Q8F633|Q8F633_LEPIN Putative uncharacterized protein
           OS=Leptospira interrogans GN=LA1479 PE=4 SV=1
          Length = 242

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 21/69 (30%), Positives = 35/69 (50%)
 Frame = +3

Query: 105 RSSPKNSKLVKHQKNKSARRVKRGCPVPTS*YNRTFRLSLQRNLS*IAGTYKRQRYDKKS 284
           R  PK SK+ KH  +K+ ++++       S  NR  RL  +  +S     +K  + D+KS
Sbjct: 171 RRFPKKSKMKKHSTSKTGKKIR-------SLENRVDRLERKLGISHTKKKHKTHKVDRKS 223

Query: 285 L*RQPQTAE 311
           L ++ Q  E
Sbjct: 224 LEKRVQKLE 232


>tr|Q72Q37|Q72Q37_LEPIC Putative uncharacterized protein
           OS=Leptospira interrogans serogroup Icterohaemorrhagiae
           serovar copenhageni GN=LIC_12277 PE=4 SV=1
          Length = 242

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 21/69 (30%), Positives = 35/69 (50%)
 Frame = +3

Query: 105 RSSPKNSKLVKHQKNKSARRVKRGCPVPTS*YNRTFRLSLQRNLS*IAGTYKRQRYDKKS 284
           R  PK SK+ KH  +K+ ++++       S  NR  RL  +  +S     +K  + D+KS
Sbjct: 171 RRFPKKSKMKKHSTSKTGKKIR-------SLENRVDRLERKLGISHTKKKHKTHKVDRKS 223

Query: 285 L*RQPQTAE 311
           L ++ Q  E
Sbjct: 224 LEKRVQKLE 232


>tr|B6HCE0|B6HCE0_PENCH Pc18g05940 protein OS=Penicillium
           chrysogenum Wisconsin 54-1255 GN=Pc18g05940 PE=4 SV=1
          Length = 444

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 42  ALQGEEPWPSPLANHQVIWPNRSSPKNSKLVKHQKNKSARRVK 170
           +L  E   P+P      IWP R+ P N++ V+H ++ S  R K
Sbjct: 207 SLCSEFSTPAPWVEPDAIWPPRTIPSNTRTVRHLRDSSPPRPK 249


>tr|B6CJY7|B6CJY7_CERTO Toll-like receptor 1 OS=Cercocebus torquatus
           atys PE=2 SV=1
          Length = 786

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 12  TAYHKLASLPALQGEEPWPSPLANHQVIWPNRSSPKNSKLVKHQK 146
           ++YHKL +L A +    WP   + H + W N  +  N KL +  K
Sbjct: 741 SSYHKLKNLMARRTYLEWPKEKSKHGLFWANLRAAINIKLTEQAK 785


>tr|B6CJY6|B6CJY6_MACMU Toll-like receptor 1 OS=Macaca mulatta PE=2
           SV=1
          Length = 786

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 12  TAYHKLASLPALQGEEPWPSPLANHQVIWPNRSSPKNSKLVKHQK 146
           ++YHKL +L A +    WP   + H + W N  +  N KL +  K
Sbjct: 741 SSYHKLKNLMARRTYLEWPKEKSKHGLFWANLRAAINIKLTEQAK 785


>tr|B3Y611|B3Y611_MACMU Toll-like receptor 1 OS=Macaca mulatta
           GN=TLR1 PE=2 SV=1
          Length = 786

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 12  TAYHKLASLPALQGEEPWPSPLANHQVIWPNRSSPKNSKLVKHQK 146
           ++YHKL +L A +    WP   + H + W N  +  N KL +  K
Sbjct: 741 SSYHKLKNLMARRTYLEWPKEKSKHGLFWANLRAAINIKLTEQAK 785


>tr|B3Y610|B3Y610_MACFA Toll-like receptor 1 OS=Macaca fascicularis
           GN=TLR1 PE=2 SV=1
          Length = 786

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 12  TAYHKLASLPALQGEEPWPSPLANHQVIWPNRSSPKNSKLVKHQK 146
           ++YHKL +L A +    WP   + H + W N  +  N KL +  K
Sbjct: 741 SSYHKLKNLMARRTYLEWPKEKSKHGLFWANLRAAINIKLTEQAK 785


>tr|B0CNH2|B0CNH2_LACBS Predicted protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_301409 PE=4 SV=1
          Length = 474

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = +1

Query: 310 NCRQIQHNIAHINDSPMSSCAHRPMLLSMHHH*IP*LS*QYPNPSSTSHPFSTANAAPAS 489
           N R   HN    N++  ++       ++ + +  P    QYP+P  TS      NA P+S
Sbjct: 240 NARGGSHNATRSNNAASATNKRAARNVNSNRNPTPLAIEQYPSPHETSSRRDAYNAVPSS 299

Query: 490 GSHGFIP 510
            SH  +P
Sbjct: 300 SSHPSLP 306


>tr|A6RHV2|A6RHV2_BOTFB Predicted protein OS=Botryotinia fuckeliana
           (strain B05.10) GN=BC1G_00023 PE=4 SV=1
          Length = 198

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = +1

Query: 265 KDMIRSPFRDSLRQLNCRQIQHNIAHINDSPMSSCAHRPMLLSMHHH 405
           K M R+P   +LR L C  I  N+ H N SPM +       LS +HH
Sbjct: 65  KKMFRTPMASTLRSLQCNPISCNL-HCNTSPMPN-------LSTNHH 103