BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914445|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_A05.
         (468 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P16835|UL125_HCMVA Uncharacterized protein UL125 OS=Human cyt...    32   1.8  
sp|Q920C4|MS4A3_MOUSE Membrane-spanning 4-domains subfamily A me...    31   3.1  
sp|A5CXJ7|TIG_VESOH Trigger factor OS=Vesicomyosocius okutanii s...    30   6.8  
sp|Q8BSM7|LAT3_MOUSE Large neutral amino acids transporter small...    30   6.9  
sp|Q09203|SRA1_CAEEL Serpentine receptor class alpha-1 OS=Caenor...    29   9.1  
sp|O03847|NU1M_LATCH NADH-ubiquinone oxidoreductase chain 1 OS=L...    29   9.1  

>sp|P16835|UL125_HCMVA Uncharacterized protein UL125 OS=Human
           cytomegalovirus (strain AD169) GN=UL125 PE=4 SV=1
          Length = 102

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -1

Query: 159 SLQSIFNTTFFKGTQQKPCPHQTRFLNLNFTSEGLSILFLAVTFTIPPS 13
           S+  +F TT F G     CP +T   ++ F  +G+S +    T+T PPS
Sbjct: 1   SITWLFATTLFIGYMPIHCPSETDTDSV-FLQDGVSFIIYKFTYTTPPS 48


>sp|Q920C4|MS4A3_MOUSE Membrane-spanning 4-domains subfamily A
           member 3 OS=Mus musculus GN=Ms4a3 PE=2 SV=1
          Length = 213

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = -1

Query: 162 LSLQSIFNTTFFKGTQQKPCPHQTRFLNLNFTSEGLSILFLAVT 31
           LS+   FNT  FKG Q  P P     ++L  +S+GL  L L +T
Sbjct: 116 LSVHLAFNTQAFKGCQSSPSPDVC--ISLGSSSDGLVSLMLILT 157


>sp|A5CXJ7|TIG_VESOH Trigger factor OS=Vesicomyosocius okutanii
           subsp. Calyptogena okutanii (strain HA) GN=tig PE=3 SV=1
          Length = 429

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
 Frame = -2

Query: 386 VLKSSRAMLDLTYYKEGEIQKL--------INVNDIFSP----LCDQKRD*KGEEKLCTI 243
           V  SSR +LDLT+ K+  + KL        IN+N+I SP    L +      GE+ +  +
Sbjct: 205 VAYSSRVVLDLTFPKDYYMDKLASKDVTFEININEIASPKELKLDETFAKKFGEKNMNAL 264

Query: 242 HIQHVLQW-LKVSSIIV*LKRTPPFS*NSLYNPYSIPP-SLKGHNRNLALIKRD 87
            +    Q  ++V   I  L +   F   +  NP+++P  S+    +NL    +D
Sbjct: 265 RVSMKEQMRVEVDGRIGHLNKNAIFDKLTTANPFNVPQHSIDNEAQNLFKAMQD 318


>sp|Q8BSM7|LAT3_MOUSE Large neutral amino acids transporter small
           subunit 3 OS=Mus musculus GN=Slc43a1 PE=1 SV=1
          Length = 564

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 10/89 (11%)
 Frame = -1

Query: 240 YTACASMAQGVINHSVIEAYTAIFMKLSLQSIF----------NTTFFKGTQQKPCPHQT 91
           + AC ++ + +   +V+  + ++ + L  +  +          NTT  +  Q   C  Q 
Sbjct: 14  WMACTAVVENLFFSAVLLGWASLLIMLKKEGFYSSLCPAENRTNTTQDEQHQWTSCDQQE 73

Query: 90  RFLNLNFTSEGLSILFLAVTFTIPPSIMM 4
           + LNL FT       FL    T+P  I+M
Sbjct: 74  KMLNLGFTIGS----FLLSATTLPLGILM 98


>sp|Q09203|SRA1_CAEEL Serpentine receptor class alpha-1
           OS=Caenorhabditis elegans GN=sra-1 PE=2 SV=1
          Length = 331

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = -1

Query: 261 REALYNTYTAC-ASMAQGVINHSVIEAYTAIFMKLSLQSIFNTTFFK 124
           REA+Y+T+T C   MAQ V    ++ +   + ++ ++ +I  TTF+K
Sbjct: 229 REAIYSTHTICVVCMAQFVT--MLVYSSGVLILRCNMSNILLTTFYK 273


>sp|O03847|NU1M_LATCH NADH-ubiquinone oxidoreductase chain 1
           OS=Latimeria chalumnae GN=MT-ND1 PE=3 SV=1
          Length = 323

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = -1

Query: 183 YTAIFMKLSLQSIFNTTFFKGTQQKPCPHQTRFLNLNFTSEGLSILFLAVTFTIP 19
           + A +  + L +  +T  F G    P   +   +NL   +  LS+LFL V  + P
Sbjct: 229 FLAEYANILLMNTLSTILFMGAMHNPITPELTSINLMIKASALSMLFLWVRASYP 283

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914445|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_A05.
         (468 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7P1T2|A7P1T2_VITVI Chromosome chr19 scaffold_4, whole genome...    38   0.22 
tr|A9NRM0|A9NRM0_PICSI Putative uncharacterized protein OS=Picea...    36   1.1  

>tr|A7P1T2|A7P1T2_VITVI Chromosome chr19 scaffold_4, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00027743001
           PE=4 SV=1
          Length = 319

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 13/31 (41%), Positives = 25/31 (80%)
 Frame = +2

Query: 2   RIMIDGGIVKVTAKKSMDNPSEVKFRFKNRV 94
           R++ DG ++++TA+++ D+P  V+F FKNR+
Sbjct: 288 RMLADGALLQITARRNADSPENVEFLFKNRI 318


>tr|A9NRM0|A9NRM0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 338

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 14/31 (45%), Positives = 24/31 (77%)
 Frame = +2

Query: 2   RIMIDGGIVKVTAKKSMDNPSEVKFRFKNRV 94
           R+++DG ++++TAK++    S VKF FKNR+
Sbjct: 308 RMLVDGALMQITAKRTGMGSSGVKFMFKNRI 338