BP914448
Clone id YMU001_000059_A08
Library
Length 525
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000059_A08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTGCTAGCAAATAGCGCAACATCAGCATAGTGTCATCGCACTCATTCTTGTATCTGCCCT
TGAACCACTTTTGTCTCAGCCTTTGTATCAAATGCTCTACCACCAAACCATCATGGTCAT
ATGCTCTCCTAGTTCTCATCCTATCAATGGCATTCTTCACCATCCCAGTGGTAAAGAAGG
TACTAGTGACTGGACATGGCTCTAGAGGGTCTGGTAATGGTGGTTGCCCAGGTACTATAT
ATAATGATGCTGCATACTAACCCCAAATCTCGGGAGAAGTTATCACTGGAGGAGGTGAGT
ACTCATGGAAGATACGCCAGGCCTCACCTGAATCTCAACACAAAAAGAGCTGATACAAAT
CACATTCCATCTGGGCTAAAAAGGCCCGCTTCTTCTGTCGCATTGAACGCCGGAGGGCAA
TTCAAGACTATCTATATGTAATGACTCCAAGTATAAGCTCGCTCTGAATTTGAACTCTCA
TCTCTCTGCACTCCTCATCATACCAACTATTCTGAGGCATATTCC
■■Homology search results ■■ -
sp_hit_id Q8NGZ5
Definition sp|Q8NGZ5|OR2G2_HUMAN Olfactory receptor 2G2 OS=Homo sapiens
Align length 32
Score (bit) 30.8
E-value 4.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914448|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_A08.
(525 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8NGZ5|OR2G2_HUMAN Olfactory receptor 2G2 OS=Homo sapiens GN=... 31 4.1
sp|Q9ESQ4|NMUR2_RAT Neuromedin-U receptor 2 OS=Rattus norvegicus... 30 7.0

>sp|Q8NGZ5|OR2G2_HUMAN Olfactory receptor 2G2 OS=Homo sapiens
GN=OR2G2 PE=2 SV=1
Length = 317

Score = 30.8 bits (68), Expect = 4.1
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2

Query: 41 LILVSALEPLLSQPLYQMLYHQTIMVICSPSS 136
+ILVS LEP L P+Y L H + + C SS
Sbjct: 48 IILVSRLEPKLHMPMYFFLSHLSFLYRCFTSS 79


>sp|Q9ESQ4|NMUR2_RAT Neuromedin-U receptor 2 OS=Rattus norvegicus
GN=Nmur2 PE=1 SV=2
Length = 395

Score = 30.0 bits (66), Expect = 7.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3

Query: 93 CSTTKPSWSYALLVLILSMAFFTIPV 170
C+ TKP W Y L++ S F+ +P+
Sbjct: 196 CTVTKPMWVYNLIIQATSFLFYILPM 221


tr_hit_id A1JQC5
Definition tr|A1JQC5|A1JQC5_YERE8 Sensor protein OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081)
Align length 31
Score (bit) 34.3
E-value 3.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914448|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_A08.
(525 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A1JQC5|A1JQC5_YERE8 Sensor protein OS=Yersinia enterocolitica... 34 3.9
tr|Q9KKI7|Q9KKI7_YEREN Sensor protein OS=Yersinia enterocolitica... 34 3.9
tr|Q93NL5|Q93NL5_YEREN Sensor protein OS=Yersinia enterocolitica... 34 3.9
tr|A1JQF6|A1JQF6_YERE8 Sensor protein OS=Yersinia enterocolitica... 34 5.1
tr|B4M1U1|B4M1U1_DROVI GJ18786 OS=Drosophila virilis GN=GJ18786 ... 33 6.6
tr|A4IFI3|A4IFI3_BOVIN SHF protein (Fragment) OS=Bos taurus GN=S... 33 6.7
tr|Q8N9I8|Q8N9I8_HUMAN cDNA FLJ37072 fis, clone BRACE2015412, we... 33 8.8

>tr|A1JQC5|A1JQC5_YERE8 Sensor protein OS=Yersinia enterocolitica
serotype O:8 / biotype 1B (strain 8081) GN=ysrS PE=3
SV=1
Length = 789

Score = 34.3 bits (77), Expect = 3.9
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = -2

Query: 302 VLTSSSDNFSRDLGLVCSIIIYSTWATTITR 210
+LTS+S +F++ GL+ S+ I++TW T+TR
Sbjct: 104 LLTSTSISFAQTHGLISSVPIFTTWPLTVTR 134


>tr|Q9KKI7|Q9KKI7_YEREN Sensor protein OS=Yersinia enterocolitica
GN=ysrS PE=4 SV=1
Length = 791

Score = 34.3 bits (77), Expect = 3.9
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = -2

Query: 302 VLTSSSDNFSRDLGLVCSIIIYSTWATTITR 210
+LTS+S +F++ GL+ S+ I++TW T+TR
Sbjct: 106 LLTSTSISFAQTHGLISSVPIFTTWPLTVTR 136


>tr|Q93NL5|Q93NL5_YEREN Sensor protein OS=Yersinia enterocolitica
GN=ysrS PE=4 SV=1
Length = 791

Score = 34.3 bits (77), Expect = 3.9
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = -2

Query: 302 VLTSSSDNFSRDLGLVCSIIIYSTWATTITR 210
+LTS+S +F++ GL+ S+ I++TW T+TR
Sbjct: 106 LLTSTSISFAQTHGLISSVPIFTTWPLTVTR 136


>tr|A1JQF6|A1JQF6_YERE8 Sensor protein OS=Yersinia enterocolitica
serotype O:8 / biotype 1B (strain 8081) GN=YE3579 PE=3
SV=1
Length = 785

Score = 33.9 bits (76), Expect = 5.1
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -2

Query: 302 VLTSSSDNFSRDLGLVCSIIIYSTWATTITR 210
+LTS+S F++ GL SI ++STW T+TR
Sbjct: 105 LLTSTSSAFAQAKGLASSIPMFSTWPVTVTR 135


>tr|B4M1U1|B4M1U1_DROVI GJ18786 OS=Drosophila virilis GN=GJ18786
PE=4 SV=1
Length = 1270

Score = 33.5 bits (75), Expect = 6.6
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2

Query: 8 QIAQHQHSVIALILVSALEPLLSQPLYQMLYHQTIMVICSPSSH 139
Q++Q Q+ ++ + AL L+++ LY+ +H T+ V CS H
Sbjct: 229 QVSQQQNCLLLSPIALALHTLVAEFLYEQNFHYTLSVFCSEMPH 272


>tr|A4IFI3|A4IFI3_BOVIN SHF protein (Fragment) OS=Bos taurus GN=SHF
PE=2 SV=1
Length = 255

Score = 33.5 bits (75), Expect = 6.7
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1

Query: 259 NPKSREKLSLEEVSTHGRYARPHLNLNTKRADTNHIPSGLKRPASSV 399
NPKS + LS+E S G + P L L + H P+ + PA +V
Sbjct: 199 NPKSAKPLSMEPSSPLGEWTDPALPLENQLVSRGHQPNRCREPAPAV 245


>tr|Q8N9I8|Q8N9I8_HUMAN cDNA FLJ37072 fis, clone BRACE2015412,
weakly similar to Shb=Src homology 2 protein OS=Homo
sapiens GN=SHF PE=2 SV=1
Length = 212

Score = 33.1 bits (74), Expect = 8.8
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1

Query: 259 NPKSREKLSLEEVSTHGRYARPHLNLNTKRADTNHIPSGLKRPASSV 399
NPKS + LS+E S G + P L L + H P+ + PA +V
Sbjct: 156 NPKSAKPLSMEPSSPLGEWTDPALPLENQLVSRGHQPNRRREPAPAV 202